Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o19f
(579 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33138| Best HMM Match : Mov34 (HMM E-Value=0) 59 2e-09
SB_45334| Best HMM Match : Mov34 (HMM E-Value=0.0076) 40 0.002
SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.010
SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19) 36 0.032
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 29 2.7
SB_45654| Best HMM Match : Extensin_2 (HMM E-Value=0.39) 29 2.7
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 28 4.8
SB_49095| Best HMM Match : UBX (HMM E-Value=0.26) 27 8.4
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 27 8.4
SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 27 8.4
SB_18056| Best HMM Match : Xan_ur_permease (HMM E-Value=0.96) 27 8.4
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 27 8.4
>SB_33138| Best HMM Match : Mov34 (HMM E-Value=0)
Length = 195
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/121 (27%), Positives = 60/121 (49%)
Frame = +1
Query: 121 QKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEI 300
+ +++S+ L + HA S E+MGL++G+V + +V ++ + + + +
Sbjct: 50 KNIKISALALLKMVMHARSGGNLEVMGLMLGKVDGDTMIVMDAFALPVEGTETRVNAQAA 109
Query: 301 SEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGI 480
+ E + E A VG+ +GWYHSHP W S +D+ TQ + Q+ FV I
Sbjct: 110 AYEYMAAYI----ESAKSVGRLENAIGWYHSHPGYGCWLSGIDVGTQMVNQQFQEPFVAI 165
Query: 481 I 483
+
Sbjct: 166 V 166
>SB_45334| Best HMM Match : Mov34 (HMM E-Value=0.0076)
Length = 174
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 316 VQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQR 456
V T +E+LA++ + VVGWYHSHP PS D+ TQ+ +Q+
Sbjct: 41 VSQTQASEKLASK---GMAVVGWYHSHPTFAPNPSVRDIETQAKFQQ 84
>SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 465
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = +1
Query: 367 LRVVGWYHSHPHITVWPSHVDLATQSMYQRM--------DASFVGIIFAVFLTDQSTKAP 522
+ +VGWYHSHP PS D+ +Q YQ +G+I + + T + TK
Sbjct: 1 MHLVGWYHSHPSYQADPSVQDIKSQLRYQHALQQGLSGPQEPCLGLIISPYDTYKPTKES 60
Query: 523 SVQITCFQSINEGASQS 573
+ + Q EG S
Sbjct: 61 TFRAFWVQRTQEGTPDS 77
>SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19)
Length = 431
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 367 LRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 483
L +GW H+HP T + S VDL T YQ M + I+
Sbjct: 333 LITLGWIHTHPTQTAFMSSVDLHTHCSYQLMMPEAIAIV 371
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 292 VEISEEQLVQATVRAEELAAEVGQPLRVVGW 384
+E++ E + A RAEE ++ +P +VVGW
Sbjct: 818 IELAHEIVSGAIERAEERPKKMNEPTQVVGW 848
>SB_45654| Best HMM Match : Extensin_2 (HMM E-Value=0.39)
Length = 301
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -2
Query: 359 PTSAANSSALTVA*TSCSSDISTRSGFLSKRRSITDDTIETSAPLS*TSPISKPMI 192
PT+ N A+ + ++ + G R ITDD E S P++ T P S P +
Sbjct: 33 PTTMFNKLAILILGVLATNLVPEVKGRPKWHRDITDDANEGSGPMNPTGPPSFPTL 88
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 28.3 bits (60), Expect = 4.8
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +1
Query: 88 ITITNINFEMLQKVRLSSDVALVCMQ-HALSTEKEEIMGLLIGEVHDNGALVSIVSSVIL 264
+TI+N F +K RL S + + + + T K+ + +LIGE +G I +
Sbjct: 706 LTISN-RFNR-EKRRLESALPIYARKSQIIQTIKDNQVTVLIGET-GSGKSTQIGQYLYD 762
Query: 265 RRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHP 399
L K ++ ++ + V AT A++++ E+GQ + + Y HP
Sbjct: 763 AGLADK-GQIVCTQPRKVAATSLAQQVSREMGQKVGKLVGYRQHP 806
>SB_49095| Best HMM Match : UBX (HMM E-Value=0.26)
Length = 267
Score = 27.5 bits (58), Expect = 8.4
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Frame = +1
Query: 172 LSTEKEEIMGLLIGEVHDNGALVSIVSSVILR--RLDKKPDRVEISEEQLV--QATVRAE 339
L T +E+ LIG + A+ + R+DK+ DR+ + EEQ V Q +R +
Sbjct: 46 LGTSREDNQSELIGTSEERKAIFKEQLEQLEESSRIDKEKDRLRLEEEQEVTKQEEIRQK 105
Query: 340 ELAAEVGQPL---RVVGWYHSHPHITVWPS--HVDLATQSMYQRMDASFVGIIFAVFLTD 504
+ +P + V HP + V HV + Q++Y + G + A L
Sbjct: 106 RRRRVLDEPAPGDQSVEVRIRHPRMGVLKRRFHVRSSVQAVY-----DWAGSVSATPLYF 160
Query: 505 QSTKAPSVQITCFQSINEGASQ 570
Q K P+ I I++ ++
Sbjct: 161 QLCKYPNTVIYPSDEISQACNE 182
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 223 DNGALVSIVSSVILRRLDKKPDRVE 297
D+GA S +SS +L +L+ KP RVE
Sbjct: 386 DSGAGSSYISSNLLTKLNLKPSRVE 410
>SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1019
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 223 DNGALVSIVSSVILRRLDKKPDRVE 297
D+GA S +SS +L +L+ KP RVE
Sbjct: 73 DSGAGSSYISSNLLTKLNLKPSRVE 97
>SB_18056| Best HMM Match : Xan_ur_permease (HMM E-Value=0.96)
Length = 651
Score = 27.5 bits (58), Expect = 8.4
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Frame = -2
Query: 377 TTLRGWPTSAANSSALTVA*TSCSSDISTRSGFLSKRRSI--TDDT--IETSAPLS*TSP 210
T G T+ +S LT + S + S R+ LS R++ T +T + TS S T
Sbjct: 403 TIFVGNMTTLVSSVNLTRSSLSTTLIPSIRTSILSYNRTVIVTPNTTRLVTSKISSFTVN 462
Query: 209 ISKPMISSFSVDNACCIQTKATSDDKRTFCSISKFIFVIVMRLNVTLF 66
+S +S N I TKA +D RT + + +I N+T +
Sbjct: 463 VSANSTTSLIQQNITLITTKAVNDTSRTTSTSAVVGTMITPSPNITSY 510
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 223 DNGALVSIVSSVILRRLDKKPDRVE 297
D+GA S +SS +L +L+ KP RVE
Sbjct: 280 DSGAGSSYISSNLLTKLNLKPSRVE 304
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,809,538
Number of Sequences: 59808
Number of extensions: 280443
Number of successful extensions: 726
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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