Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10p09r
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    27   0.13 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    27   0.13 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.51 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.51 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.51 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.51 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.51 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.51 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.51 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    25   0.51 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.51 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.3  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = -2

Query: 578 TRIQSICSIYL-FIIHYCSLLFKQYILNSDELYFKI 474
           T +Q  CS+ L F+ ++ ++LF++ +LN+ ++  KI
Sbjct: 71  TILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSKI 106


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = -2

Query: 578 TRIQSICSIYL-FIIHYCSLLFKQYILNSDELYFKI 474
           T +Q  CS+ L F+ ++ ++LF++ +LN+ ++  KI
Sbjct: 67  TILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSKI 102


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 314 SNNESTVESGLALPLALLTSMVDGNHSPPGRP 409
           SN+ +T  SGL  PL++ T       SPPG+P
Sbjct: 133 SNSNATKSSGLTSPLSVST-------SPPGKP 157


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 314 SNNESTVESGLALPLALLTSMVDGNHSPPGRP 409
           SN+ +T  SGL  PL++ T       SPPG+P
Sbjct: 133 SNSNATKSSGLTSPLSVST-------SPPGKP 157


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 314 SNNESTVESGLALPLALLTSMVDGNHSPPGRP 409
           SN+ +T  SGL  PL++ T       SPPG+P
Sbjct: 133 SNSNATKSSGLTSPLSVST-------SPPGKP 157


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 314 SNNESTVESGLALPLALLTSMVDGNHSPPGRP 409
           SN+ +T  SGL  PL++ T       SPPG+P
Sbjct: 133 SNSNATKSSGLTSPLSVST-------SPPGKP 157


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 314 SNNESTVESGLALPLALLTSMVDGNHSPPGRP 409
           SN+ +T  SGL  PL++ T       SPPG+P
Sbjct: 133 SNSNATKSSGLTSPLSVST-------SPPGKP 157


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 314 SNNESTVESGLALPLALLTSMVDGNHSPPGRP 409
           SN+ +T  SGL  PL++ T       SPPG+P
Sbjct: 89  SNSNATKSSGLTSPLSVST-------SPPGKP 113


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 314 SNNESTVESGLALPLALLTSMVDGNHSPPGRP 409
           SN+ +T  SGL  PL++ T       SPPG+P
Sbjct: 133 SNSNATKSSGLTSPLSVST-------SPPGKP 157


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 314 SNNESTVESGLALPLALLTSMVDGNHSPPGRP 409
           SN+ +T  SGL  PL++ T       SPPG+P
Sbjct: 133 SNSNATKSSGLTSPLSVST-------SPPGKP 157


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 314 SNNESTVESGLALPLALLTSMVDGNHSPPGRP 409
           SN+ +T  SGL  PL++ T       SPPG+P
Sbjct: 133 SNSNATKSSGLTSPLSVST-------SPPGKP 157


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 562 YALFICSLFIIV 527
           Y  F CSLFI+V
Sbjct: 49  YVTFFCSLFIVV 60


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -1

Query: 207 CHVAHTAHNINDVYGVN 157
           C + +T  + ND++G++
Sbjct: 187 CELKNTVDDFNDIFGIS 203


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +2

Query: 146 SFVMFTPYTSLML 184
           SF++FT Y+SL+L
Sbjct: 281 SFLLFTLYSSLLL 293


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +2

Query: 146 SFVMFTPYTSLML 184
           SF++FT Y+SL+L
Sbjct: 207 SFLLFTLYSSLLL 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,767
Number of Sequences: 336
Number of extensions: 4394
Number of successful extensions: 27
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)