Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o18f
(483 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 71 3e-13
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 69 2e-12
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 68 4e-12
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 68 4e-12
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 66 9e-12
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 64 5e-11
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 64 6e-11
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 64 6e-11
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 62 1e-10
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 62 3e-10
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 61 3e-10
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 61 4e-10
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 61 4e-10
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 58 3e-09
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 58 3e-09
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 54 4e-08
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 53 9e-08
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 51 4e-07
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 50 8e-07
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 49 2e-06
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 47 8e-06
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 46 1e-05
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 46 2e-05
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 46 2e-05
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 45 3e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 45 3e-05
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 44 7e-05
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 44 7e-05
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 43 9e-05
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 42 2e-04
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 42 3e-04
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 41 5e-04
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 41 5e-04
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 40 9e-04
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 40 9e-04
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 40 0.001
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 39 0.002
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 38 0.004
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 38 0.005
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 38 0.005
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 38 0.005
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 38 0.005
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 37 0.006
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 37 0.008
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 37 0.008
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 36 0.014
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 36 0.019
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 36 0.019
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 34 0.044
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 33 0.076
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 33 0.076
At3g03860.1 68416.m00398 expressed protein 33 0.13
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 33 0.13
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 33 0.13
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 33 0.13
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 32 0.23
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 29 1.6
At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase f... 28 2.9
At4g31240.2 68417.m04435 expressed protein 28 3.8
At4g31240.1 68417.m04434 expressed protein 28 3.8
At1g78740.1 68414.m09177 hypothetical protein 27 5.0
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 27 5.0
At2g29040.1 68415.m03530 exostosin family protein contains Pfam ... 27 6.6
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 71.3 bits (167), Expect = 3e-13
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +2
Query: 113 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 292
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A +
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
Query: 293 XXXASEYNINSMPTFVFVKNGKKLDEFSGAN 385
A E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 72 QSVAKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 68.9 bits (161), Expect = 2e-12
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Frame = +2
Query: 110 IHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 283
+ IK+ + K+RL D KL+VI+F A WCGPCK + PKL+E+AA+
Sbjct: 40 VEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVKIDVD 99
Query: 284 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 391
E+N++++P VF+K G+++D G VD
Sbjct: 100 VLMSVW-MEFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 67.7 bits (158), Expect = 4e-12
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +2
Query: 104 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 283
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A +
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDID 332
Query: 284 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 385
AS +NI+S+PTF F+++GK++D+ GA+
Sbjct: 333 KANDVAAS-WNISSVPTFCFIRDGKEVDKVVGAD 365
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 67.7 bits (158), Expect = 4e-12
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +2
Query: 146 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 325
L + DK V++DF ATWCGPC+++ P L+E++ + A++Y I +
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEA 130
Query: 326 MPTFVFVKNGKKLDEFSGA 382
+PTF+ K+GK D F GA
Sbjct: 131 LPTFILFKDGKLWDRFEGA 149
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 66.5 bits (155), Expect = 9e-12
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +2
Query: 161 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 340
+KL+V+DF A+WCGPC+MI P + + A+ A E+N+ +MPTFV
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAM-ADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFV 105
Query: 341 FVKNGKKLDEFSGANVD 391
VK GK+++ GA D
Sbjct: 106 LVKRGKEIERIIGAKKD 122
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 64.1 bits (149), Expect = 5e-11
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = +2
Query: 110 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 289
I K+S D K A+ K+VV +F ATWCGPCK++ P E+ +E
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIEL-SEKHSSLMFLLVDVDE 86
Query: 290 XXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 385
+S ++I + PTF F+KNG+++ + GAN
Sbjct: 87 LSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 63.7 bits (148), Expect = 6e-11
Identities = 32/96 (33%), Positives = 52/96 (54%)
Frame = +2
Query: 104 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 283
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDT 67
Query: 284 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 391
AS++ I +MPTF+F+K GK LD+ GA D
Sbjct: 68 DELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKD 103
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 63.7 bits (148), Expect = 6e-11
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +2
Query: 161 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 340
DK V++D+ ATWCGPC+ + P L+E++ + A++Y I ++PTF+
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKYKIEALPTFI 140
Query: 341 FVKNGKKLDEFSGA 382
K+G+ D F GA
Sbjct: 141 LFKDGEPCDRFEGA 154
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 62.5 bits (145), Expect = 1e-10
Identities = 30/90 (33%), Positives = 43/90 (47%)
Frame = +2
Query: 122 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 301
D D + AGDK+VV+D WCGPCK+I PK E++ +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPL 143
Query: 302 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 391
A E I +PTF +K+ K + E +GA +
Sbjct: 144 AKELGIRVVPTFKILKDNKVVKEVTGAKYE 173
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +2
Query: 152 EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 331
+ +KL+VIDF A WCGPCK + P++ EIA++ A Y ++P
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASK-YSEAVFARVDVDRLMDVAGTYRAITLP 98
Query: 332 TFVFVKNGKKLDEFSGANVD 391
FVFVK G+++D GA D
Sbjct: 99 AFVFVKRGEEIDRVVGAKPD 118
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 61.3 bits (142), Expect = 3e-10
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +2
Query: 137 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 316
K + A KL+VIDF A+WC PC+ I P E+A + A E+
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKF-TNVVFFKIDVDELQAVAQEFK 77
Query: 317 INSMPTFVFVKNGKKLDEFSGANVD 391
+ +MPTFVF+K G +D GA D
Sbjct: 78 VEAMPTFVFMKEGNIIDRVVGAAKD 102
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 60.9 bits (141), Expect = 4e-10
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = +2
Query: 113 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 292
++ DS+ +T++ E+ D V+++F A WCGPC+MI P +D++A +
Sbjct: 90 NLSDSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDES 147
Query: 293 XXXASEYNINSMPTFVFVKNGKKLDEFSGA 382
A+ Y I S+PT + K G+K D GA
Sbjct: 148 PNTANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 60.9 bits (141), Expect = 4e-10
Identities = 30/90 (33%), Positives = 42/90 (46%)
Frame = +2
Query: 122 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 301
D D + AG+KLVV+D WCGPCK+I PK ++ +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPL 133
Query: 302 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 391
A E I +PTF +K+ K + E +GA D
Sbjct: 134 AKELGIRVVPTFKILKDNKVVKEVTGAKYD 163
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 58.0 bits (134), Expect = 3e-09
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +2
Query: 137 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 316
K + A KL+VIDF ATWC PC+ I P ++ A+ A E+
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADL-AKKHLDVVFFKVDVDELNTVAEEFK 77
Query: 317 INSMPTFVFVKNGKKLDEFSGA 382
+ +MPTF+F+K G+ + GA
Sbjct: 78 VQAMPTFIFMKEGEIKETVVGA 99
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 58.0 bits (134), Expect = 3e-09
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +2
Query: 125 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA 304
+D L D+ V +DF A WCGPCKMI P ++E+A +
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATP 139
Query: 305 SEYNINSMPTFVFVKNGKKLDEFSGA 382
+Y + S+PT + NG+K D GA
Sbjct: 140 GQYGVRSIPTIMIFVNGEKKDTIIGA 165
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 54.4 bits (125), Expect = 4e-08
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 349
VV+DF A WCGPCKMI P ++++A +Y + S+PT +
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFV 160
Query: 350 NGKKLDEFSGA 382
G+K D GA
Sbjct: 161 GGEKKDTIIGA 171
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 53.2 bits (122), Expect = 9e-08
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 349
V+++F +WCGPC+M+ +DEIA + A EY I ++P + K
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFK 146
Query: 350 NGKKLDEFSG 379
NG+K + G
Sbjct: 147 NGEKRESIMG 156
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 51.2 bits (117), Expect = 4e-07
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 349
V+++F+ATWCGPCK+I P ++ ++ E +E+ + +P F+ K
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFK 149
Query: 350 NGKKL 364
+GK++
Sbjct: 150 DGKEV 154
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 50.0 bits (114), Expect = 8e-07
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +2
Query: 98 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 247
P M I I ++ L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +2
Query: 92 YLPKMSIH-IKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXX 262
Y K +H + + + ++ EA K++V++F A+WC P K I P E+A+
Sbjct: 36 YFIKGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELAS-TYTSM 94
Query: 263 XXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 385
+ E+N+++ PT VF+K+G+++D+ G +
Sbjct: 95 IFVTIDVEELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGD 135
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 46.8 bits (106), Expect = 8e-06
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +2
Query: 116 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 289
+K ++ +++A D + V F A WCGPC+ I P + E++ +
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPDVTTYKVDIDEG 148
Query: 290 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 388
S+ NI ++PT F K G K E GA+V
Sbjct: 149 GISNTISKLNITAVPTLHFFKGGSKKGEVVGADV 182
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +2
Query: 116 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 295
+ DL L AGDKLVV+DF + CG CK + PK+ +I AE
Sbjct: 98 VTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKI-AEKNPEVEFLQVNYEEHR 156
Query: 296 XXASEYNINSMPTFVFVKNGK-KLDEFSGAN 385
NI+ +P F F + ++ FS N
Sbjct: 157 SLCQSLNIHVLPFFRFYRGSSGRVCSFSCTN 187
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 98 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 277
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 278 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 376
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 98 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 277
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 278 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 376
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 44.8 bits (101), Expect = 3e-05
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +2
Query: 116 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 289
+K + + L++A D + V F A WCGPC++I P + E++ +
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPDVTTYKVDIDEG 113
Query: 290 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 388
A + N++++PT F K G K E G +V
Sbjct: 114 GLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDV 147
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 116 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 295
I + +L L AGDKLVV+DF + CG CK + PK+ + AEM
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDVQFLQVNYEEHK 160
Query: 296 XXASEYNINSMPTFVFVKNGK-KLDEFSGAN 385
++ +P F F + + ++ FS N
Sbjct: 161 SMCYSLGVHVLPFFRFYRGSQGRVCSFSCTN 191
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 43.6 bits (98), Expect = 7e-05
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 110 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 289
+ I+ ++ L L AGD+LVV+DF + CG CK + PK+ ++ AE
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQL-AETNPNVMFLKVNQEE 146
Query: 290 XXXXASEYNINSMPTFVFVKNGK-KLDEFS 376
N++ +P F F + + K+ FS
Sbjct: 147 LRTMCHGLNVHVLPFFKFYRGAEGKVCSFS 176
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 43.6 bits (98), Expect = 7e-05
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 188 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 367
A WC PCK I P ++A+ ++E+N+ + PT VF+K+G+++D
Sbjct: 17 APWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEF-SNEWNVEATPTVVFLKDGRQMD 75
Query: 368 EFSGA 382
+ GA
Sbjct: 76 KLVGA 80
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 43.2 bits (97), Expect = 9e-05
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 158 GDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 331
GD+ V ++DF ATWCGPC ++ +L+ +A E A + + +P
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYEFARDMQVRGLP 150
Query: 332 TFVFV 346
T F+
Sbjct: 151 TLFFI 155
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 349
+V F A WC P + +E+A AS+ + +MPTF+F+K
Sbjct: 27 IVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVDVDEVKEV-ASQLEVKAMPTFLFLK 85
Query: 350 NGKKLDEFSGANVD 391
+G +D+ GAN D
Sbjct: 86 DGNAMDKLVGANPD 99
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 334
+V++F A WCG C+ + P+ ++ A+E+ A+EY I PT
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPT 108
Query: 335 FVFVKN-GKKLDEFSG 379
++N GK + +++G
Sbjct: 109 LKILRNGGKSVQDYNG 124
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Frame = +2
Query: 83 VSIYLPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGPKLDEIA 241
V+++ I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 357 VAVHKKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 167 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 346
+V+++F A WCG CK + P +++A + A +Y I PT
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAIDADAHQSAAQDYGIKGFPTIKVF 109
Query: 347 KNGKKLDEFSGA 382
GK ++ GA
Sbjct: 110 VPGKAPIDYQGA 121
Score = 33.5 bits (73), Expect = 0.076
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = +2
Query: 161 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 340
++L +++F A WCG CK + P+ A + S + + PT +
Sbjct: 180 NELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKVKLGHVNCDVEQSIMSRFKVQGFPTIL 239
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 40.7 bits (91), Expect = 5e-04
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 349
V++ F A WCGPC+ + P L+++ +E ++I+ +PT + K
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFK 289
Query: 350 NGKKLDEFSGAN 385
G+++ + +GA+
Sbjct: 290 GGEQMAKVTGAD 301
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 39.9 bits (89), Expect = 9e-04
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 334
+V++F A WCG CK + P+ ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 335 F-VFVKNGKKLDEFSG 379
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 125 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 241
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 39.9 bits (89), Expect = 9e-04
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 334
+V++F A WCG CK + P+ ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 335 F-VFVKNGKKLDEFSG 379
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 125 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 241
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +2
Query: 167 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 346
+V+++F A WCG C+ + P +++A+ + + +Y + PT
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFPTIKVF 107
Query: 347 KNGKKLDEFSGA 382
GK ++ GA
Sbjct: 108 VPGKPPIDYQGA 119
Score = 35.5 bits (78), Expect = 0.019
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Frame = +2
Query: 98 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXX 271
P S+ + S D+L T E L +++F A WCG CK + P+ + A +
Sbjct: 162 PSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLG 217
Query: 272 XXXXXXXXXXASEYNINSMPTFVFVKNGK 358
S + + PT + + K
Sbjct: 218 HVNCDAEQSIKSRFKVQGFPTILVFGSDK 246
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLD---EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 340
+ +DF A WCG CK + P+LD I A++ A + I++ PT +
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNADKYSRLARKIEIDAFPTLM 111
Query: 341 FVKNGKKLDEFSGANVD 391
+G ++ + D
Sbjct: 112 LYNHGVPMEYYGPRKAD 128
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 346
VVI +MA WC C + PKL+++AAE S + MPT
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLW 160
Query: 347 KNGKKLDEFSGAN 385
++G+K E G +
Sbjct: 161 RDGQKQAEVIGGH 173
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 161 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 337
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 338 VFVKNGK 358
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 30.7 bits (66), Expect = 0.54
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +2
Query: 164 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 343
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 344 VKNGKKLDE 370
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 161 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 337
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 338 VFVKNGK 358
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 30.7 bits (66), Expect = 0.54
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +2
Query: 164 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 343
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 344 VKNGKKLDE 370
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 346
++I++MA+WC C + PKL+++AAE NI+ MPT
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLW 180
Query: 347 KNGKKLDEFSGAN 385
K + +E G +
Sbjct: 181 KEDEMKEEVIGGH 193
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 170 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 349
VV+ F A+WC K + +A + + Y++ ++P FVF K
Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPRAHFFRVEAEEHPEI-SEAYSVAAVPYFVFFK 82
Query: 350 NGKKLDEFSGAN 385
+GK +D GA+
Sbjct: 83 DGKTVDTLEGAD 94
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +2
Query: 158 GDKLVVIDFMATWCGPCKMIGP---KLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 328
G KL+V+D CGPC + P KL +E + N+ +
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETVVFARMNGDENDSCMEFLKDMNVIEV 265
Query: 329 PTFVFVKNGKKLDEFSGA 382
PTF+F+++G+ + G+
Sbjct: 266 PTFLFIRDGEIRGRYVGS 283
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/73 (21%), Positives = 28/73 (38%)
Frame = +2
Query: 161 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 340
+ +++F A WCG C+ + P+ A E+ A +Y I PT
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATELKGLAALAKIDATEEGDLAQKYEIQGFPTVF 175
Query: 341 FVKNGKKLDEFSG 379
+G+ + G
Sbjct: 176 LFVDGEMRKTYEG 188
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/76 (19%), Positives = 27/76 (35%)
Frame = +2
Query: 164 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 343
K V+++ A WCG C+ P +++ + + PT +F
Sbjct: 456 KDVLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDSLVVAKMDGTSNEHPRAKADGFPTILF 515
Query: 344 VKNGKKLDEFSGANVD 391
G K + +VD
Sbjct: 516 FPGGNKSFDPIAVDVD 531
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 36.7 bits (81), Expect = 0.008
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +2
Query: 128 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXAS 307
DD+K+ + A VI++ A+WCG C I P +++ +
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFSKLKFVYADIDECPE---T 88
Query: 308 EYNINSMPTFVFVKNGKKLDEFSGA 382
+I PTF F ++G+K+DE GA
Sbjct: 89 TRHIRYTPTFQFYRDGEKVDEMFGA 113
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 35.9 bits (79), Expect = 0.014
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +2
Query: 104 MSIHIKD--SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 277
MS +KD S + L +G LV + F A+WC K + +A +
Sbjct: 1 MSGTVKDIVSKEELDNLRHSGAPLV-LHFWASWCDASKQMDQVFSHLATDFPRAHFFRVE 59
Query: 278 XXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 385
+ Y++ +P FVF K+GK +D GA+
Sbjct: 60 AEEHPEI-SEAYSVALVPYFVFFKDGKTVDTLEGAD 94
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 35.5 bits (78), Expect = 0.019
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 161 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 334
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 335 F-VFVKNGKKLDEFSG 379
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
Score = 34.7 bits (76), Expect = 0.033
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 161 DKLVVIDFMATWCGPCKMIGPKLDEIAA 244
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 35.5 bits (78), Expect = 0.019
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 161 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 334
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 335 F-VFVKNGKKLDEFSG 379
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
Score = 34.7 bits (76), Expect = 0.033
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 161 DKLVVIDFMATWCGPCKMIGPKLDEIAA 244
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 34.3 bits (75), Expect = 0.044
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 113 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEI 238
++ D K +++ K +++ F A WC PC+ PKL E+
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEV 388
Score = 32.7 bits (71), Expect = 0.13
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 164 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 250
K + + F A WCGPC+ P+L E+ E+
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 33.5 bits (73), Expect = 0.076
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +2
Query: 119 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIA-------AEMXXXXXXX 271
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 163
Query: 272 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 376
A I ++P F F KNG L+ F+
Sbjct: 164 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 198
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 33.5 bits (73), Expect = 0.076
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +2
Query: 119 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIA-------AEMXXXXXXX 271
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 150
Query: 272 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 376
A I ++P F F KNG L+ F+
Sbjct: 151 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 185
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 32.7 bits (71), Expect = 0.13
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +2
Query: 32 CHLRVSYLHFKL*YYFLVSIYLPKMSIHIKDSDDLKTRLA-EAGDKLVVIDFMATWCGPC 208
C+ F L S+Y P I + D D L +A + G+ + + F A+WC
Sbjct: 32 CNYEFELFRFDLEAKCPPSLY-PTPPIEV-DGDSLDRLMASQHGNAYMSVLFYASWCPFS 89
Query: 209 KMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 346
+ + PK D +++ S Y I+S+P+ + V
Sbjct: 90 RAVRPKFDMLSSMFPQIQHLAVEHSQALPSVFSRYGIHSLPSILMV 135
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Frame = +2
Query: 83 VSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXX 262
+ I L K + + ++ E D + F WC CK +G +++ M
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEK-DTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDD 76
Query: 263 XXXXXXXXXXXXXA--SEYNINSMPTFVFVKNGKKLDEFSG 379
A ++ I+S PTF+ NG+++ ++ G
Sbjct: 77 EIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKG 117
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Frame = +2
Query: 83 VSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXX 262
+ I L K + + ++ E D + F WC CK +G +++ M
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEK-DTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDD 76
Query: 263 XXXXXXXXXXXXXA--SEYNINSMPTFVFVKNGKKLDEFSG 379
A ++ I+S PTF+ NG+++ ++ G
Sbjct: 77 EIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKG 117
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Frame = +2
Query: 83 VSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXX 262
+ I L K + + ++ E D + F WC CK +G +++ M
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEK-DTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDD 76
Query: 263 XXXXXXXXXXXXXA--SEYNINSMPTFVFVKNGKKLDEFSG 379
A ++ I+S PTF+ NG+++ ++ G
Sbjct: 77 EIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKG 117
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 31.9 bits (69), Expect = 0.23
Identities = 17/82 (20%), Positives = 32/82 (39%)
Frame = +2
Query: 143 RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNIN 322
+L +++++ + + CGPC+ + P L+++ E A I
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAAGIM 495
Query: 323 SMPTFVFVKNGKKLDEFSGANV 388
P F KN + L SG +
Sbjct: 496 GTPCVQFFKNKEMLRTISGVKM 517
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 119 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMI 217
K D+L + L ++ + LVV+DF T CG CK I
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYI 125
>At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase
family protein contains Pfam PF01553: Acyltransferase
Length = 376
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/52 (23%), Positives = 29/52 (55%)
Frame = +2
Query: 71 YYFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPK 226
+ +S+++P ++ +K D L+ ++ +++ F+A+W G K GP+
Sbjct: 108 WIIFLSLFIPVNAL-LKGQDRLRKKIERVLVEMICSFFVASWTGVVKYHGPR 158
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 164 KLVVIDFMATWCGPCKMIGPKL 229
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 164 KLVVIDFMATWCGPCKMIGPKL 229
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At1g78740.1 68414.m09177 hypothetical protein
Length = 306
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 429 SIYLCLRIVVLSLSTLA-PENSSSFLPFLTKTNVG 328
+IY+C +V L LST+ P S LPFL +G
Sbjct: 94 TIYICESLVSLKLSTVTLPSVKSVSLPFLRVLKLG 128
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +2
Query: 158 GDKLVVIDFMATWCGPCKMIGPKLDEIAA---EMXXXXXXXXXXXXXXXXXASEYNINSM 328
G++ V++ A WC + P+ E A E+ ASE I
Sbjct: 93 GNEFVMVLGYAPWCARSAELMPRFAEAATALKEIGSSVLMAKIDGDRYSKIASELEIKGF 152
Query: 329 PTFVFVKNGKKLDEFSGANVD 391
PT + NG L G++ +
Sbjct: 153 PTLLLFVNGTSLTYNGGSSAE 173
>At2g29040.1 68415.m03530 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 720
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 67 VILFFSFNLSAQDVHSHQRFRRPED 141
++L + F+ SA+ VH+H+R R E+
Sbjct: 26 LVLLYLFSSSAKTVHNHERLFRQEN 50
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,136,398
Number of Sequences: 28952
Number of extensions: 157563
Number of successful extensions: 524
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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