Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o10r
(740 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 25 0.75
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.0
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 23 4.0
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 22 7.0
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 22 7.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.2
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 25.0 bits (52), Expect = 0.75
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 185 TETIRSISHSSFHYFVRCVKIWSR 256
+ +R I H +Y RC + W R
Sbjct: 4 SHVVRGIEHGGLYYHQRCSRDWFR 27
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 3.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 617 TVVAQAALVGVPAPALSAALAFYDGYRSGVLPA 519
T+ +Q + +P LSAA GY+ V+P+
Sbjct: 1092 TLTSQTIRISWMSPPLSAANGVITGYKVIVIPS 1124
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 22.6 bits (46), Expect = 4.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 149 NLTKKIENN*LLTETIRSISHSSFHYFVRCVKIWSRTPKRA*SKSIK 289
+L KK LT R+ SS H VKIW + +RA +K ++
Sbjct: 23 SLEKKFREKQYLTIAERAEFSSSLHLTETQVKIWFQN-RRAKAKRLQ 68
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 97 VIGTQSIGLLLKAFVLLV 44
VIG S+GLLL A V ++
Sbjct: 137 VIGVTSLGLLLLALVAVL 154
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 97 VIGTQSIGLLLKAFVLLV 44
VIG S+GLLL A V ++
Sbjct: 108 VIGVTSLGLLLLALVAVL 125
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +3
Query: 405 CGNFPAMP-GP 434
CGNFP+ P GP
Sbjct: 129 CGNFPSRPMGP 139
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +3
Query: 405 CGNFPAMP-GP 434
CGNFP+ P GP
Sbjct: 129 CGNFPSRPMGP 139
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +3
Query: 405 CGNFPAMP-GP 434
CGNFP+ P GP
Sbjct: 129 CGNFPSRPMGP 139
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +3
Query: 405 CGNFPAMP-GP 434
CGNFP+ P GP
Sbjct: 129 CGNFPSRPMGP 139
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +3
Query: 405 CGNFPAMP-GP 434
CGNFP+ P GP
Sbjct: 129 CGNFPSRPMGP 139
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +3
Query: 405 CGNFPAMP-GP 434
CGNFP+ P GP
Sbjct: 129 CGNFPSRPMGP 139
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +3
Query: 405 CGNFPAMP-GP 434
CGNFP+ P GP
Sbjct: 129 CGNFPSRPMGP 139
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +3
Query: 405 CGNFPAMP-GP 434
CGNFP+ P GP
Sbjct: 132 CGNFPSRPMGP 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,054
Number of Sequences: 438
Number of extensions: 3849
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -