Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10o10r
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70311-11|CAA94380.1|  484|Caenorhabditis elegans Hypothetical p...   141   5e-34
Z70306-6|CAA94326.1|  484|Caenorhabditis elegans Hypothetical pr...   141   5e-34
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a...    28   6.0  
U58758-1|AAB93429.2|  819|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z70311-11|CAA94380.1|  484|Caenorhabditis elegans Hypothetical
           protein T25B9.9 protein.
          Length = 484

 Score =  141 bits (341), Expect = 5e-34
 Identities = 63/100 (63%), Positives = 78/100 (78%)
 Frame = -1

Query: 701 FTKNPQLTXLLXDPFFSERISSAQSSLRTVVAQAALVGVPAPALSAALAFYDGYRSGVLP 522
           F KN QL+ LL D FF++ I+ AQ S R VV  A  +G+P PA S+ALAFYDGY S V+P
Sbjct: 381 FQKNKQLSNLLLDDFFTKAITEAQDSWRVVVCAAVRLGIPVPAFSSALAFYDGYTSEVVP 440

Query: 521 ANLLQAQRDYFGAHTYELLHNPGQFIHTNWTGHGGKISAS 402
           ANLLQAQRDYFGAHTYELL  PG ++HTNWTG GG+++++
Sbjct: 441 ANLLQAQRDYFGAHTYELLAKPGTWVHTNWTGTGGRVTSN 480


>Z70306-6|CAA94326.1|  484|Caenorhabditis elegans Hypothetical
           protein T25B9.9 protein.
          Length = 484

 Score =  141 bits (341), Expect = 5e-34
 Identities = 63/100 (63%), Positives = 78/100 (78%)
 Frame = -1

Query: 701 FTKNPQLTXLLXDPFFSERISSAQSSLRTVVAQAALVGVPAPALSAALAFYDGYRSGVLP 522
           F KN QL+ LL D FF++ I+ AQ S R VV  A  +G+P PA S+ALAFYDGY S V+P
Sbjct: 381 FQKNKQLSNLLLDDFFTKAITEAQDSWRVVVCAAVRLGIPVPAFSSALAFYDGYTSEVVP 440

Query: 521 ANLLQAQRDYFGAHTYELLHNPGQFIHTNWTGHGGKISAS 402
           ANLLQAQRDYFGAHTYELL  PG ++HTNWTG GG+++++
Sbjct: 441 ANLLQAQRDYFGAHTYELLAKPGTWVHTNWTGTGGRVTSN 480


>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 168 protein.
          Length = 1347

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 22/91 (24%), Positives = 36/91 (39%)
 Frame = -1

Query: 671 LXDPFFSERISSAQSSLRTVVAQAALVGVPAPALSAALAFYDGYRSGVLPANLLQAQRDY 492
           L DP  + ++         +V+   +   P P   AA+A Y  Y  G   A + QA  D+
Sbjct: 437 LPDPPSNVQVEGGAQPGTLLVSWIPVTNQPKPPSRAAVASYLVYADGKNIAQVPQATADH 496

Query: 491 FGAHTYELLHNPGQFIHTNWTGHGGKISAST 399
                 +L  +P  FI        G +S+ +
Sbjct: 497 VVLRLADLSDDPPVFITVRTKTKEGAVSSDS 527


>U58758-1|AAB93429.2|  819|Caenorhabditis elegans Hypothetical
           protein ZK1127.7 protein.
          Length = 819

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = -1

Query: 581 APALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLHNPGQFIHTNWTGHGGKISAS 402
           A A++   A++ G +S  L   ++   +DY G+H   LL   GQF        GGK SAS
Sbjct: 356 AGAVAEISAYHHGEQS--LMGTIVNLAQDYVGSHNINLLLPIGQF---GTRLQGGKDSAS 410


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,942,621
Number of Sequences: 27780
Number of extensions: 287188
Number of successful extensions: 643
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)