Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10p01r
(757 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 366 e-101
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 365 e-101
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 363 e-101
04_04_0040 + 22322839-22324173 32 0.57
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 0.99
05_03_0323 - 12424243-12424776 31 1.3
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 2.3
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 30 2.3
12_02_0735 - 22636835-22639502,22639755-22640734 29 3.0
11_06_0087 - 19919224-19922304 29 3.0
04_03_1015 - 21734381-21736534 29 3.0
06_01_0083 - 659510-661267,661577-662384,662700-663646 29 4.0
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 5.3
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.3
08_02_1196 - 25190040-25190065,25190224-25190302,25190554-251906... 28 7.0
02_05_0202 + 26708049-26709074 28 7.0
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 7.0
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 28 9.2
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 28 9.2
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 366 bits (900), Expect = e-101
Identities = 164/244 (67%), Positives = 200/244 (81%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR
Sbjct: 25 LKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQR 84
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
+ VDGKVRTD TYPAGFMDVVSI KT E FRL+YD KGRF +H I E+AK+KLCKV+
Sbjct: 85 HVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRS 144
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
V G K +P+L T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+ M+TGGRN
Sbjct: 145 VQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRN 204
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 31
GRVG I SRE+H GSF+ +H++D+ GH FATR+ NVF IGK K ++SLP+GKGI+L+I
Sbjct: 205 TGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSI 264
Query: 30 AEEA 19
EEA
Sbjct: 265 IEEA 268
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 365 bits (897), Expect = e-101
Identities = 161/243 (66%), Positives = 200/243 (82%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+ QR
Sbjct: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQR 68
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
+ VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK+KLCKV+
Sbjct: 69 HVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRS 128
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
V G K +PYL T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+ M+TGGRN
Sbjct: 129 VQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRN 188
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 31
GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG K ++SLP+GKGI+L+I
Sbjct: 189 TGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGKGIKLSI 248
Query: 30 AEE 22
EE
Sbjct: 249 IEE 251
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 363 bits (894), Expect = e-101
Identities = 160/243 (65%), Positives = 200/243 (82%)
Frame = -2
Query: 750 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 571
LKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+ QR
Sbjct: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQR 68
Query: 570 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 391
+ VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK+KLCKV+
Sbjct: 69 HVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRS 128
Query: 390 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 211
V G K +PYL T+DGRTIRYPDP+IK ND+I++D+ T KI+DFIKF+ GN+ M+TGGRN
Sbjct: 129 VQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRN 188
Query: 210 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 31
GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG K ++SLP+GKGI+L+I
Sbjct: 189 TGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSI 248
Query: 30 AEE 22
EE
Sbjct: 249 IEE 251
>04_04_0040 + 22322839-22324173
Length = 444
Score = 31.9 bits (69), Expect = 0.57
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 175 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGSG 17
TSRL LR H H HG + RH++ +R R H L A G P + +G
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 0.99
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 630 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 731
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>05_03_0323 - 12424243-12424776
Length = 177
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 37 EADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHD-GAHAPQV 213
+ +A A QR+ + R H ++P G G G N G G + GH GAH V
Sbjct: 102 DGEATAREQREAQQRHNIAAAHAMRPHGRGRGNG----GNGRGRGSAGRGHAIGAHEDDV 157
Query: 214 TASRDHTQVPGLKLDEVHN 270
A Q G + HN
Sbjct: 158 DADFVLDQDDGHQRRRAHN 176
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 95 MNTLFNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 217
+N +F L V L+CT+ GC + +VP P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 617 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKRFNA 754
F L ++ + L G G+G Y PPSLSN + AFKR A
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKRAQA 79
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 83 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 178
PL NT+ +++A PVE L C +S + G L
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGGAL 456
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 380 DLRMFRTW*RMMAA-PSAIQTHLSKSTIPSS*TLQLRRL 267
DL R W +A PS HLS ++PSS T Q RRL
Sbjct: 208 DLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWRRL 246
>04_03_1015 - 21734381-21736534
Length = 717
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = -3
Query: 416 STSCVKSSVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTIPSS 291
S+S V S+V+ LR+ T R +AA I THL+ ST PS+
Sbjct: 38 SSSQVPSAVYASLLRL-ATSHRSLAAARRIATHLASSTAPST 78
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 83 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 178
PL NT+ +++A PVE L C +S + G L
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGGAL 445
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -1
Query: 733 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 569
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 197 APSCPARDI--PAPSTLCTSRTPRDTPSP 117
AP P+ D PAP T T +P TPSP
Sbjct: 70 APDAPSGDFFPPAPPTTTTPTSPGTTPSP 98
>08_02_1196 -
25190040-25190065,25190224-25190302,25190554-25190646,
25190761-25190892,25191578-25191721,25192941-25193150,
25194915-25195406
Length = 391
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 116 VAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPPVIIHKFPD 247
V KV PV+SL C + C+S + + PVI+ + D
Sbjct: 165 VLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYID 208
>02_05_0202 + 26708049-26709074
Length = 341
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 151 HNVEGAGMSLAGHDGAHAPQVTASRDHTQVPG 246
+ V +G +L GH +H A+ H Q PG
Sbjct: 268 YRVFASGQALGGHKKSHVCSAAAAAAHAQTPG 299
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 480 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 376
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
>06_03_1011 -
26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -2
Query: 354 THDGRTIRYPDPLIKVNDSI-QLDIA---TTKIMDFIKFESGNLCMITG 220
+HD + + PDPL ND I ++ IA T ++D+ + + C + G
Sbjct: 599 SHDDKVVSEPDPLPVHNDKIDEVTIAAIQTCALVDYQQSQQNKPCSVNG 647
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 61 AARQGHPPHHRRGSGTSA 8
AAR+GHPP H G G A
Sbjct: 4 AARRGHPPPHENGVGGHA 21
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,359,637
Number of Sequences: 37544
Number of extensions: 587983
Number of successful extensions: 2130
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2128
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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