Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10p01r
(757 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 431 e-120
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 419 e-116
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 221 e-110
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 378 e-104
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 329 4e-89
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 238 4e-89
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 293 3e-78
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 287 2e-76
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 287 2e-76
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 272 8e-72
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 267 2e-70
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 182 1e-44
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 145 1e-33
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 130 5e-29
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 129 6e-29
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 125 1e-27
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 122 1e-26
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 118 1e-25
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 118 1e-25
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 113 4e-24
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 112 8e-24
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 111 2e-23
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 110 3e-23
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 109 7e-23
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 105 2e-21
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 103 4e-21
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 103 5e-21
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 103 5e-21
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 98 2e-19
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 95 1e-18
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 93 5e-18
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 93 9e-18
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 85 2e-15
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 83 9e-15
UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 40 0.050
UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_030005... 38 0.35
UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransfera... 38 0.35
UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.82
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 36 1.1
UniRef50_UPI00005A603F Cluster: PREDICTED: hypothetical protein ... 36 1.1
UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular ... 36 1.1
UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2; ... 36 1.4
UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacill... 35 1.9
UniRef50_Q0S5H2 Cluster: Undecaprenyl-phosphate galactose phosph... 35 1.9
UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: V... 34 3.3
UniRef50_A7CME0 Cluster: Putative uncharacterized protein precur... 34 3.3
UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 34 4.4
UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family prote... 34 4.4
UniRef50_Q9VY40 Cluster: CG1517-PB, isoform B; n=12; Coelomata|R... 34 4.4
UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing pr... 33 5.8
UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens "Keratin... 33 5.8
UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4... 33 5.8
UniRef50_A7B900 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa... 33 5.8
UniRef50_Q9P557 Cluster: Related to merozoite surface antigen 2;... 33 5.8
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 7.6
UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1; Psychroba... 33 7.6
UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=... 33 7.6
UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2; ... 33 7.6
UniRef50_Q8T3A0 Cluster: Putative coagulation serine protease; n... 33 7.6
UniRef50_Q8IQK7 Cluster: CG32132-PA; n=2; Drosophila melanogaste... 33 7.6
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 431 bits (1062), Expect = e-120
Identities = 197/243 (81%), Positives = 219/243 (90%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV QR
Sbjct: 9 LKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQR 68
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
L+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+
Sbjct: 69 LVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKK 128
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRN
Sbjct: 129 TQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRN 188
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 31
LGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K YISLP+GKG++L+I
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSI 248
Query: 30 AEE 22
AEE
Sbjct: 249 AEE 251
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 419 bits (1032), Expect = e-116
Identities = 187/243 (76%), Positives = 217/243 (89%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR
Sbjct: 9 LKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQR 68
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV++
Sbjct: 69 FIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRK 128
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
+ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG N
Sbjct: 129 IFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGAN 188
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 31
LGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K +ISLPRGKGIRLTI
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 248
Query: 30 AEE 22
AEE
Sbjct: 249 AEE 251
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 221 bits (541), Expect(2) = e-110
Identities = 93/132 (70%), Positives = 118/132 (89%)
Frame = -2
Query: 417 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 238
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 237 LCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 58
+CM+TGG NLGR+G I +RERHPGSFD+VH+KDSTG++FATRL+N+F+IGKG K ++SLP
Sbjct: 212 MCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLP 271
Query: 57 RGKGIRLTIAEE 22
RGKGIRLTIAEE
Sbjct: 272 RGKGIRLTIAEE 283
Score = 199 bits (485), Expect(2) = e-110
Identities = 92/112 (82%), Positives = 100/112 (89%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR
Sbjct: 9 LKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQR 68
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 415
IK+DGKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 69 FIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 378 bits (931), Expect = e-104
Identities = 172/244 (70%), Positives = 205/244 (84%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT EV+ I+ QR
Sbjct: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQR 68
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
I+VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV+
Sbjct: 69 HIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 128
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
+ G K +PYL T+DGRTIRYPDPLIK ND+I+LD+ KI++FIKF+ GN+ M+TGGRN
Sbjct: 129 IQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRN 188
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 31
GRVG I +RE+H GSF+ +HI+DSTGH FATRL NV+ IGKGTK ++SLP+GKGI+LTI
Sbjct: 189 RGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTI 248
Query: 30 AEEA 19
EEA
Sbjct: 249 IEEA 252
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 329 bits (809), Expect = 4e-89
Identities = 145/246 (58%), Positives = 189/246 (76%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKRLNAP WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G EV IVK R
Sbjct: 9 LKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNR 68
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
IK+DGK+RTD YP GFMDV+SI +T E FRL+Y+ K RF + +T E+AK+KLCK+++
Sbjct: 69 TIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEK 128
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
G +PY+VTHDGRTIRYP P ++ ND+I+L++ T KI+DF+KF+ GN M+ GG
Sbjct: 129 RVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNG 188
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 31
+GRVG IV RE HPGSF+IVHIKD+ G+TF TRLNNVF+IGKGT+ ++LP KGI+ +
Sbjct: 189 MGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPL 248
Query: 30 AEEAGQ 13
++ +
Sbjct: 249 LQQVNE 254
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 238 bits (582), Expect(2) = 4e-89
Identities = 102/148 (68%), Positives = 126/148 (85%)
Frame = -2
Query: 465 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLD 286
D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 285 IATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLN 106
+ T KI DF KF++GNLCM+TGG NLGR+G I +RE HPGSFD+VH+KD+ G++FATRL+
Sbjct: 136 LETGKITDFFKFDTGNLCMVTGGTNLGRIGVITNRENHPGSFDVVHVKDANGNSFATRLS 195
Query: 105 NVFIIGKGTKAYISLPRGKGIRLTIAEE 22
N+F+IGKG +ISLP GKGIR TIAEE
Sbjct: 196 NIFVIGKGNIPWISLPHGKGIRFTIAEE 223
Score = 113 bits (272), Expect(2) = 4e-89
Identities = 52/67 (77%), Positives = 57/67 (85%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LK + APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI Q
Sbjct: 9 LKHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIRMQH 68
Query: 570 LIKVDGK 550
IK+DGK
Sbjct: 69 FIKMDGK 75
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 293 bits (719), Expect = 3e-78
Identities = 135/246 (54%), Positives = 179/246 (72%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKRL AP W+L K G +A PSTGPHKLRECLP+ IFLR+RLKYALT E + IVK+R
Sbjct: 23 LKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRR 82
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
L+KVDGKVRT+ YP G MDV+ + K+NELFR+IYD KGRF +H I +EA +KL +V +
Sbjct: 83 LVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQ 142
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
G K +P++VTHDGRTI Y DP ++V+D+++ +I T ++ IKF+ G++ M+T G N
Sbjct: 143 FKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGN 202
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 31
+GRVGTI E+ SFDIVH+KD++G FATR+ NVF+IG+ ISLP +G+R +I
Sbjct: 203 VGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSI 262
Query: 30 AEEAGQ 13
E Q
Sbjct: 263 LEGINQ 268
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 287 bits (704), Expect = 2e-76
Identities = 138/231 (59%), Positives = 173/231 (74%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKR+ A + WMLDKL GV+A RPSTGPHKLRECLP IFLRNRLKYALTG+EV KI Q
Sbjct: 20 LKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPH-IFLRNRLKYALTGDEVKKICMQW 78
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
IKVDGK+RTD P MDV+SI+K E F LIY + RF +HRITPEE KYKLCK+++
Sbjct: 79 FIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRK 138
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
+ K +P+LV HD T+R+PD LIKVND+IQ+D+ T KI +KF++GNLC++TGG N
Sbjct: 139 IFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKI-TALKFDTGNLCLVTGGGN 197
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 58
GR+G I +RERHP SFD H+KD+ ++F+ +F+I KG K +ISLP
Sbjct: 198 WGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 287 bits (704), Expect = 2e-76
Identities = 130/236 (55%), Positives = 177/236 (75%)
Frame = -2
Query: 747 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 568
KRLNAPK W+L+KLGG++APR S+GPHK + +PLVI +RN+LKY+ E L I+K+
Sbjct: 10 KRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNILKKNE 69
Query: 567 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 388
I VDGKVR D +PAG MDV+SI+ T E +R++YD G F +HRIT +E+ +KLCKV RV
Sbjct: 70 IYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCKVIRV 129
Query: 387 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 208
+ G K +PY+VTHDGRTIR+P+ LIK NDSI LD+ K++DFIKF G+LC++ G N+
Sbjct: 130 SIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGSNI 189
Query: 207 GRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR 40
GR+G ++ GS IV +KD G +F+T+ N+F+IGKGTK++ISLPR +G+R
Sbjct: 190 GRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPRFRGLR 245
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 272 bits (666), Expect = 8e-72
Identities = 125/226 (55%), Positives = 162/226 (71%), Gaps = 2/226 (0%)
Frame = -2
Query: 693 APRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV--KQRLIKVDGKVRTDPTYPAG 520
A RPS GPHKLRE LPL + L+ RL YAL G +V I+ K++ + VDGKVR D YP G
Sbjct: 138 ATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTG 197
Query: 519 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGR 340
MDVV IEKT++ FR++YD KGRF + ++ EEAKYKL KV A GP +PY+VTHD R
Sbjct: 198 LMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSR 257
Query: 339 TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF 160
TIR+P+P IK+ D+++ D+ KI +F ESGN+C I G N+GRVG I E+H GSF
Sbjct: 258 TIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSF 317
Query: 159 DIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEE 22
DI H+KD+ G+ FATRL N+F++G+G K++I LP G G+R TI EE
Sbjct: 318 DICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEE 363
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 267 bits (655), Expect = 2e-70
Identities = 126/244 (51%), Positives = 164/244 (67%), Gaps = 1/244 (0%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKRL APK WML KL GV+APRP GPHKLRECLPL++ +RNRLKYAL E I++Q
Sbjct: 6 LKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQG 65
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
L+ VD R D YPAGFMDVV I KT + FRL+YDVKGRF + ++ EA+ KL KV
Sbjct: 66 LVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVN 125
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
+ T VP VTHDG IRYPDP + D+I ++ K +D IK G ++TGG N
Sbjct: 126 LYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGAN 185
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG-TKAYISLPRGKGIRLT 34
GR+G IV E HPG+F+I H+KD++G FATR N+F+IGK +++P+ +G+R+
Sbjct: 186 RGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMN 245
Query: 33 IAEE 22
+ +E
Sbjct: 246 VIQE 249
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 182 bits (442), Expect = 1e-44
Identities = 93/244 (38%), Positives = 153/244 (62%), Gaps = 1/244 (0%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKR APK+WMLDK GG +A P++GPHK EC+PL + L+YA E+ I+ ++
Sbjct: 9 LKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILAEK 68
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
IKV+G+VRT+ +P G DVVSIEKT E FR++Y+V +F +HRI+ EEA Y+L KV +
Sbjct: 69 NIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKVTK 128
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
+ +PY+V+ G +IR+ DP I + +I++ T+K++++I + ++ G+
Sbjct: 129 KYEN-QGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRGKA 187
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK-AYISLPRGKGIRLT 34
GRVG +++ G + + D G+TF+ + +IG+ ++ +I+LP+ +GIR +
Sbjct: 188 RGRVG-VINTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIRQS 246
Query: 33 IAEE 22
E+
Sbjct: 247 ELEK 250
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 145 bits (351), Expect = 1e-33
Identities = 89/243 (36%), Positives = 133/243 (54%), Gaps = 10/243 (4%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LK L AP+ W + + +A +P GPH + LPL++ +RN L YA T E K++ +
Sbjct: 10 LKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEG 69
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFTIHRITPEEAKYKLCKVK 394
+VDG VR D +P GFMDV+ + T E FR++ Y VK F +H I EE K +++
Sbjct: 70 HFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFKLHPIPEEEGDLKPVRIE 128
Query: 393 RVATGPKNVPYLVTHDGRTI--RYPDP------LIKVNDSIQLDIATTKIMDFIKFESGN 238
T L HDGR I R DP + + D++ + + +I IKF G
Sbjct: 129 NKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGA 188
Query: 237 LCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 61
+ +I GGRN+GRVG + S ++ G +V ++D++G+ F T L+ VF+IG + ISL
Sbjct: 189 IAIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISL 247
Query: 60 PRG 52
P G
Sbjct: 248 PEG 250
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 130 bits (313), Expect = 5e-29
Identities = 80/238 (33%), Positives = 123/238 (51%), Gaps = 16/238 (6%)
Frame = -2
Query: 750 LKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 574
+KRL AP AW + K GG +APRP GPH + +PL+I +R+ L YA E KI+ +
Sbjct: 12 VKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKIITR 71
Query: 573 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 394
I VDG VR +P +P G MDVV I +T + +R++ + R + I+ EEA+ K+C++K
Sbjct: 72 GEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIK 131
Query: 393 RVATGPKNVPYLVTHDGRT--IRYPDP------LIKVNDSIQLDI------ATTKIMDFI 256
+ HDG+ + DP + V DS+ L++ + K++D I
Sbjct: 132 NKTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHI 191
Query: 255 KFESGNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGK 85
FE G GR+ G VG +V + G D++ +++ G F T + IGK
Sbjct: 192 PFEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIAIGK 249
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 129 bits (312), Expect = 6e-29
Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 10/232 (4%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKRL AP W L + + RPS GPH + + LPL++ +R+ LKYA E KI++
Sbjct: 10 LKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTG 69
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV-- 397
I +DG R + +PAG MDV+SI + +E + +++D GR ++ + ++ KLCK+
Sbjct: 70 KILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKK--TDKTDVKLCKIVN 127
Query: 396 KRVATGPKNVPYLVTHDGR--------TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESG 241
K V G N+ L HDGR + + + K DS+ + I I + F G
Sbjct: 128 KTVVKG-GNI-QLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEG 185
Query: 240 NLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 85
L ITGG+++G IV E DIV +++ G F T VFI+G+
Sbjct: 186 KLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 125 bits (301), Expect = 1e-27
Identities = 74/234 (31%), Positives = 120/234 (51%), Gaps = 4/234 (1%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LK APK W + + +PS G H + L L + +R+ LK A E +I+
Sbjct: 10 LKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRIINSG 69
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
+ VDG+V D +P GFMD++ I KT E++R++ D KGR +++I EE KLCK+
Sbjct: 70 NVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVN 127
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
+T + HDG+ + + V D I L + +I + + + G +ITGG++
Sbjct: 128 KSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLITGGKH 187
Query: 210 LGRVGT----IVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 61
G +GT IV+ +P + + I++S F T + F++G+ A ISL
Sbjct: 188 TGELGTVSEIIVNESSNPNT---IIIENSAKDEFLTLKDYAFVVGEDAPA-ISL 237
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 122 bits (294), Expect = 1e-26
Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 9/231 (3%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
L+R AP W + + V+ +PS GPH L +P+ I LR+ YA T E +I+ R
Sbjct: 12 LRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILASR 71
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
+I+VDG+V TD +P G MDV+ I + +R++ D + I PEEA YKL +++R
Sbjct: 72 VIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQIRR 131
Query: 390 VATGPKNVPYLVTHDGRTI-------RYPDPL-IKVNDSIQLDIATTKIMDFIKFESGNL 235
T HDGR + Y + K D++ + I I+ + FE G L
Sbjct: 132 KMTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPRQSIVSHVPFEVGTL 191
Query: 234 CMITGGRNLGRVGTI-VSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 85
++ GRN+G +G I ++ S +V ++D++G T L V +GK
Sbjct: 192 AIVVDGRNVGFMGRINAIQQVFKRSRALVELEDASGAKSRTILQYVLPVGK 242
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 118 bits (285), Expect = 1e-25
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 3/225 (1%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
L+R +P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ +
Sbjct: 4 LRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGKG 63
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
+KVDGKVR D YP G MDV+ + NE +R+I D RI EA K+C+++
Sbjct: 64 YVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIED 123
Query: 390 VATGPKNVPYLVTHDGRTI---RYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 220
L HDGR I + + S+ +++ K+MD+ + +
Sbjct: 124 KTMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAFN 183
Query: 219 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 85
G N+GR GT+++ R D + + F T LN + +IGK
Sbjct: 184 GVNVGRHGTLINWVRSFRKRDAIATVKAKDSEFRTVLNYLLVIGK 228
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 118 bits (285), Expect = 1e-25
Identities = 73/231 (31%), Positives = 116/231 (50%), Gaps = 1/231 (0%)
Frame = -2
Query: 747 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 568
KRL + + + + P P+ G H + + L+ +R+ LK + E +I+ L
Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGL 65
Query: 567 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 388
+KVDGK + + GFMDV+ I E +R++Y+ +G + + T E A KL KV+
Sbjct: 66 VKVDGKTVREKKFAVGFMDVIEIN--GESYRVVYNDQGALVLMKETKERASMKLLKVRSK 123
Query: 387 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 208
P N L THDGRT D KV D + + KI + IK + GN IT G ++
Sbjct: 124 VIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHV 183
Query: 207 GRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 58
+ GTI E G S ++VH ++ F+T ++VF+IG +++ P
Sbjct: 184 NQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSP 230
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 113 bits (272), Expect = 4e-24
Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Frame = -2
Query: 750 LKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 574
L+R AP W + K GGV+ RPS GPH L LPL + +R+ LKYA T +E I+ +
Sbjct: 4 LRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISR 63
Query: 573 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 394
+KVDG VR D +P G MDV+ I T E++R++ D + + I+ EEA KL +V+
Sbjct: 64 GYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVE 123
Query: 393 RVATGPKNVPYLVTHDGR---TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMIT 223
L HDGR T IK DS+ D+ I I + G ++
Sbjct: 124 GKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVI 183
Query: 222 GGRNLGRVGTI 190
G N+G GT+
Sbjct: 184 HGSNVGFSGTL 194
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 112 bits (270), Expect = 8e-24
Identities = 75/233 (32%), Positives = 112/233 (48%), Gaps = 7/233 (3%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKRL AP +W + K + + + GPH LP+ ++LR + A +EV KI+ QR
Sbjct: 5 LKRLVAPGSWHIPKKVQKFVMKTAPGPHNAG-ALPVGVWLREHIGLAQNASEVKKILHQR 63
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
+ V+G+ D G D+VSI K + +R+ DVKG I E AK +LCK++
Sbjct: 64 DVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKIRN 123
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATT-----KIMDFIKFESGNLCMI 226
T L G + D K DS+ + + T +I+D + GN+ MI
Sbjct: 124 KTTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVAMI 182
Query: 225 TGGRNLGRVGTIVSRERHPGSF--DIVHIKDSTGHTFATRLNNVFIIGKGTKA 73
GG++ G+VG IV R S ++ DS G F T VF++G+ A
Sbjct: 183 VGGKHSGKVGRIVEIIRTASSVPNHVILTDDSAGERFETIEEYVFMVGRSAIA 235
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 111 bits (267), Expect = 2e-23
Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Frame = -2
Query: 747 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 568
KRL+ PK+W + + G + GPH LPL + +R+ LK E +I+ +
Sbjct: 5 KRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSEGK 64
Query: 567 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 388
+ VDG R D +P G DV+++ NE +R++ D KGR ++++ E KLC++
Sbjct: 65 VLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRINNK 123
Query: 387 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 208
T L +DG I + DS+ L I ++ +KFE GNL M+ GG++
Sbjct: 124 TTVKGGKIQLNLNDGTNILGSND-YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHS 182
Query: 207 GRVGTIVS-RERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 85
G G I+ RE + V I T F T + V +IG+
Sbjct: 183 GETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE 222
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 110 bits (265), Expect = 3e-23
Identities = 58/229 (25%), Positives = 112/229 (48%)
Frame = -2
Query: 747 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 568
KR+++ K G++ + S+GPH + + L+ ++ A E K+VK
Sbjct: 10 KRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGF 69
Query: 567 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 388
+ V+GK +P MD +S N+ +R++ G+ T++ I E K+CKV ++
Sbjct: 70 LYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKI 129
Query: 387 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 208
++T D R ++ IKV DS+ + +I+ +KFE G+LC+IT G++L
Sbjct: 130 INASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHL 189
Query: 207 GRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 61
G + I + ++H++ G + +++ +IG+ + +SL
Sbjct: 190 GTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 109 bits (262), Expect = 7e-23
Identities = 68/226 (30%), Positives = 108/226 (47%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKR+ AP+ W + + + +P G H +PLV+ LR+ LK A +E+ KI+ +
Sbjct: 6 LKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHEG 65
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
+ VDGKVR D Y G D +SI N +R++ + G+F H + +A K+CK+
Sbjct: 66 KVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF--HLVPVTDASAKICKIVN 123
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
L HDG T+ + K DS+ L + KI + G+L M+T G++
Sbjct: 124 KTALRGGKIQLNLHDGTTMIASND-YKTKDSVILKMPERKIDQHFTYAVGSLVMVTEGKH 182
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKA 73
G +G + + S + + F T VF+IGK + A
Sbjct: 183 SGEIGKVKEIKVVRSSAPNTVVITTPEGDFETIEQYVFVIGKDSPA 228
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 105 bits (251), Expect = 2e-21
Identities = 75/230 (32%), Positives = 108/230 (46%), Gaps = 8/230 (3%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
+ R AP + K + R GPHK++E +PL I L+ LK T E +I+
Sbjct: 4 ITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFDG 63
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
+ VDGKVR D YP G MDVV I + R+I D T I+ E+AKYK ++
Sbjct: 64 KVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMN 123
Query: 390 VATGPKNVPYLVTHDGRTIRYP-DPLIKVN----DSIQLDIATTKIMDFIKFESGNLCMI 226
T V L DGR I + L + N ++++++ KI + G MI
Sbjct: 124 KTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTLTTLKIELPEQKITTAYTIKEGVYAMI 183
Query: 225 TGGRNLGRVGTI--VSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGK 85
GGRN G G I + ++ + +V ++ G TF T L NV IG+
Sbjct: 184 IGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLINVMAIGE 233
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 103 bits (248), Expect = 4e-21
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Frame = -2
Query: 747 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 568
K + A + + + ++ P+ H + +P++I LR+ LK E+ +I+ +
Sbjct: 7 KIMMASRKLKIPRKTNFWSVTPTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNM 66
Query: 567 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKR 391
+KVDG++ D +P GFMDV+SI+ + ++YD KG+ I + P KL K VK+
Sbjct: 67 VKVDGRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKK 126
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
G + L HDG+TI I +D + + I +I + +K G+ ITGG +
Sbjct: 127 TIIGTGKI-QLGFHDGKTIVTDRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSH 185
Query: 210 LGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVFIIG 88
+G + TI S E S ++V++ + F+T + +F++G
Sbjct: 186 VGELATIKSIEVKKSSVKNMVYLNEG----FSTIKDYMFVVG 223
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 103 bits (247), Expect = 5e-21
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
+KRL P++W L + ++ +P+ G H C+PL + LR+ L A E +++ R
Sbjct: 6 MKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLATR 65
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
+ VDG++ TD G MDV+++ + + FR I DV G+ I+ + A KLC+V
Sbjct: 66 QVLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCRVMG 123
Query: 390 VATGPKNVPYLVTHDGRTIRYPD-PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGR 214
+T + HDGR I D L D++ + + + F G +TGG
Sbjct: 124 KSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLTGGS 183
Query: 213 NLGRVGTIVSRE-RHPGSFDIVHIKDSTGHTFATRLNNVFIIG 88
++G +VSR+ + + V D F T + VFIIG
Sbjct: 184 HIGITAKVVSRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 103 bits (247), Expect = 5e-21
Identities = 56/186 (30%), Positives = 94/186 (50%)
Frame = -2
Query: 747 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 568
KR++ PK+W + K + GPH + +PL + LR+ L E +++ +
Sbjct: 6 KRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSEGN 65
Query: 567 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 388
+ VDG R D +P G MD+++I N +R++ D K R ++++ A KLC+++
Sbjct: 66 VLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRIEGK 124
Query: 387 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 208
+ + + +DG I DSI L + K++ IK+E GNL MI GG +
Sbjct: 125 TSIKEGKIQMRLNDGVNI-IGSNNYNTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGSHA 183
Query: 207 GRVGTI 190
G VG+I
Sbjct: 184 GEVGSI 189
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 98.3 bits (234), Expect = 2e-19
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = -2
Query: 750 LKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 574
L+ L P+ W + K G + +PS GPH +P+ ++LR+ L A EV ++
Sbjct: 9 LRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNN 68
Query: 573 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-V 397
+ VDG+ D +P G DV++I + NE +R++ D +G+ + +I EEA K K +
Sbjct: 69 GKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKII 128
Query: 396 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 217
++V+ + Y +T DGRT D K + + +I KI + I E I G
Sbjct: 129 RKVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYIIRG 186
Query: 216 RNLGRVGTI 190
++ GR+G I
Sbjct: 187 KHTGRIGVI 195
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 95.5 bits (227), Expect = 1e-18
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Frame = -2
Query: 747 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 568
K + AP+ + + +A G HK +PL+I LR+ LK E+ +I+ L
Sbjct: 6 KIMMAPRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSL 65
Query: 567 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 388
+ VDGKV + GFMD +++ + L + YD KG+ I E KL +VK
Sbjct: 66 VMVDGKVVKERRRGIGFMDTLTVSGNDYL--VSYDRKGKLVILPKPGETKGLKLLRVKGK 123
Query: 387 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 208
+ HDG T+ IK DS+ + I +I+D +KF GN ITGG ++
Sbjct: 124 TYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHV 183
Query: 207 GRVGTIVSRE-RHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 58
G + TI S E + ++VH+ + F+T + VF++G K S+P
Sbjct: 184 GEIATIKSIEIKSSSGENMVHMNEG----FSTVSSYVFVMG-SPKYTFSMP 229
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 93.5 bits (222), Expect = 5e-18
Identities = 60/170 (35%), Positives = 90/170 (52%)
Frame = +1
Query: 4 AMRLSRFLGDGEADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLA 183
A L F+ DGE D LA +RD RL A D EHV + R + ++ GVL VHN EG + LA
Sbjct: 24 ARLLLLFVDDGELDTLALGKRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLA 83
Query: 184 GHDGAHAPQVTASRDHTQVPGLKLDEVHNLRSCNV*LDGIVDFDKWVWIADGAAIMRYQV 363
D A V + DH Q ++LD + +L +V +G+ D + + +GAA+++
Sbjct: 84 ALDHPDATGVVTTGDHAQSADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDA 143
Query: 364 RNILRSGRHTLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLN*DNI 513
R+ L QLVL D V ES+L ++D + FI+L + D++
Sbjct: 144 RHALVPELLAPHLAQLVLRFDSLDAVHNESSLGVVDEPEVFIALFDGDDV 193
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 92.7 bits (220), Expect = 9e-18
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Frame = -2
Query: 747 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 568
KR+ AP AW + + Y S+GPH LP+ I+LR+ +++AL EV KI+ R
Sbjct: 5 KRMTAPDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQ 63
Query: 567 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 388
+ ++G + TD D++S K ++ + ++ D KGR + I+ + AK +L KV
Sbjct: 64 VLLNGHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANK 123
Query: 387 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA---TTKIMDFIKFESGNLCMITGG 217
T + G + K DS+ + IA + + GN+ +I GG
Sbjct: 124 TTIKGGKTQINLTSGANF-IGEENCKGKDSLVIGIAGDDRFAVQQHFPYAVGNMAIIIGG 182
Query: 216 RNLGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVFIIG 88
++ + G +V S + V I+D+ G+ F T + V++IG
Sbjct: 183 QHTMKTGKLVEILVQESSLPNRVIIEDADGNKFETIEDYVYMIG 226
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 85.0 bits (201), Expect = 2e-15
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 2/221 (0%)
Frame = -2
Query: 747 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 568
KRL+ P +W +++ + + GPH +PL+I LR+ L YA E + +
Sbjct: 6 KRLSVPNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNEDN 64
Query: 567 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 388
+ ++GK +D P G D+++ + E +R+ GR + I P+ A+ KL K+
Sbjct: 65 VLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLALTAIDPDAAQSKLGKIVTK 124
Query: 387 ATGPKNVPYLVTHDGRT-IRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
L HDG T I D DSI + +++ ++E G L G +
Sbjct: 125 THVSGGDVQLGLHDGETLIVEDDQTYDAGDSIVVGNEDGEVVAHFEYEEGALVTAVDGAH 184
Query: 210 LGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVFII 91
G VG + + PGS + V + G F T V +I
Sbjct: 185 AGEVGEVEEIQVTPGSAQNNVIVSQDEGEGFETVEEYVVVI 225
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 82.6 bits (195), Expect = 9e-15
Identities = 52/187 (27%), Positives = 82/187 (43%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKR AP W + + G + G H +P + LR+ L T E K +
Sbjct: 10 LKRQMAPSFWGITRKGKRFVVTVHPGAHSKHRSIPSAVLLRDTLGAVSTLREAKKSIYSG 69
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
++VDG RT + G MDVV + T +++R++ +I E K+C+V
Sbjct: 70 NVEVDGVKRTSLHHGIGLMDVVELGGTGDIYRMVPSGGAILKPVKIEAAEKDRKICRVTS 129
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
+ + HDGR++ D + V DS + + KI+ + E G ++T G N
Sbjct: 130 KTSISGGRTQIGFHDGRSL-ISDEKVSVGDSCLVQVPGQKILKVARMEKGAHAVVTRGTN 188
Query: 210 LGRVGTI 190
G GTI
Sbjct: 189 AGSTGTI 195
>UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 186
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = +1
Query: 31 DGEADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAHAPQ 210
D + D L R+R RL LA+ EH+ Q + + G+L+V ++G + L D ++
Sbjct: 99 DRQLDXLTLRKRYPRLCPLANDEHIAQTSCKFMPSGILNVDGLKGPLVLLPVLDDSNTAP 158
Query: 211 VTASRDHTQVPGLKLDEV 264
V ++ H +P +K DEV
Sbjct: 159 VPSTSHHDNIPNIKFDEV 176
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 40.3 bits (90), Expect = 0.050
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = -2
Query: 681 STGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 502
+T P +L + + L + ++ K L E L I KQ+ +KV+ K + DPT+P D S
Sbjct: 100 NTQPRELLKVVNLDPKIMDKEKKKL--EEELDINKQQKVKVEHKKQLDPTFPRNDFDKFS 157
Query: 501 IEKTNELFRLIYDVKG 454
IE +++ L+ + KG
Sbjct: 158 IEDMDQVLNLLSNYKG 173
>UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 546
Score = 39.1 bits (87), Expect = 0.12
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -1
Query: 115 EVEQRVHNRQ---GHEGVHLAAARQGHPPHHRRGSGTSASQ 2
E Q+VH R+ G E +HL + HPPHHR+G+ S +
Sbjct: 441 EYVQKVHEREMKSGEEAIHLPNSGTHHPPHHRKGANGSGKK 481
>UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_03000514;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000514 - Ferroplasma acidarmanus fer1
Length = 317
Score = 37.5 bits (83), Expect = 0.35
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +1
Query: 481 QFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQDFVSGQSILQTIPQENHQGQALA 660
Q I+ N +NI + I + N P E LFH F DFVSG ++ I + + + +A
Sbjct: 50 QVINTYNDENILEIINIPDIKYNIPDAEKEILFHKFIDFVSGNKLISGIMKIMYLDRKIA 109
Query: 661 QLV 669
Q +
Sbjct: 110 QFI 112
>UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransferase;
n=4; Rhodospirillaceae|Rep: Predicted SAM-dependent
methyltransferase - Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264)
Length = 820
Score = 37.5 bits (83), Expect = 0.35
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -1
Query: 148 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 23
H+G TH R + RQGH+ V AA R GHP HHR G
Sbjct: 24 HRGDQETHDRIGPQLVPGTRQGHQAVDHAAPR-GHPQHHREG 64
>UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 228
Score = 36.3 bits (80), Expect = 0.82
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = -1
Query: 307 QRFHPVRHCNYEDYGLHQV*VRELVYDHGRP*LGARGHHRV-PRETSRLLRHCAHQGLHG 131
Q HP+ H ++ H +R+L++ P HH + P + + L H HQ LH
Sbjct: 64 QHHHPI-HQHHHHTHQHPHHIRQLLHHIHLP-----HHHTLQPPQVTVQLHHHIHQHLHH 117
Query: 130 TH-LRHEVEQRVH-NRQGHEGVHLAAARQGHPPHHRR 26
TH L H + Q + Q H +H PHH R
Sbjct: 118 THQLHHHIHQLLQVIVQHHHPIHQHHHHTHQHPHHIR 154
>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
gallus
Length = 1119
Score = 35.9 bits (79), Expect = 1.1
Identities = 27/68 (39%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = +3
Query: 39 GGCP--CRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQ----CRR-SRDVSRGTRWC 197
GGC C C CR R RRC PWSP CAQ C + RDV +G C
Sbjct: 128 GGCEHDCVQLTANQHQCRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDV-QGAARC 185
Query: 198 PRAPSYGL 221
P Y L
Sbjct: 186 ECRPGYRL 193
>UniRef50_UPI00005A603F Cluster: PREDICTED: hypothetical protein
XP_549800; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_549800 - Canis familiaris
Length = 253
Score = 35.9 bits (79), Expect = 1.1
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 323 THLSKSTIPSS*TLQLRRLWTS-SSLSPGTCV*SREAVTWGAWAPSCPARDIPAPSTLCT 147
THLS +T + T LR W S ++ +PG SR T GA SC R A T CT
Sbjct: 126 THLSITTSIGA-TCALRATWASDTTCTPGATCASRATCTPGA---SCSLRATCASVTTCT 181
Query: 146 SRTPRDTPSP 117
R R T +P
Sbjct: 182 PRVMRATLTP 191
>UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 110
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = -1
Query: 316 YQSQRFHPVRHCNYEDYGLHQV*VRELVY--DHGRP*LGARGHHRVPRETSRLLRHCAHQ 143
+ + + HP+R Y G+ V++LV DH R A HR R RL + H+
Sbjct: 31 FHAFKIHPLRIA-YRT-GIDVTLVQQLVSGEDHQRLFKAALARHRKSRRDQRLHKSLRHK 88
Query: 142 GLHGTHLRHEVEQRVHNRQGHE 77
G+ L+H++EQ +G +
Sbjct: 89 GIAQAELQHKIEQDYQETKGQK 110
>UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular
organisms|Rep: Tryptophan-rich antigen - Plasmodium
vivax
Length = 2662
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -1
Query: 202 RGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHE-GVHLAAARQG--HPPH- 35
RG H P + + H H G H +H ++ VH Q H+ GVH A Q HP H
Sbjct: 376 RGVH--PEQAHQKGVHPKHAHQKGVHPKHAHQKGVHPEQAHQRGVHPEQAHQKGVHPKHA 433
Query: 34 HRRG 23
H+RG
Sbjct: 434 HQRG 437
>UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 471
Score = 35.5 bits (78), Expect = 1.4
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = -1
Query: 157 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGSGTSASQ 2
HC G HG H R H G G R GH PPHH G S S+
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSR 412
>UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacillus
anthracis
Length = 265
Score = 35.1 bits (77), Expect = 1.9
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = -1
Query: 208 GARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 29
G GHH H HQG HG H H + GH+G H GH HH+
Sbjct: 112 GHHGHHHHQGHHGHHGHH-HHQGHHGHHGHHHHQ----GHHGHQGHHHHQGHHGHHGHHQ 166
Query: 28 R 26
+
Sbjct: 167 Q 167
Score = 33.5 bits (73), Expect = 5.8
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -1
Query: 208 GARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 29
G +GHH H HG H H QGH+G H GH HH
Sbjct: 148 GHQGHHHHQGHHGHHGHHQQQVHHHGHHHIHPQAILYQTHQGHQGHHDHHGHHGHQGHHG 207
Query: 28 RGS 20
+ S
Sbjct: 208 QHS 210
>UniRef50_Q0S5H2 Cluster: Undecaprenyl-phosphate galactose
phosphotransferase; n=4; Bacteria|Rep:
Undecaprenyl-phosphate galactose phosphotransferase -
Rhodococcus sp. (strain RHA1)
Length = 488
Score = 35.1 bits (77), Expect = 1.9
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 97 EHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAHAPQVTASRDHTQVPGLKLDEVHNLR 276
E V+ E +RG D + V G+ + GH G H ++T + V G +LD + +L
Sbjct: 164 EGAVRILAESFARGTADGYRV--VGVCIPGHSGEHGDKITVAGRDIPVLGSELDVIDSLG 221
Query: 277 SCN 285
C+
Sbjct: 222 FCH 224
>UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 906
Score = 34.7 bits (76), Expect = 2.5
Identities = 32/103 (31%), Positives = 44/103 (42%)
Frame = +2
Query: 215 RPPVIIHKFPDSNLMKSIIFVVAMSNWMESLTLISGSG*RMVRPSCVTKYGTFLGPVATR 394
RPP H SN + S + A S +S+TLI +R T TF+ VA
Sbjct: 298 RPPRTAHIAQSSNPLLSRLDSTASST-SQSITLIGSDYDAYLRYQAATS--TFVASVAQT 354
Query: 395 LTLHNLYLASSGVIRWIVNLPLTS*IRRNSSLVFSIETTSINP 523
+ + SS + WI++ + I N L SI TTS P
Sbjct: 355 DNVSVCFTQSSSLGPWILDSGASDHISGNKHLFSSITTTSALP 397
>UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: VrrB
- Bacillus anthracis
Length = 115
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/42 (45%), Positives = 20/42 (47%)
Frame = -1
Query: 157 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 32
H HQG HG H H H+ QGH G H QGH HH
Sbjct: 17 HQGHQGHHG-HQGH------HHHQGHHGHHGHHHHQGHHGHH 51
Score = 33.9 bits (74), Expect = 4.4
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = -1
Query: 208 GARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH----LAAARQGHP 41
G GHH H HQG HG H H +Q+VH+ GH +H L QGH
Sbjct: 34 GHHGHH----------GHHHHQGHHGHHGHH--QQQVHH-HGHHHIHPQAILYQTHQGHQ 80
Query: 40 PHH 32
HH
Sbjct: 81 GHH 83
>UniRef50_A7CME0 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia pickettii 12D|Rep: Putative
uncharacterized protein precursor - Ralstonia pickettii
12D
Length = 533
Score = 34.3 bits (75), Expect = 3.3
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -1
Query: 223 GRP*LGARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQ-RVHNRQGHEG-VHLAAARQ 50
G+P + A HRV +E + R H+ + H+ EQ RVH R G EG + A Q
Sbjct: 317 GKPAVQALEAHRVDQERADRRRDAPHRNVQRFHVDARAEQERVHQRDGAEGHEDVFAEEQ 376
Query: 49 GH 44
H
Sbjct: 377 AH 378
>UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630024D08
product:hypothetical Histidine-rich region containing
protein, full insert sequence; n=1; Mus musculus|Rep: 3
days neonate thymus cDNA, RIKEN full-length enriched
library, clone:A630024D08 product:hypothetical
Histidine-rich region containing protein, full insert
sequence - Mus musculus (Mouse)
Length = 139
Score = 33.9 bits (74), Expect = 4.4
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 196 HHRVPRETSR-LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 32
HH R LLR + G H RH +R H RQ EGV R+GHP HH
Sbjct: 57 HHLSADPAERVLLRGVSPPGEALGHQRHY--ERQHVRQHVEGVGQHGERRGHPAHH 110
>UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Hydrolase,
alpha/beta fold family protein - Plesiocystis pacifica
SIR-1
Length = 310
Score = 33.9 bits (74), Expect = 4.4
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -2
Query: 723 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 544
W +D LGG+ K+R LP+ +F ++ G V +V + ++ G R
Sbjct: 216 WWVDFLGGLIELGDDAKLRKIRADLPIYVFAGDQDPVGAQGKNVRALVDR--LRATGHAR 273
Query: 543 TDPT-YPAGFMDVVSIEKTNELFRLIYDVKG 454
T YP G ++++ + +++ R + D G
Sbjct: 274 VKQTLYPGGRHEMINERERDQVTRELIDWLG 304
>UniRef50_Q9VY40 Cluster: CG1517-PB, isoform B; n=12; Coelomata|Rep:
CG1517-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 2196
Score = 33.9 bits (74), Expect = 4.4
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 199 GHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHP---PHHR 29
G+ P++ + +H HQ HG H H +Q H+ H GHP PH R
Sbjct: 104 GNSLTPQQQQQQ-QHPHHQSHHGHHYAHH-QQHTHHHAPPHSHHPHPHPHGHPHSYPHLR 161
Query: 28 RGSGTSASQ 2
SASQ
Sbjct: 162 HSQPASASQ 170
>UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing protein
35; n=1; Xenopus tropicalis|Rep: Coiled-coil
domain-containing protein 35 - Xenopus tropicalis
Length = 957
Score = 33.5 bits (73), Expect = 5.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 166 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 26
LLRHC + T L++ Q V +++ HE + Q + PHH R
Sbjct: 893 LLRHCGPEASSETELQNTGPQVVASQKTHEKLDNLPTDQANTPHHHR 939
>UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens
"Keratin-associated protein 10-4; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens
"Keratin-associated protein 10-4 - Takifugu rubripes
Length = 353
Score = 33.5 bits (73), Expect = 5.8
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Frame = +3
Query: 45 CPCRAAARCTPSCPCRL*TRCSTS-WRRCVPWSP*CAQCRRSRDVSRGTRWCP---RAPS 212
C C + RC SC C C TS W W P C S WCP R P+
Sbjct: 29 CRCPTSCRCPTSCWCPTYCWCPTSCWCPTYCWCPTSCWCPTSCRCPTSC-WCPTYCRCPT 87
Query: 213 Y 215
Y
Sbjct: 88 Y 88
>UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4;
cellular organisms|Rep: Parallel beta-helix repeat
protein - Oceanicola granulosus HTCC2516
Length = 3143
Score = 33.5 bits (73), Expect = 5.8
Identities = 23/60 (38%), Positives = 26/60 (43%)
Frame = -1
Query: 202 RGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 23
RGH R R R LR A G RH +R +R+ H G L A G P RRG
Sbjct: 2986 RGHRR-RRGGDRELRRLARLLAEGRRHRHRA-RRHRDREDHRGAGLGARSGGRPDGARRG 3043
>UniRef50_A7B900 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 546
Score = 33.5 bits (73), Expect = 5.8
Identities = 26/73 (35%), Positives = 34/73 (46%)
Frame = +1
Query: 22 FLGDGEADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAH 201
F+G A+ALAAR + L LA EHV+ P V L + G G+ + H G
Sbjct: 144 FIGIEAAEALAARGFETHLLELA--EHVLPPL--EVEMATLVTQELRGLGVHV--HVGVA 197
Query: 202 APQVTASRDHTQV 240
A +T DH V
Sbjct: 198 AQSITRGDDHDSV 210
>UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0101400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 361
Score = 33.5 bits (73), Expect = 5.8
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 157 HCAHQGLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRR 26
H HQ LH +H + Q VH+R H R+ HP HHRR
Sbjct: 128 HLRHQHLHPSHQQQPPPPQPVHHRHRHH----VRRRRAHPRHHRR 168
>UniRef50_Q9P557 Cluster: Related to merozoite surface antigen 2;
n=1; Neurospora crassa|Rep: Related to merozoite surface
antigen 2 - Neurospora crassa
Length = 388
Score = 33.5 bits (73), Expect = 5.8
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 260 SSSLSPGTCV*SREAVTWGAWAPSCPARDIPAPSTLCTSRTPRDTPSP 117
S+S + T VT G P A P+P+T T+ P DTP P
Sbjct: 276 STSAAAATAAAPTNEVTDGLRKPDASAEQQPSPTTATTTTPPTDTPKP 323
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.1 bits (72), Expect = 7.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -2
Query: 360 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 226
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 189
Score = 33.1 bits (72), Expect = 7.6
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 5/65 (7%)
Frame = +3
Query: 24 PRRW*GGCPCRAAARCTPSCPCRL*TRCSTSW-----RRCVPWSP*CAQCRRSRDVSRGT 188
P R CP R ARC CP R RC RC P RR R +
Sbjct: 12 PARCPARCPARCPARCPARCPARCPARCPARCPARCPARCPAHCPNNGAARRWRPAAAAR 71
Query: 189 RWCPR 203
R PR
Sbjct: 72 RARPR 76
>UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1;
Psychrobacter sp. PRwf-1|Rep: TonB-dependent receptor -
Psychrobacter sp. PRwf-1
Length = 836
Score = 33.1 bits (72), Expect = 7.6
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = -1
Query: 193 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPH 35
HR+ R T L H H H H+ E+ H GHE GH H
Sbjct: 314 HRINRLTCGLDEHEHGAHEHHDHEEHDHEEHEHEEHGHEAHEHGHEEHGHQEH 366
>UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=6;
Bacteria|Rep: Cobyrinic acid a,c-diamide synthase -
Geobacter bemidjiensis Bem
Length = 311
Score = 33.1 bits (72), Expect = 7.6
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -1
Query: 166 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGSGTSA 8
+ H H+ HGT HE E R H+ HE +H GHP H G +A
Sbjct: 1 MCEHHNHEHSHGTD--HEHEHRHHDHHHHENLH-----HGHPHHATPQGGDAA 46
>UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 597
Score = 33.1 bits (72), Expect = 7.6
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -1
Query: 205 ARGHH---RVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPH 35
ARG H VPR+ SR L A + G + H+V+ R G EG A A G P
Sbjct: 518 ARGRHPEAHVPRQASRHLHEAA--AVPGDQVLHQVDAFAE-RHGGEGA--ADADDGRPDQ 572
Query: 34 HRRG 23
HR G
Sbjct: 573 HRMG 576
>UniRef50_Q8T3A0 Cluster: Putative coagulation serine protease; n=1;
Ciona intestinalis|Rep: Putative coagulation serine
protease - Ciona intestinalis (Transparent sea squirt)
Length = 1089
Score = 33.1 bits (72), Expect = 7.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 266 WTSSSLSPGTCV*SREAVTWGAWAPSCPARDIPAPSTLCTSRTPRD 129
+TS +++PG CV TWG+W P + C + +P D
Sbjct: 408 YTSIAINPGQCV-KPSWTTWGSWTPCASCSGSSSRIRFCANGSPGD 452
>UniRef50_Q8IQK7 Cluster: CG32132-PA; n=2; Drosophila
melanogaster|Rep: CG32132-PA - Drosophila melanogaster
(Fruit fly)
Length = 231
Score = 33.1 bits (72), Expect = 7.6
Identities = 31/113 (27%), Positives = 41/113 (36%)
Frame = -1
Query: 340 HHPLSRPTYQSQRFHPVRHCNYEDYGLHQV*VRELVYDHGRP*LGARGHHRVPRETSRLL 161
HH + PT + Q+ P R + Q+ RE H R + H R RE
Sbjct: 111 HHQHATPTREHQQQTPTRQQQLQREQQQQL-QREQQQQHHRD---RQQHFREQREQRE-- 164
Query: 160 RHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGSGTSASQ 2
R H+ H H H H+R+ HE Q HP H +S Q
Sbjct: 165 REYQHEHEHEQHHHHH-----HHREHHEQHQHQHGHQHHPQHQHHHQYSSQQQ 212
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 857,360,543
Number of Sequences: 1657284
Number of extensions: 19633901
Number of successful extensions: 68136
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 63184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67887
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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