Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o18r
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 41 8e-04
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 37 0.012
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 37 0.012
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 37 0.012
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 33 0.20
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 33 0.20
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 33 0.20
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 33 0.20
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 31 0.80
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 31 0.80
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 31 0.80
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 31 1.1
Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 28 7.5
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 28 7.5
AC024881-7|AAK71417.1| 310|Caenorhabditis elegans Serpentine re... 28 7.5
AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical ... 28 7.5
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 27 9.9
CU457740-11|CAM36341.1| 353|Caenorhabditis elegans Hypothetical... 27 9.9
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 27 9.9
AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical ... 27 9.9
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -3
Query: 639 EYNINSMPTFVFVKNGKKLDEFSGAN 562
EY INSMPTF+ + +G K D+FSGAN
Sbjct: 69 EYEINSMPTFLLIVDGIKKDQFSGAN 94
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -3
Query: 636 YNINSMPTFVFVKNGKKLDEFSGAN 562
YNI++MPTF+F+KN +++D GAN
Sbjct: 71 YNISAMPTFIFLKNRQQVDMVRGAN 95
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -3
Query: 636 YNINSMPTFVFVKNGKKLDEFSGAN 562
YNI++MPTF+F+KN +++D GAN
Sbjct: 71 YNISAMPTFIFLKNRQQVDMVRGAN 95
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -3
Query: 636 YNINSMPTFVFVKNGKKLDEFSGAN 562
YNI++MPTF+F+KN +++D GAN
Sbjct: 7 YNISAMPTFIFLKNRQQVDMVRGAN 31
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 642 SEYNINSMPTFVFVKNGKKLDEFSGANVD 556
S+Y++ MPTF+F KNG ++ G D
Sbjct: 74 SKYDVKMMPTFIFTKNGDAIEALEGCVED 102
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 642 SEYNINSMPTFVFVKNGKKLDEFSGANVD 556
S+Y++ MPTF+F KNG ++ G D
Sbjct: 73 SKYDVKMMPTFIFTKNGDAIEALEGCVED 101
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 642 SEYNINSMPTFVFVKNGKKLDEFSGANVD 556
S+Y++ MPTF+F KNG ++ G D
Sbjct: 73 SKYDVKMMPTFIFTKNGDAIEALEGCVED 101
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 642 SEYNINSMPTFVFVKNGKKLDEFSGANVD 556
S+Y++ MPTF+F KNG ++ G D
Sbjct: 74 SKYDVKMMPTFIFTKNGDAIEALEGCVED 102
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 31.1 bits (67), Expect = 0.80
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = -3
Query: 645 ASEYNINSMPTFVFVKNGKKLDEFSGAN 562
+SE +NSMPTF+ ++G ++++ GA+
Sbjct: 67 SSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 31.1 bits (67), Expect = 0.80
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = -3
Query: 645 ASEYNINSMPTFVFVKNGKKLDEFSGAN 562
+SE +NSMPTF+ ++G ++++ GA+
Sbjct: 67 SSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 31.1 bits (67), Expect = 0.80
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = -3
Query: 645 ASEYNINSMPTFVFVKNGKKLDEFSGAN 562
+SE +NSMPTF+ ++G ++++ GA+
Sbjct: 67 SSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 645 ASEYNINSMPTFVFVKNGKKLDEFSGAN 562
A+ Y +N+MPTF+ NG+K GA+
Sbjct: 67 AATYGVNAMPTFIAFVNGQKKATIQGAD 94
>Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical
protein B0024.9 protein.
Length = 119
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 645 ASEYNINSMPTFVFVKNGKKLDEFSG 568
A +Y I+++PT KNG+K+ FSG
Sbjct: 77 AMDYGISAVPTVFAFKNGEKISGFSG 102
>Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical
protein F55A11.7 protein.
Length = 395
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = -2
Query: 286 YFYFGFFYQVVAKEL*CMNCYVFIFIFVRLTQMYNLTNTNQCVR*VSIVLLKTFVSNKYH 107
YF +G F + CYVF+F FV LT M+ + + ++ +S
Sbjct: 215 YFKYGSFVDFCRRYYIQHLCYVFLFAFV-LT-MFGIAFHGSLIFHETVEFATIVLSVL-- 270
Query: 106 NVFFFYVMQVEACFF 62
FFF+V+ V AC F
Sbjct: 271 -AFFFFVLFVGACIF 284
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 636 YNINSMPTFVFVKNGKKLDEFSG 568
+ I + PT VF NGK++D G
Sbjct: 69 FKITAAPTLVFFSNGKEVDRIDG 91
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 636 YNINSMPTFVFVKNGKKLDEFSG 568
+ I + PT VF NGK++D G
Sbjct: 69 FKITAAPTLVFFSNGKEVDRIDG 91
>AC024881-7|AAK71417.1| 310|Caenorhabditis elegans Serpentine
receptor, class sx protein3 protein.
Length = 310
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = -1
Query: 428 VFNVCNEFEDINFLCL---QP-LECKKYWFCC 345
VFNV F +INFLCL +P L K Y+ C
Sbjct: 19 VFNVLGLFGNINFLCLTYIKPALRSKSYYIQC 50
>AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical
protein Y76B12C.1 protein.
Length = 832
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 369 FQRLQTQKINIFKFITD-VKNIFYSFIKNVYMFFFFNSILVSIG 497
FQ+ QT I +TD + ++Y ++ FF++ + ++SIG
Sbjct: 198 FQQRQTGFTQIKDILTDKCRKLYYFYVTENSTFFYYWTAIISIG 241
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -2
Query: 208 FVRLTQMYNLTNTNQCVR*VSIVLLKTFVSNKYHNVFFFYVMQVEACFFNAVLMRL 41
F+ + + + T+QC +VLL T + + H+ FF+V+ C +A+ M L
Sbjct: 189 FLTILSSFGYSLTSQC-----LVLLLTSLFHSSHDHLFFFVLLASFCVPSALRMGL 239
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 321 FYLLNCLITTEPIFFAFQRLQTQKINIFKFITDVKNIFYSFIKNVYMFFFFNSILVSIGG 500
+ + N +I TE RL +N + V + S+ N Y + ++I +G
Sbjct: 185 YMVTNFVILTEAFELPKSRLLVVSLNGWSVSMAVTALAASYTLNWYAY---HTIFAIVGA 241
Query: 501 CVQL*SLFTC 530
C+ + SL TC
Sbjct: 242 CIAIISLATC 251
>CU457740-11|CAM36341.1| 353|Caenorhabditis elegans Hypothetical
protein C50E10.11 protein.
Length = 353
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 409 NLKILIFCVCSLWNAKNIGSVVIK 338
NL ILIF V W+A IG + IK
Sbjct: 58 NLNILIFIVIFSWSASAIGRLFIK 81
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 424 LTSVMNLKILIFCVCSLW 371
+ S++NL I +FCVC +W
Sbjct: 53 VVSLINLVIQLFCVCFIW 70
>AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical
protein D2063.2 protein.
Length = 643
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Frame = -3
Query: 285 ISILVF--FTKWLLR--NFNV*IVMFLFLFLSGLL 193
++I++F F KW L+ N N+ +++ F LSG+L
Sbjct: 315 LAIIIFETFEKWYLQLANLNICVLIIAFFMLSGML 349
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,760,181
Number of Sequences: 27780
Number of extensions: 298922
Number of successful extensions: 801
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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