Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10o13r
         (718 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M15353-1|AAC13647.1|  217|Homo sapiens cap-binding protein protein.    85   2e-16
BC107715-1|AAI07716.1|  217|Homo sapiens eukaryotic translation ...    85   2e-16
BC043226-1|AAH43226.1|  217|Homo sapiens eukaryotic translation ...    85   2e-16
BC035166-1|AAH35166.1|  217|Homo sapiens eukaryotic translation ...    85   2e-16
BC012611-1|AAH12611.1|  217|Homo sapiens eukaryotic translation ...    85   2e-16
AB209519-1|BAD92756.1|  243|Homo sapiens eukaryotic translation ...    47   6e-05
BC021690-1|AAH21690.1|  245|Homo sapiens eukaryotic translation ...    44   4e-04
BC021226-1|AAH21226.1|  245|Homo sapiens eukaryotic translation ...    44   4e-04
BC005874-1|AAH05874.1|  245|Homo sapiens eukaryotic translation ...    44   4e-04
BC005392-1|AAH05392.1|  245|Homo sapiens eukaryotic translation ...    44   4e-04
AF068117-1|AAC19374.1|  245|Homo sapiens eIF4E-like protein 4E-L...    44   4e-04
AF047695-1|AAC18565.1|  245|Homo sapiens cap-binding protein 4EH...    44   4e-04
AC092165-5|AAY24105.1|  245|Homo sapiens unknown protein.              44   4e-04

>M15353-1|AAC13647.1|  217|Homo sapiens cap-binding protein protein.
          Length = 217

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = -1

Query: 715 LIGENFEN-SDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IG 545
           LIGE+F++ SD++CGAVVNVR K DKIAIWT +   + A   IG+  KE+LG+  K  IG
Sbjct: 137 LIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIG 196

Query: 544 FQVHRDTMVKHSSATKNLYTV 482
           +Q H DT  K  S TKN + V
Sbjct: 197 YQSHADTATKSGSTTKNRFVV 217


>BC107715-1|AAI07716.1|  217|Homo sapiens eukaryotic translation
           initiation factor 4E protein.
          Length = 217

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = -1

Query: 715 LIGENFEN-SDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IG 545
           LIGE+F++ SD++CGAVVNVR K DKIAIWT +   + A   IG+  KE+LG+  K  IG
Sbjct: 137 LIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIG 196

Query: 544 FQVHRDTMVKHSSATKNLYTV 482
           +Q H DT  K  S TKN + V
Sbjct: 197 YQSHADTATKSGSTTKNRFVV 217


>BC043226-1|AAH43226.1|  217|Homo sapiens eukaryotic translation
           initiation factor 4E protein.
          Length = 217

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = -1

Query: 715 LIGENFEN-SDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IG 545
           LIGE+F++ SD++CGAVVNVR K DKIAIWT +   + A   IG+  KE+LG+  K  IG
Sbjct: 137 LIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIG 196

Query: 544 FQVHRDTMVKHSSATKNLYTV 482
           +Q H DT  K  S TKN + V
Sbjct: 197 YQSHADTATKSGSTTKNRFVV 217


>BC035166-1|AAH35166.1|  217|Homo sapiens eukaryotic translation
           initiation factor 4E protein.
          Length = 217

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = -1

Query: 715 LIGENFEN-SDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IG 545
           LIGE+F++ SD++CGAVVNVR K DKIAIWT +   + A   IG+  KE+LG+  K  IG
Sbjct: 137 LIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIG 196

Query: 544 FQVHRDTMVKHSSATKNLYTV 482
           +Q H DT  K  S TKN + V
Sbjct: 197 YQSHADTATKSGSTTKNRFVV 217


>BC012611-1|AAH12611.1|  217|Homo sapiens eukaryotic translation
           initiation factor 4E protein.
          Length = 217

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = -1

Query: 715 LIGENFEN-SDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IG 545
           LIGE+F++ SD++CGAVVNVR K DKIAIWT +   + A   IG+  KE+LG+  K  IG
Sbjct: 137 LIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIG 196

Query: 544 FQVHRDTMVKHSSATKNLYTV 482
           +Q H DT  K  S TKN + V
Sbjct: 197 YQSHADTATKSGSTTKNRFVV 217


>AB209519-1|BAD92756.1|  243|Homo sapiens eukaryotic translation
           initiation factor 4E member 2 variant protein.
          Length = 243

 Score = 47.2 bits (107), Expect = 6e-05
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = -1

Query: 715 LIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGI--HGKIGF 542
           ++GE F   +EICGAVV+VR + D I+IW   A  Q  T  I   L+  L +  +  + +
Sbjct: 164 MLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEY 223

Query: 541 QVHRDTMVKHSSATKN 494
           + H D+ +K +S+ +N
Sbjct: 224 KTHTDS-IKDNSSFRN 238


>BC021690-1|AAH21690.1|  245|Homo sapiens eukaryotic translation
           initiation factor 4E family member 2 protein.
          Length = 245

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = -1

Query: 715 LIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGI--HGKIGF 542
           ++GE F   +EICGAVV+VR + D I+IW   A  Q  T  I   L+  L +  +  + +
Sbjct: 155 MLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEY 214

Query: 541 QVHRDTM 521
           + H D++
Sbjct: 215 KTHTDSI 221


>BC021226-1|AAH21226.1|  245|Homo sapiens eukaryotic translation
           initiation factor 4E family member 2 protein.
          Length = 245

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = -1

Query: 715 LIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGI--HGKIGF 542
           ++GE F   +EICGAVV+VR + D I+IW   A  Q  T  I   L+  L +  +  + +
Sbjct: 155 MLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEY 214

Query: 541 QVHRDTM 521
           + H D++
Sbjct: 215 KTHTDSI 221


>BC005874-1|AAH05874.1|  245|Homo sapiens eukaryotic translation
           initiation factor 4E family member 2 protein.
          Length = 245

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = -1

Query: 715 LIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGI--HGKIGF 542
           ++GE F   +EICGAVV+VR + D I+IW   A  Q  T  I   L+  L +  +  + +
Sbjct: 155 MLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEY 214

Query: 541 QVHRDTM 521
           + H D++
Sbjct: 215 KTHTDSI 221


>BC005392-1|AAH05392.1|  245|Homo sapiens eukaryotic translation
           initiation factor 4E family member 2 protein.
          Length = 245

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = -1

Query: 715 LIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGI--HGKIGF 542
           ++GE F   +EICGAVV+VR + D I+IW   A  Q  T  I   L+  L +  +  + +
Sbjct: 155 MLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEY 214

Query: 541 QVHRDTM 521
           + H D++
Sbjct: 215 KTHTDSI 221


>AF068117-1|AAC19374.1|  245|Homo sapiens eIF4E-like protein 4E-LP
           protein.
          Length = 245

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = -1

Query: 715 LIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGI--HGKIGF 542
           ++GE F   +EICGAVV+VR + D I+IW   A  Q  T  I   L+  L +  +  + +
Sbjct: 155 MLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEY 214

Query: 541 QVHRDTM 521
           + H D++
Sbjct: 215 KTHTDSI 221


>AF047695-1|AAC18565.1|  245|Homo sapiens cap-binding protein 4EHP
           protein.
          Length = 245

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = -1

Query: 715 LIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGI--HGKIGF 542
           ++GE F   +EICGAVV+VR + D I+IW   A  Q  T  I   L+  L +  +  + +
Sbjct: 155 MLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEY 214

Query: 541 QVHRDTM 521
           + H D++
Sbjct: 215 KTHTDSI 221


>AC092165-5|AAY24105.1|  245|Homo sapiens unknown protein.
          Length = 245

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = -1

Query: 715 LIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGI--HGKIGF 542
           ++GE F   +EICGAVV+VR + D I+IW   A  Q  T  I   L+  L +  +  + +
Sbjct: 155 MLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEY 214

Query: 541 QVHRDTM 521
           + H D++
Sbjct: 215 KTHTDSI 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,362,816
Number of Sequences: 237096
Number of extensions: 1590092
Number of successful extensions: 2161
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2156
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)