Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10p02f
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128469-1|AAM75062.1|  300|Drosophila melanogaster RE22593p pro...   149   4e-36
AE014134-1369|AAS64653.1|  300|Drosophila melanogaster CG7231-PC...   149   4e-36
AE014134-1368|AAF52583.2|  303|Drosophila melanogaster CG7231-PA...   146   2e-35
AE014134-1367|AAF52582.2|  358|Drosophila melanogaster CG7231-PB...   146   2e-35
BT016114-1|AAV36999.1|  949|Drosophila melanogaster LD10780p pro...    30   2.8  
AE013599-1182|AAF58744.1|  949|Drosophila melanogaster CG12325-P...    30   2.8  
AY061125-1|AAL28673.1| 1637|Drosophila melanogaster LD10743p pro...    29   3.8  
AL050231-2|CAB65850.1| 1624|Drosophila melanogaster EG:BACR37P7....    29   3.8  
AE014298-5|AAF45487.2| 1637|Drosophila melanogaster CG2995-PA pr...    29   3.8  

>AY128469-1|AAM75062.1|  300|Drosophila melanogaster RE22593p
           protein.
          Length = 300

 Score =  149 bits (360), Expect = 4e-36
 Identities = 78/154 (50%), Positives = 102/154 (66%), Gaps = 4/154 (2%)
 Frame = +3

Query: 159 NLTTVTWAHAVNNKTYLEAALA--SEVAMLEADIVLGHLTGHDGPPIPIMAHPPATTSDL 332
           NLT +TWAHAVN++  L+  L   S +  +EADIVLG L G DG  +PIMAHPPA  SDL
Sbjct: 8   NLTAITWAHAVNSQQLLDEVLTETSGIDFIEADIVLGKLNG-DGEDMPIMAHPPANVSDL 66

Query: 333 SLAEFLSTVAQYNNVNNKQK-GVKLDFKSIEVFSKSQELIAPYSKPQVTFPLWLNADILP 509
           +L+EFL+ +  +N  +  QK GVKLDFKSIEVF  S +++        T+P+W+NADIL 
Sbjct: 67  TLSEFLNQIINFNRDHEDQKKGVKLDFKSIEVFEGSLDILDVNIPNPTTYPVWINADILS 126

Query: 510 GPVKAT-TTPVDPIKFIELGANHPRAVLCMGWTT 608
           GPV+   T PVD  +F      + +AVL +GWTT
Sbjct: 127 GPVEQNRTVPVDADRFFAGCMRYKQAVLSIGWTT 160


>AE014134-1369|AAS64653.1|  300|Drosophila melanogaster CG7231-PC,
           isoform C protein.
          Length = 300

 Score =  149 bits (360), Expect = 4e-36
 Identities = 78/154 (50%), Positives = 102/154 (66%), Gaps = 4/154 (2%)
 Frame = +3

Query: 159 NLTTVTWAHAVNNKTYLEAALA--SEVAMLEADIVLGHLTGHDGPPIPIMAHPPATTSDL 332
           NLT +TWAHAVN++  L+  L   S +  +EADIVLG L G DG  +PIMAHPPA  SDL
Sbjct: 8   NLTAITWAHAVNSQQLLDEVLTETSGIDFIEADIVLGKLNG-DGEDMPIMAHPPANVSDL 66

Query: 333 SLAEFLSTVAQYNNVNNKQK-GVKLDFKSIEVFSKSQELIAPYSKPQVTFPLWLNADILP 509
           +L+EFL+ +  +N  +  QK GVKLDFKSIEVF  S +++        T+P+W+NADIL 
Sbjct: 67  TLSEFLNQIINFNRDHEDQKKGVKLDFKSIEVFEGSLDILDVNIPNPTTYPVWINADILS 126

Query: 510 GPVKAT-TTPVDPIKFIELGANHPRAVLCMGWTT 608
           GPV+   T PVD  +F      + +AVL +GWTT
Sbjct: 127 GPVEQNRTVPVDADRFFAGCMRYKQAVLSIGWTT 160


>AE014134-1368|AAF52583.2|  303|Drosophila melanogaster CG7231-PA,
           isoform A protein.
          Length = 303

 Score =  146 bits (355), Expect = 2e-35
 Identities = 79/157 (50%), Positives = 103/157 (65%), Gaps = 7/157 (4%)
 Frame = +3

Query: 159 NLTTVTWAHAVNNKTYLEAALA--SEVAMLEADIVLGHLTGHDGPPIPIMAHPPATTSDL 332
           NLT +TWAHAVN++  L+  L   S +  +EADIVLG L G DG  +PIMAHPPA  SDL
Sbjct: 8   NLTAITWAHAVNSQQLLDEVLTETSGIDFIEADIVLGKLNG-DGEDMPIMAHPPANVSDL 66

Query: 333 SLAEFLSTVAQYNNVNNKQ-KGVKLDFKSIEVFSKSQELI---APYSKPQVTFPLWLNAD 500
           +L+EFL+ +  +N  +  Q KGVKLDFKSIEVF  S +++    P      T+P+W+NAD
Sbjct: 67  TLSEFLNQIINFNRDHEDQKKGVKLDFKSIEVFEGSLDILDVNIPNVSLPTTYPVWINAD 126

Query: 501 ILPGPVKAT-TTPVDPIKFIELGANHPRAVLCMGWTT 608
           IL GPV+   T PVD  +F      + +AVL +GWTT
Sbjct: 127 ILSGPVEQNRTVPVDADRFFAGCMRYKQAVLSIGWTT 163


>AE014134-1367|AAF52582.2|  358|Drosophila melanogaster CG7231-PB,
           isoform B protein.
          Length = 358

 Score =  146 bits (355), Expect = 2e-35
 Identities = 79/157 (50%), Positives = 103/157 (65%), Gaps = 7/157 (4%)
 Frame = +3

Query: 159 NLTTVTWAHAVNNKTYLEAALA--SEVAMLEADIVLGHLTGHDGPPIPIMAHPPATTSDL 332
           NLT +TWAHAVN++  L+  L   S +  +EADIVLG L G DG  +PIMAHPPA  SDL
Sbjct: 63  NLTAITWAHAVNSQQLLDEVLTETSGIDFIEADIVLGKLNG-DGEDMPIMAHPPANVSDL 121

Query: 333 SLAEFLSTVAQYNNVNNKQ-KGVKLDFKSIEVFSKSQELI---APYSKPQVTFPLWLNAD 500
           +L+EFL+ +  +N  +  Q KGVKLDFKSIEVF  S +++    P      T+P+W+NAD
Sbjct: 122 TLSEFLNQIINFNRDHEDQKKGVKLDFKSIEVFEGSLDILDVNIPNVSLPTTYPVWINAD 181

Query: 501 ILPGPVKAT-TTPVDPIKFIELGANHPRAVLCMGWTT 608
           IL GPV+   T PVD  +F      + +AVL +GWTT
Sbjct: 182 ILSGPVEQNRTVPVDADRFFAGCMRYKQAVLSIGWTT 218


>BT016114-1|AAV36999.1|  949|Drosophila melanogaster LD10780p
           protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +3

Query: 267 LTGHDGPPIPIMAHPPATTSDLSLAEFLSTVAQYNNVNNKQKGVKLDFKS---IEVFSKS 437
           ++GH+GP + I   P AT+S L    +  TV  +N + +  +   +D  S      FS S
Sbjct: 517 ISGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPS 576

Query: 438 QELIA 452
            E IA
Sbjct: 577 GEEIA 581


>AE013599-1182|AAF58744.1|  949|Drosophila melanogaster CG12325-PA
           protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +3

Query: 267 LTGHDGPPIPIMAHPPATTSDLSLAEFLSTVAQYNNVNNKQKGVKLDFKS---IEVFSKS 437
           ++GH+GP + I   P AT+S L    +  TV  +N + +  +   +D  S      FS S
Sbjct: 517 ISGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPS 576

Query: 438 QELIA 452
            E IA
Sbjct: 577 GEEIA 581


>AY061125-1|AAL28673.1| 1637|Drosophila melanogaster LD10743p protein.
          Length = 1637

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 422  SVF*EPGADRSLQ*TSGDFPIMVKCRHS 505
            +V  + GAD ++Q   GD P+ + CRHS
Sbjct: 1250 TVLLQSGADCNVQNVEGDTPLHIACRHS 1277


>AL050231-2|CAB65850.1| 1624|Drosophila melanogaster EG:BACR37P7.2
            protein.
          Length = 1624

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 422  SVF*EPGADRSLQ*TSGDFPIMVKCRHS 505
            +V  + GAD ++Q   GD P+ + CRHS
Sbjct: 1237 TVLLQSGADCNVQNVEGDTPLHIACRHS 1264


>AE014298-5|AAF45487.2| 1637|Drosophila melanogaster CG2995-PA
            protein.
          Length = 1637

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 422  SVF*EPGADRSLQ*TSGDFPIMVKCRHS 505
            +V  + GAD ++Q   GD P+ + CRHS
Sbjct: 1250 TVLLQSGADCNVQNVEGDTPLHIACRHS 1277


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,705,392
Number of Sequences: 53049
Number of extensions: 525251
Number of successful extensions: 1426
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)