Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10o13r
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   0.81 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   0.81 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.3  

>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -2

Query: 498 RIYTLFSFG--ITYLVCICRFMGR 433
           RIY  +SFG  I   VC+C F G+
Sbjct: 319 RIYFYWSFGFLIVRTVCLCLFGGK 342


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -2

Query: 498 RIYTLFSFG--ITYLVCICRFMGR 433
           RIY  +SFG  I   VC+C F G+
Sbjct: 319 RIYFYWSFGFLIVRTVCLCLFGGK 342


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = -2

Query: 498 RIYTLFSFG--ITYLVCICRF 442
           R+Y  +SF   IT +VC+C F
Sbjct: 317 RLYFYWSFALLITRIVCLCLF 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,388
Number of Sequences: 336
Number of extensions: 3033
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)