Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10p02f
(610 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 2.3
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 22 5.4
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 22 5.4
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 7.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 7.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 9.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.4
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/63 (20%), Positives = 27/63 (42%)
Frame = -1
Query: 196 LLTACAQVTVVKFFIVSSSQVTNVAVTNRIMTRNIVI*YIFFVLIKELCIHETTRHLSAG 17
+L + +V +V + + +AV + RN+ +I + + +L + SA
Sbjct: 65 ILVTLIVLAIVNVMVVLGNVLVILAVYHTSKLRNVTNMFIVSLAVADLMVGLAVLPFSAT 124
Query: 16 WRV 8
W V
Sbjct: 125 WEV 127
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 543 DQRGLLSLLLDQVECRHLTIMGK 475
D+ +L LL DQ++ R ++MGK
Sbjct: 91 DEDIMLGLLPDQLQERAQSVMGK 113
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 543 DQRGLLSLLLDQVECRHLTIMGK 475
D+ +L LL DQ++ R ++MGK
Sbjct: 91 DEDIMLGLLPDQLQERAQSVMGK 113
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3
Query: 477 FPLWLNADILPGPVKATTT 533
F WL D +PG V T
Sbjct: 219 FSFWLGLDAIPGRVALLVT 237
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 66 KTKKIY*ITMFLVIILFVTATFVT 137
+ + Y T+F+ I+ VT++F+T
Sbjct: 298 RDRAFYFTTVFIPGIILVTSSFIT 321
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 66 KTKKIY*ITMFLVIILFVTATFVT 137
+ + Y T+F+ I+ VT++F+T
Sbjct: 267 RDRAFYFTTVFIPGIILVTSSFIT 290
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 66 KTKKIY*ITMFLVIILFVTATFVT 137
+ + Y T+F+ I+ VT++F+T
Sbjct: 318 RDRAFYFTTVFIPGIILVTSSFIT 341
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 66 KTKKIY*ITMFLVIILFVTATFVT 137
+ + Y T+F+ I+ VT++F+T
Sbjct: 267 RDRAFYFTTVFIPGIILVTSSFIT 290
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -1
Query: 274 PVRCPKTMSASSIATSLAKAASKYVLLLTACAQVTVVKFFIVSS 143
P R T S++ AT+ + + L C Q VK I ++
Sbjct: 919 PTRYSTTKSSAVTATNASSMIAPVALTAATCDQNKAVKKHITTT 962
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 290 WRTVVAC*MSQNNV 249
WR+ V C ++ NNV
Sbjct: 56 WRSYVVCDVAYNNV 69
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 348 LSTVAQYNNVNNKQKGVKLDFKSIE 422
LS YNN NN K + + IE
Sbjct: 318 LSNNYNYNNYNNNYKPLHYNINYIE 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,160
Number of Sequences: 438
Number of extensions: 3970
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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