Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10p07f
         (535 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001712-1|AAN71467.1|  151|Drosophila melanogaster RE67710p pro...    99   4e-21
AE014297-766|AAN13389.1|  141|Drosophila melanogaster CG31460-PA...    99   4e-21
BT003301-1|AAO25061.1|  348|Drosophila melanogaster GH10666p pro...    28   7.0  
AE014296-3419|AAF51641.1|  340|Drosophila melanogaster CG3698-PA...    28   7.0  
AE014296-737|AAN11577.1|  406|Drosophila melanogaster CG32257-PA...    28   9.2  

>BT001712-1|AAN71467.1|  151|Drosophila melanogaster RE67710p
           protein.
          Length = 151

 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 42/127 (33%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
 Frame = +2

Query: 95  NSATSFVLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNLETILF 274
           ++  S ++S +L++++F  ++        S + ++ GGYL S +F+  +T V N E ++F
Sbjct: 19  STVVSSIISGLLSIVLFGTLRFCSEWFNDSQLRVLLGGYLFSWVFILSLTCVSNAEMVVF 78

Query: 275 GKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAVVAPQP 451
           G+ FQ KL PE++  + +++ AAG+VHR+C TT ++F ++ +Y++N++S K Y+V  P  
Sbjct: 79  GQDFQAKLLPEIIFCLSLTVAAAGLVHRVCATTSVLFSLVGLYFLNRISTKYYSVQVPSV 138

Query: 452 AAVKSRR 472
            A  +R+
Sbjct: 139 DAPTTRK 145


>AE014297-766|AAN13389.1|  141|Drosophila melanogaster CG31460-PA
           protein.
          Length = 141

 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 42/127 (33%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
 Frame = +2

Query: 95  NSATSFVLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNLETILF 274
           ++  S ++S +L++++F  ++        S + ++ GGYL S +F+  +T V N E ++F
Sbjct: 9   STVVSSIISGLLSIVLFGTLRFCSEWFNDSQLRVLLGGYLFSWVFILSLTCVSNAEMVVF 68

Query: 275 GKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAVVAPQP 451
           G+ FQ KL PE++  + +++ AAG+VHR+C TT ++F ++ +Y++N++S K Y+V  P  
Sbjct: 69  GQDFQAKLLPEIIFCLSLTVAAAGLVHRVCATTSVLFSLVGLYFLNRISTKYYSVQVPSV 128

Query: 452 AAVKSRR 472
            A  +R+
Sbjct: 129 DAPTTRK 135


>BT003301-1|AAO25061.1|  348|Drosophila melanogaster GH10666p
           protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 110 FVLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYL-GSLMFMFFV 241
           FVL S++  LI   + M    L+   +T++F GYL   L+F++ V
Sbjct: 258 FVLYSLVNTLIVGLLHMTSDYLLKPLLTMLFNGYLQPPLIFLYNV 302


>AE014296-3419|AAF51641.1|  340|Drosophila melanogaster CG3698-PA
           protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 110 FVLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYL-GSLMFMFFV 241
           FVL S++  LI   + M    L+   +T++F GYL   L+F++ V
Sbjct: 250 FVLYSLVNTLIVGLLHMTSDYLLKPLLTMLFNGYLQPPLIFLYNV 294


>AE014296-737|AAN11577.1|  406|Drosophila melanogaster CG32257-PA
           protein.
          Length = 406

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 18/74 (24%), Positives = 37/74 (50%)
 Frame = +2

Query: 113 VLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNLETILFGKAFQL 292
           V+ ++LT+ + S +  Y+ +++ +   +    +  S+    F   +GN  T L G  F  
Sbjct: 310 VVRTLLTIFVASSINDYERKIVTALRDVPSRAW--SIEVQRFSEQLGNDTTALSGSGFFY 367

Query: 293 KLPEVVLSMGISLI 334
               +VL+MG ++I
Sbjct: 368 LTRSLVLAMGTTII 381


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,721,900
Number of Sequences: 53049
Number of extensions: 493950
Number of successful extensions: 1002
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)