Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o09f
(623 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7ZYB6 Cluster: Sdhb-prov protein; n=7; cellular organi... 214 1e-54
UniRef50_P21914 Cluster: Succinate dehydrogenase [ubiquinone] ir... 212 7e-54
UniRef50_P21912 Cluster: Succinate dehydrogenase [ubiquinone] ir... 209 4e-53
UniRef50_Q2HEG2 Cluster: Succinate dehydrogenase, ubiquinone, ir... 196 4e-49
UniRef50_Q9FJP9 Cluster: Succinate dehydrogenase [ubiquinone] ir... 189 5e-47
UniRef50_UPI00015B507A Cluster: PREDICTED: similar to succinate ... 175 7e-43
UniRef50_Q9ZEA1 Cluster: Succinate dehydrogenase iron-sulfur sub... 174 2e-42
UniRef50_Q5DM51 Cluster: Hydrogenosomal succinate dehydrogenase ... 145 7e-34
UniRef50_A0DM52 Cluster: Chromosome undetermined scaffold_56, wh... 142 5e-33
UniRef50_UPI0000DB6ECF Cluster: PREDICTED: similar to Succinate ... 140 2e-32
UniRef50_A3S6I1 Cluster: Succinate dehydrogenase, iron-sulfur pr... 138 8e-32
UniRef50_A0KVX3 Cluster: Succinate dehydrogenase and fumarate re... 131 1e-29
UniRef50_A1B6G1 Cluster: Succinate dehydrogenase; n=1; Paracoccu... 122 5e-27
UniRef50_Q8DFP8 Cluster: Succinate dehydrogenase; n=39; Gammapro... 113 4e-24
UniRef50_Q9G8R9 Cluster: Succinate:cytochrome c oxidoreductase s... 113 4e-24
UniRef50_P51053 Cluster: Succinate dehydrogenase iron-sulfur sub... 105 9e-22
UniRef50_Q57YX5 Cluster: Electron transfer protein, putative; n=... 102 8e-21
UniRef50_Q67L21 Cluster: Succinate dehydrogenase iron-sulfur pro... 101 1e-20
UniRef50_Q4EAU8 Cluster: Succinate dehydrogenase, iron-sulfur pr... 100 3e-20
UniRef50_Q1PUX3 Cluster: Similar to succinate dehydrogenase/fuma... 96 7e-19
UniRef50_A7D294 Cluster: Succinate dehydrogenase and fumarate re... 95 1e-18
UniRef50_Q5V347 Cluster: Succinate dehydrogenase iron-sulfur pro... 95 2e-18
UniRef50_Q3ACD2 Cluster: Fumarate reductase, iron-sulfur subunit... 93 6e-18
UniRef50_A6Q2U4 Cluster: Succinate dehydrogenase/fumarate reduct... 93 6e-18
UniRef50_Q9YDG7 Cluster: Succinate dehydrogenase subunit B; n=2;... 87 3e-16
UniRef50_Q3VV73 Cluster: Succinate dehydrogenase/fumarate reduct... 87 4e-16
UniRef50_Q97AQ2 Cluster: Succinate dehydrogenase iron sulfur sub... 87 4e-16
UniRef50_Q10761 Cluster: Fumarate reductase iron-sulfur subunit;... 87 4e-16
UniRef50_A0LK34 Cluster: Succinate dehydrogenase and fumarate re... 83 5e-15
UniRef50_A0LEM3 Cluster: Succinate dehydrogenase and fumarate re... 83 5e-15
UniRef50_Q8ZYL9 Cluster: Succinate dehydrogenase iron-sulfur sub... 83 7e-15
UniRef50_O29575 Cluster: Succinate dehydrogenase, iron-sulfur su... 83 7e-15
UniRef50_Q8KAW0 Cluster: Succinate/fumarate oxidoreductase, iron... 82 9e-15
UniRef50_Q39YX0 Cluster: Succinate dehydrogenase/fumarate reduct... 82 9e-15
UniRef50_P44893 Cluster: Fumarate reductase iron-sulfur subunit;... 81 2e-14
UniRef50_Q2JIV5 Cluster: Succinate dehydrogenase/fumarate reduct... 80 5e-14
UniRef50_A1RZ94 Cluster: Succinate dehydrogenase and fumarate re... 80 5e-14
UniRef50_UPI00015BB01D Cluster: succinate dehydrogenase subunit ... 79 1e-13
UniRef50_A0L4R2 Cluster: Succinate dehydrogenase and fumarate re... 79 1e-13
UniRef50_A0RY99 Cluster: Succinate dehydrogenase/fumarate reduct... 79 1e-13
UniRef50_A7BWP3 Cluster: Succinate dehydrogenase/fumarate reduct... 78 1e-13
UniRef50_A6FPW4 Cluster: Succinate dehydrogenase and fumarate re... 77 5e-13
UniRef50_Q0RXW4 Cluster: Succinate dehydrogenase Fe-S protein su... 74 2e-12
UniRef50_A6Q9J7 Cluster: Succinate dehydrogenase/fumarate reduct... 74 2e-12
UniRef50_Q9C4L8 Cluster: Succinate dehydrogenase complex subunit... 73 4e-12
UniRef50_Q9RVS1 Cluster: Succinate dehydrogenase, iron-sulfur su... 72 1e-11
UniRef50_Q8ZUN7 Cluster: Iron-sulfur protein, putative; n=1; Pyr... 72 1e-11
UniRef50_Q3AFZ8 Cluster: Fumarate reductase, iron-sulfur subunit... 71 3e-11
UniRef50_Q28K79 Cluster: Succinate dehydrogenase and fumarate re... 71 3e-11
UniRef50_P17596 Cluster: Fumarate reductase iron-sulfur subunit;... 70 4e-11
UniRef50_O66828 Cluster: Fumarate reductase iron-sulfur subunit;... 70 5e-11
UniRef50_A3MVZ2 Cluster: Ferredoxin; n=3; Thermoproteaceae|Rep: ... 68 2e-10
UniRef50_A1VAY9 Cluster: Succinate dehydrogenase and fumarate re... 67 3e-10
UniRef50_Q0LGY5 Cluster: Succinate dehydrogenase and fumarate re... 67 4e-10
UniRef50_A1WKV3 Cluster: Succinate dehydrogenase and fumarate re... 66 6e-10
UniRef50_A7I4E8 Cluster: Succinate dehydrogenase and fumarate re... 65 1e-09
UniRef50_A3CS04 Cluster: Succinate dehydrogenase and fumarate re... 64 3e-09
UniRef50_O66892 Cluster: Fumarate reductase iron-sulfur subunit;... 62 8e-09
UniRef50_A6Q0W9 Cluster: Succinate dehydrogenase/fumarate reduct... 61 2e-08
UniRef50_Q9PJE9 Cluster: Succinate dehydrogenase, iron-sulfur pr... 59 7e-08
UniRef50_Q57557 Cluster: Uncharacterized iron-sulfur protein MJ0... 59 7e-08
UniRef50_O06914 Cluster: Fumarate reductase iron-sulfur subunit;... 59 1e-07
UniRef50_Q7M826 Cluster: SUCCINATE DEHYDROGENASE IRON-SULFUR PRO... 58 1e-07
UniRef50_P08066 Cluster: Succinate dehydrogenase iron-sulfur sub... 58 2e-07
UniRef50_O53142 Cluster: Thiol:fumarate reductase subunit B prot... 58 2e-07
UniRef50_Q6LYC4 Cluster: Uncharacterized iron-sulfur protein MMP... 58 2e-07
UniRef50_Q8G5R5 Cluster: Probable iron sulfur protein associated... 57 3e-07
UniRef50_A0UA59 Cluster: Putative uncharacterized protein; n=2; ... 57 4e-07
UniRef50_Q2NSQ3 Cluster: Putative fumarate reductase iron-sulfur... 56 5e-07
UniRef50_A6Q6K2 Cluster: Succinate dehydrogenase/fumarate reduct... 54 3e-06
UniRef50_Q8TZ09 Cluster: Succinate dehydrogenase/fumarate reduct... 54 3e-06
UniRef50_A4XBA1 Cluster: Succinate dehydrogenase and fumarate re... 53 6e-06
UniRef50_A0UN31 Cluster: Putative uncharacterized protein; n=1; ... 52 8e-06
UniRef50_Q4EAU7 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A3S6I0 Cluster: Succinate dehydrogenase; n=1; Prochloro... 51 2e-05
UniRef50_UPI0000382637 Cluster: COG0479: Succinate dehydrogenase... 50 3e-05
UniRef50_A1SML2 Cluster: Succinate dehydrogenase and fumarate re... 49 1e-04
UniRef50_A5EEU0 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_A1HQB5 Cluster: Ferredoxin precursor; n=1; Thermosinus ... 43 0.005
UniRef50_A5N696 Cluster: Predicted succinate dehydrogenase iron-... 42 0.012
UniRef50_Q673T2 Cluster: Putative uncharacterized protein; n=2; ... 42 0.012
UniRef50_A6DAI5 Cluster: Fumarate reductase, iron-sulfur subunit... 41 0.028
UniRef50_A3ZM86 Cluster: Succinate dehydrogenase; n=2; Planctomy... 40 0.048
UniRef50_Q07JP7 Cluster: Putative anti-sigma regulatory factor, ... 38 0.15
UniRef50_Q12ZL3 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding;... 38 0.20
UniRef50_Q9RYS3 Cluster: Oxidoreductase, iron-sulfur subunit; n=... 37 0.34
UniRef50_Q6AMH0 Cluster: Probable aldehyde oxidoreductase; n=1; ... 37 0.45
UniRef50_Q3JIQ1 Cluster: Putative uncharacterized protein; n=4; ... 37 0.45
UniRef50_A0YGY3 Cluster: Putative aldehyde dehydrogenase subunit... 37 0.45
UniRef50_A3PE01 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_Q89PX8 Cluster: Blr3352 protein; n=9; Proteobacteria|Re... 35 1.4
UniRef50_Q08XR4 Cluster: 4-hydroxybenzoyl-CoA reductase gamma su... 35 1.4
UniRef50_Q8NTD5 Cluster: Succinate dehydrogenase/fumarate reduct... 34 2.4
UniRef50_Q3M1C7 Cluster: Ferredoxin precursor; n=28; Bacteria|Re... 34 2.4
UniRef50_Q2JES1 Cluster: (2Fe-2S)-binding; n=2; Actinobacteria (... 34 2.4
UniRef50_Q2TZI5 Cluster: Protein involved in mRNA turnover and s... 34 2.4
UniRef50_Q82LE2 Cluster: Putative oxidoreductase; n=2; Streptomy... 34 3.2
UniRef50_Q0RCP1 Cluster: Putative Nicotine dehydrogenase; n=1; F... 34 3.2
UniRef50_A5V4I5 Cluster: (2Fe-2S)-binding domain protein; n=1; S... 34 3.2
UniRef50_A5FC66 Cluster: (2Fe-2S)-binding domain protein; n=3; B... 34 3.2
UniRef50_Q8DIM5 Cluster: Tsl1557 protein; n=2; Cyanobacteria|Rep... 33 4.2
UniRef50_Q07LN5 Cluster: (2Fe-2S)-binding domain protein; n=1; R... 33 4.2
UniRef50_A4E9L9 Cluster: Putative uncharacterized protein; n=2; ... 33 4.2
UniRef50_UPI0000E4A215 Cluster: PREDICTED: similar to very low d... 33 5.6
UniRef50_UPI000065FBD2 Cluster: Jumonji, AT rich interactive dom... 33 5.6
UniRef50_Q11KU2 Cluster: Twin-arginine translocation pathway sig... 33 5.6
UniRef50_A4IWL1 Cluster: Ribonuclease R; n=11; Francisella tular... 33 5.6
UniRef50_Q89PE7 Cluster: Oxidoreductase with iron-sulfur subunit... 33 7.3
UniRef50_Q6AR04 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_P72223 Cluster: Quinoline 2-oxidoreductase; n=2; Bacter... 33 7.3
UniRef50_A4FJB4 Cluster: Ferredoxin:(2Fe-2S)-binding; n=2; Actin... 33 7.3
UniRef50_A4F963 Cluster: (2Fe-2S)-binding protein; n=1; Saccharo... 33 7.3
UniRef50_A3XMT6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_A3F4U2 Cluster: Myosin VIb; n=1; Taenia asiatica|Rep: M... 33 7.3
UniRef50_Q6NRD3 Cluster: Posh protein; n=4; Tetrapoda|Rep: Posh ... 32 9.7
UniRef50_A7HDK9 Cluster: Succinate dehydrogenase and fumarate re... 32 9.7
UniRef50_A6TWS3 Cluster: (2Fe-2S)-binding domain protein; n=1; A... 32 9.7
UniRef50_A3VYX6 Cluster: Probable oxidoreductase; n=1; Roseovari... 32 9.7
UniRef50_A0QQT7 Cluster: Twin-arginine translocation pathway sig... 32 9.7
UniRef50_A7QHL6 Cluster: Chromosome chr5 scaffold_98, whole geno... 32 9.7
UniRef50_Q9VZT7 Cluster: CG12734-PA, isoform A; n=4; Diptera|Rep... 32 9.7
UniRef50_Q0CFF3 Cluster: Predicted protein; n=2; Aspergillus|Rep... 32 9.7
>UniRef50_Q7ZYB6 Cluster: Sdhb-prov protein; n=7; cellular
organisms|Rep: Sdhb-prov protein - Xenopus laevis
(African clawed frog)
Length = 282
Score = 214 bits (523), Expect = 1e-54
Identities = 98/149 (65%), Positives = 119/149 (79%), Gaps = 3/149 (2%)
Frame = +3
Query: 186 PLLRLTTG---TFGQLRTFATSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAP 356
P+LRL+ + G A ++ A R+K FA+YRW+PD+P KP Q +EVDL+ C P
Sbjct: 13 PVLRLSGALQVSRGAQTAAAPASQAAARIKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGP 72
Query: 357 MVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPL 536
MVLDAL+KIKNEVDPTLTFRRSCREG+CGSCAMNI+G NTLAC ID N+SK +KIYPL
Sbjct: 73 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPL 132
Query: 537 PHMYVVKDLVPDLTNFYRQYQSIEPWLQR 623
PHMYVVKDLVPDL+NFY QY+SIEP+L++
Sbjct: 133 PHMYVVKDLVPDLSNFYAQYKSIEPYLKK 161
>UniRef50_P21914 Cluster: Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial precursor; n=71;
cellular organisms|Rep: Succinate dehydrogenase
[ubiquinone] iron-sulfur subunit, mitochondrial
precursor - Drosophila melanogaster (Fruit fly)
Length = 297
Score = 212 bits (517), Expect = 7e-54
Identities = 89/122 (72%), Positives = 104/122 (85%)
Frame = +3
Query: 258 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 437
++K F +YRWNPD +KPY Q +EVDL +C PMVLDAL+KIKNE+DPTLTFRRSCREG+
Sbjct: 45 QIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGI 104
Query: 438 CGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
CGSCAMNI G NTLACIS ID N SK K+YPLPHMYVV+DLVPD+ NFY QY++I+PWL
Sbjct: 105 CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWL 164
Query: 618 QR 623
QR
Sbjct: 165 QR 166
>UniRef50_P21912 Cluster: Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial precursor; n=276;
cellular organisms|Rep: Succinate dehydrogenase
[ubiquinone] iron-sulfur subunit, mitochondrial
precursor - Homo sapiens (Human)
Length = 280
Score = 209 bits (511), Expect = 4e-53
Identities = 90/129 (69%), Positives = 111/129 (86%)
Frame = +3
Query: 237 TSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFR 416
T+A+ A R+K FA+YRW+PD+ KP+ Q +EVDL+ C PMVLDAL+KIKNEVD TLTFR
Sbjct: 31 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFR 90
Query: 417 RSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQY 596
RSCREG+CGSCAMNI+G NTLAC ID N++K +KIYPLPHMYV+KDLVPDL+NFY QY
Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150
Query: 597 QSIEPWLQR 623
+SIEP+L++
Sbjct: 151 KSIEPYLKK 159
>UniRef50_Q2HEG2 Cluster: Succinate dehydrogenase, ubiquinone,
iron-sulfur protein, mitochondrial; n=1; Chaetomium
globosum|Rep: Succinate dehydrogenase, ubiquinone,
iron-sulfur protein, mitochondrial - Chaetomium globosum
(Soil fungus)
Length = 246
Score = 196 bits (478), Expect = 4e-49
Identities = 88/136 (64%), Positives = 108/136 (79%)
Frame = +3
Query: 216 GQLRTFATSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEV 395
GQ ++ + S AK +KTF +YRWNPD P +KP Q++ +DL+ PMVLDAL++IKNE+
Sbjct: 39 GQQQSQSASGDAAK-LKTFQIYRWNPDTPTEKPKMQSYTLDLNKTGPMVLDALIRIKNEL 97
Query: 396 DPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDL 575
DPTLTFRRSCREG+CGSCAMNI+G NTLAC+ I S KIYPLPH YVVKDLVPDL
Sbjct: 98 DPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPAEDSAELKIYPLPHTYVVKDLVPDL 157
Query: 576 TNFYRQYQSIEPWLQR 623
T FY+QY+SI+P+LQR
Sbjct: 158 TQFYKQYKSIKPYLQR 173
>UniRef50_Q9FJP9 Cluster: Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit 3, mitochondrial precursor; n=5;
Magnoliophyta|Rep: Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit 3, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 309
Score = 189 bits (460), Expect = 5e-47
Identities = 80/119 (67%), Positives = 98/119 (82%)
Frame = +3
Query: 264 KTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCG 443
K F +YRWNPD+P+ KP+ Q+F VDL C PMVLD L KIK E D +L++RRSCREG+CG
Sbjct: 67 KEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICG 126
Query: 444 SCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQ 620
SC+MNIDG NT+AC+ I+ N SKPT I PLPHMYV+KDLV DLTNFY+QY+S+EPWL+
Sbjct: 127 SCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLK 185
>UniRef50_UPI00015B507A Cluster: PREDICTED: similar to succinate
dehydrogenase iron-protein subunit; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to succinate
dehydrogenase iron-protein subunit - Nasonia vitripennis
Length = 538
Score = 175 bits (426), Expect = 7e-43
Identities = 74/143 (51%), Positives = 103/143 (72%)
Frame = +3
Query: 195 RLTTGTFGQLRTFATSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDAL 374
++ G + A SA+ +K +YRWNP++P KPY Q FEVDL+ C MVLD L
Sbjct: 255 QMIAGPMNPQQVDAASATNTPFIKIVKIYRWNPEKPTTKPYLQKFEVDLNKCGSMVLDIL 314
Query: 375 LKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVV 554
IK E+DPTL+FRRSCREG+CGSC+MNI+G+NTLACI+ + ++ K IYPLPH Y +
Sbjct: 315 HYIKAELDPTLSFRRSCREGICGSCSMNINGINTLACITKVTRDQEKSLLIYPLPHTYTI 374
Query: 555 KDLVPDLTNFYRQYQSIEPWLQR 623
+DL+PD+++F QY+ I+P+L+R
Sbjct: 375 RDLIPDMSHFLEQYKKIDPYLKR 397
>UniRef50_Q9ZEA1 Cluster: Succinate dehydrogenase iron-sulfur
subunit; n=121; cellular organisms|Rep: Succinate
dehydrogenase iron-sulfur subunit - Rickettsia
prowazekii
Length = 261
Score = 174 bits (423), Expect = 2e-42
Identities = 80/115 (69%), Positives = 95/115 (82%)
Frame = +3
Query: 276 VYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAM 455
VYR++PD D+ P +FE+DL PMVLDAL+KIKNE+D TLTFRRSCREG+CGSCAM
Sbjct: 32 VYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAM 90
Query: 456 NIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQ 620
NIDG NTLACI I ++IS KIYPLPHM VVKDLVPD+++FY QY+SIEPWL+
Sbjct: 91 NIDGTNTLACIKPI-EDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLK 144
>UniRef50_Q5DM51 Cluster: Hydrogenosomal succinate dehydrogenase
beta subunit; n=3; Spirotrichea|Rep: Hydrogenosomal
succinate dehydrogenase beta subunit - Nyctotherus
ovalis
Length = 320
Score = 145 bits (352), Expect = 7e-34
Identities = 65/123 (52%), Positives = 92/123 (74%)
Frame = +3
Query: 255 KRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREG 434
+ +K F V+R++P P+ ++ +DLD+C PM LDAL+KIK+E+D TLTFRRSCREG
Sbjct: 71 EHMKRFDVFRYDPMSSADPPHFVSYYIDLDECGPMFLDALIKIKDEIDSTLTFRRSCREG 130
Query: 435 VCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPW 614
+CGSC+MNIDG + LACI+ I +N + + I PL M V++DLV D++NFY QY+ I+P
Sbjct: 131 ICGSCSMNIDGRHNLACIAAIPKNNLEKSFIAPLTSMNVLRDLVVDMSNFYNQYKVIQPH 190
Query: 615 LQR 623
L+R
Sbjct: 191 LKR 193
>UniRef50_A0DM52 Cluster: Chromosome undetermined scaffold_56, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_56, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 305
Score = 142 bits (345), Expect = 5e-33
Identities = 63/122 (51%), Positives = 91/122 (74%)
Frame = +3
Query: 258 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 437
++K F +YR++P + + P ++ VDL PM LDALL IK+ D +L+ RRSCREG+
Sbjct: 61 KMKQFLIYRYDPADENDFPKYVSYYVDLKKIPPMYLDALLYIKDNYDSSLSLRRSCREGI 120
Query: 438 CGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
CGSC+MN +G++ LACI ID ++++P I PL HM+VVKDLV D+TNFY QY++I+P+L
Sbjct: 121 CGSCSMNCNGLHKLACIHAIDTDLTQPAYITPLGHMFVVKDLVVDMTNFYTQYKTIDPYL 180
Query: 618 QR 623
+R
Sbjct: 181 KR 182
>UniRef50_UPI0000DB6ECF Cluster: PREDICTED: similar to Succinate
dehydrogenase B CG3283-PA; n=2; Apis mellifera|Rep:
PREDICTED: similar to Succinate dehydrogenase B
CG3283-PA - Apis mellifera
Length = 337
Score = 140 bits (339), Expect = 2e-32
Identities = 66/123 (53%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Frame = +3
Query: 258 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCA-PMVLDALLKIKNEVDPTLTFRRSCREG 434
R++T VYRWNP++P+ KPY Q F VDL+ C M LD L IK E DPTL++R+SCR G
Sbjct: 78 RLQTIRVYRWNPEKPNVKPYMQQFSVDLNKCTGTMGLDVLALIKAEYDPTLSYRKSCRGG 137
Query: 435 VCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPW 614
+CG CA+NI+GV I + SKP IYPLPH YV++DLV DL + +QY++IEP+
Sbjct: 138 MCGCCAVNINGV-----ILGLPLESSKPIVIYPLPHSYVIRDLVTDLEQYLKQYKNIEPF 192
Query: 615 LQR 623
L+R
Sbjct: 193 LKR 195
>UniRef50_A3S6I1 Cluster: Succinate dehydrogenase, iron-sulfur
protein; n=2; Bacteria|Rep: Succinate dehydrogenase,
iron-sulfur protein - Prochlorococcus marinus str. MIT
9211
Length = 170
Score = 138 bits (335), Expect = 8e-32
Identities = 64/123 (52%), Positives = 82/123 (66%)
Frame = +3
Query: 252 AKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCRE 431
A ++ F +YR++P+E P + VD+D M+LD L IKN +DPTL FRRSCRE
Sbjct: 24 ATNLRQFKIYRYSPEEGGN-PRWDVYWVDMDKAGTMILDVLFYIKNTIDPTLAFRRSCRE 82
Query: 432 GVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEP 611
GVCGSCAMNI G NT+AC D+ I PLPH VVKDL+PDLTNFY Q+ ++P
Sbjct: 83 GVCGSCAMNIAGQNTIACTKGFDELPGGVISIAPLPHQPVVKDLIPDLTNFYAQHAYVQP 142
Query: 612 WLQ 620
+L+
Sbjct: 143 YLK 145
>UniRef50_A0KVX3 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=15; cellular
organisms|Rep: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein - Shewanella sp. (strain
ANA-3)
Length = 235
Score = 131 bits (317), Expect = 1e-29
Identities = 67/117 (57%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Frame = +3
Query: 270 FAVYRWNPDEPDKKPYTQNFEVDLDDCAPM-VLDALLKIKNEVDPTLTFRRSCREGVCGS 446
FAVYR+NPD D KPY Q++ +++ + + M VLDAL+K+K E DPTL FRRSCREGVCGS
Sbjct: 5 FAVYRYNPDV-DTKPYMQDYSLEVAEGSDMMVLDALIKLK-EQDPTLAFRRSCREGVCGS 62
Query: 447 CAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
+N++G N LACI+ I K +I PLP M VV+DLV DLT FY+QY+ I+P+L
Sbjct: 63 DGVNMNGKNGLACITPISTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPFL 119
>UniRef50_A1B6G1 Cluster: Succinate dehydrogenase; n=1; Paracoccus
denitrificans PD1222|Rep: Succinate dehydrogenase -
Paracoccus denitrificans (strain Pd 1222)
Length = 122
Score = 122 bits (295), Expect = 5e-27
Identities = 57/97 (58%), Positives = 68/97 (70%)
Frame = +3
Query: 327 FEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQN 506
F DLDDC P+ LDAL+ IKN +DPTLTFRRSCREGVCGSCAM ID N AC I
Sbjct: 9 FRDDLDDCGPIPLDALIWIKNRIDPTLTFRRSCREGVCGSCAMTIDATNWTACTWAIADR 68
Query: 507 ISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
+KP I+ L ++ +K+LVPD T+ QY+ IEPWL
Sbjct: 69 -AKPATIFLLANLPAIKELVPDQTHLLAQYEMIEPWL 104
>UniRef50_Q8DFP8 Cluster: Succinate dehydrogenase; n=39;
Gammaproteobacteria|Rep: Succinate dehydrogenase -
Vibrio vulnificus
Length = 236
Score = 113 bits (271), Expect = 4e-24
Identities = 55/117 (47%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
Frame = +3
Query: 270 FAVYRWNPDEPDKKPYTQNFEVDLDDCAPM-VLDALLKIKNEVDPTLTFRRSCREGVCGS 446
F+VYR+NPD D KPY +++ ++++D + M VLDAL+ +K E D T++FRRSCREGVCGS
Sbjct: 5 FSVYRYNPDV-DTKPYMKDYVLEVEDGSDMMVLDALILLK-EQDATISFRRSCREGVCGS 62
Query: 447 CAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
+N++G N LACI+ + + I PLP + V++DL+ D+T FY Y ++P+L
Sbjct: 63 DGLNMNGKNGLACITPLSALKADKIVIRPLPGLPVIRDLIVDMTQFYDNYAKVKPFL 119
>UniRef50_Q9G8R9 Cluster: Succinate:cytochrome c oxidoreductase
subunit 2; n=1; Naegleria gruberi|Rep:
Succinate:cytochrome c oxidoreductase subunit 2 -
Naegleria gruberi
Length = 270
Score = 113 bits (271), Expect = 4e-24
Identities = 53/119 (44%), Positives = 84/119 (70%), Gaps = 3/119 (2%)
Frame = +3
Query: 270 FAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSC 449
+ V+R++P + +P+ Q + + + + M+LD L +KNE D +L++RRSCREG+CGSC
Sbjct: 16 YKVFRYDPFI-NSEPWVQLYFISNEAHSSMLLDNLFYLKNEKDESLSYRRSCREGICGSC 74
Query: 450 AMNIDGVNTLACISHIDQN---ISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
AMNI+G N LAC+ + ++ ++ +I+PLPHM VVKDL+ + +FY QY+SI P+L
Sbjct: 75 AMNINGENALACLYIMKEHLNVLNNEVRIFPLPHMPVVKDLIVCMKHFYLQYKSINPFL 133
>UniRef50_P51053 Cluster: Succinate dehydrogenase iron-sulfur
subunit; n=32; Proteobacteria|Rep: Succinate
dehydrogenase iron-sulfur subunit - Coxiella burnetii
Length = 235
Score = 105 bits (252), Expect = 9e-22
Identities = 49/117 (41%), Positives = 75/117 (64%)
Frame = +3
Query: 267 TFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGS 446
TF++ R+NP E DKKPY Q+FE+D+ +L L+ E P + RRSC EGVCGS
Sbjct: 2 TFSIMRFNP-ETDKKPYMQDFELDVSAIQGKMLLNALEALREKHPDIGLRRSCAEGVCGS 60
Query: 447 CAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
MNI+G N LAC++ + +++ + PLP +++DL+ D+ FY QY+ ++P+L
Sbjct: 61 DGMNINGKNALACVTQL-KDLPDRVVVRPLPGFPIIRDLIVDMEQFYAQYKKVKPYL 116
>UniRef50_Q57YX5 Cluster: Electron transfer protein, putative; n=5;
Trypanosomatidae|Rep: Electron transfer protein,
putative - Trypanosoma brucei
Length = 242
Score = 102 bits (244), Expect = 8e-21
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Frame = +3
Query: 189 LLRLTTGTFG-QLRTFATSASLAKRVKTFA-VYRWNPDEPDKKPYTQNFEVDLDDCAPMV 362
+LR T + +R A S + A K + R++P+ K +++E D MV
Sbjct: 1 MLRKVTSPYKVSIRRTAASVTAADSKKAILRLIRFDPET--NKQRVESYEYDKHHDY-MV 57
Query: 363 LDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPH 542
LD + +K DPTL FR SC EGVCGSCAMNI+GVN+LACI+ Q T + PLP+
Sbjct: 58 LDLITAVKAHQDPTLAFRASCCEGVCGSCAMNINGVNSLACITFSQQ----VTTVGPLPN 113
Query: 543 MYVVKDLVPDLTNFYRQYQSIEPWLQ 620
V+KD V DL +F+RQY I P+++
Sbjct: 114 FPVIKDFVVDLRHFFRQYAYIRPFVR 139
>UniRef50_Q67L21 Cluster: Succinate dehydrogenase iron-sulfur
protein; n=1; Symbiobacterium thermophilum|Rep:
Succinate dehydrogenase iron-sulfur protein -
Symbiobacterium thermophilum
Length = 243
Score = 101 bits (243), Expect = 1e-20
Identities = 51/115 (44%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Frame = +3
Query: 276 VYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAM 455
V+R++P++ +K+ Y F V+ D VL+ALL + + DP+L FR SCRE +CGSCAM
Sbjct: 12 VFRYDPEKDEKQHY-DTFTVEYRD-GMTVLEALLWVFEKKDPSLAFRYSCREAICGSCAM 69
Query: 456 NIDGVNTLACISHIDQNISKPT-KIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
I G LAC + + T + PLPHM V+KDLV D T F+ Y ++PWL
Sbjct: 70 YISGRYALACRVQVKDALEGDTVTVSPLPHMRVIKDLVVDQTKFWENYARVKPWL 124
>UniRef50_Q4EAU8 Cluster: Succinate dehydrogenase, iron-sulfur
protein; n=1; Wolbachia endosymbiont of Drosophila
ananassae|Rep: Succinate dehydrogenase, iron-sulfur
protein - Wolbachia endosymbiont of Drosophila ananassae
Length = 104
Score = 100 bits (239), Expect = 3e-20
Identities = 41/67 (61%), Positives = 53/67 (79%)
Frame = +3
Query: 252 AKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCRE 431
AK ++ F +YRW+ D+ +K P F +D+D C PMVLDAL+KIK+E+D TLTFRRSCRE
Sbjct: 25 AKNIRRFQIYRWSADD-EKNPRIDTFFIDMDSCGPMVLDALIKIKDEIDSTLTFRRSCRE 83
Query: 432 GVCGSCA 452
G+CGSCA
Sbjct: 84 GICGSCA 90
>UniRef50_Q1PUX3 Cluster: Similar to succinate
dehydrogenase/fumarate reductase (Chain B) of E.coli;
n=1; Candidatus Kuenenia stuttgartiensis|Rep: Similar to
succinate dehydrogenase/fumarate reductase (Chain B) of
E.coli - Candidatus Kuenenia stuttgartiensis
Length = 240
Score = 95.9 bits (228), Expect = 7e-19
Identities = 48/117 (41%), Positives = 71/117 (60%)
Frame = +3
Query: 267 TFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGS 446
+F ++R+NP DK+ Y Q +E+ VL+ L+ I+ D +L FR SCR VCGS
Sbjct: 7 SFNIFRFNPAS-DKEAYFQKYEIPFTRKDLTVLEGLVYIQQHRDDSLAFRSSCRAAVCGS 65
Query: 447 CAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
CAM+I+G LAC + I + +K I PL HM + KDL D+ F+ +Y+ I+P+L
Sbjct: 66 CAMHINGKYRLACNTLISKLNTKTVTIRPLAHMAIQKDLFVDMKPFWEKYEQIKPYL 122
>UniRef50_A7D294 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Succinate dehydrogenase
and fumarate reductase iron-sulfur protein - Halorubrum
lacusprofundi ATCC 49239
Length = 296
Score = 95.1 bits (226), Expect = 1e-18
Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Frame = +3
Query: 234 ATSASLAKRVKTFAVYRWNPD-EPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLT 410
A A+ + V+R++P+ E ++P F V VLDAL+ ++ D +LT
Sbjct: 48 AEKAAADEETVELKVFRYDPEIEGKQEPRFDTFHVPFTK-GMTVLDALMYSRDTYDSSLT 106
Query: 411 FRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYR 590
FR SCR+ VCGS AM ++G LAC + I ++ +P ++ PLPH V KDLV DL +FY
Sbjct: 107 FRHSCRQAVCGSDAMFVNGGQKLACKTQI-ADLEQPIRVEPLPHAEVEKDLVVDLEHFYD 165
Query: 591 QYQSIEPWLQ 620
Q +++EP+ Q
Sbjct: 166 QMEAVEPYFQ 175
>UniRef50_Q5V347 Cluster: Succinate dehydrogenase iron-sulfur
protein subunit; n=5; Halobacteriaceae|Rep: Succinate
dehydrogenase iron-sulfur protein subunit - Haloarcula
marismortui (Halobacterium marismortui)
Length = 295
Score = 94.7 bits (225), Expect = 2e-18
Identities = 47/117 (40%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Frame = +3
Query: 267 TFAVYRWNPD-EPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCG 443
T V+R++P+ E ++P +F V +LDAL+ ++ D +LTFR SCR+ VCG
Sbjct: 58 TLKVFRYDPEVEGKQEPRFDDFRVPFHK-GMTILDALIYARDHYDSSLTFRHSCRQAVCG 116
Query: 444 SCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPW 614
S A+ ++G L C + I + + P +I PLPH VVKDLV D+ +FY Q +++EP+
Sbjct: 117 SDALFVNGRQRLGCKTQISE-LEDPVRIEPLPHQEVVKDLVVDMEHFYDQMEAVEPY 172
>UniRef50_Q3ACD2 Cluster: Fumarate reductase, iron-sulfur subunit;
n=2; cellular organisms|Rep: Fumarate reductase,
iron-sulfur subunit - Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008)
Length = 263
Score = 92.7 bits (220), Expect = 6e-18
Identities = 46/116 (39%), Positives = 73/116 (62%)
Frame = +3
Query: 270 FAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSC 449
F ++R++P + D +PY Q++ D+ + VLD L IK +D TL FR SCR G+CGSC
Sbjct: 5 FKIWRYDPAK-DVQPYFQDYTFDVKE-GMTVLDCLYYIKENIDATLAFRASCRMGICGSC 62
Query: 450 AMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
AM I+ LAC + + +I PLP+ +KDLVPDLT + ++++++P++
Sbjct: 63 AMYINKKPRLACETQALSLGTDVIEIAPLPNYKNIKDLVPDLTPLFEKHKNVKPYV 118
>UniRef50_A6Q2U4 Cluster: Succinate dehydrogenase/fumarate
reductase, iron-sulfur protein; n=3;
Epsilonproteobacteria|Rep: Succinate
dehydrogenase/fumarate reductase, iron-sulfur protein -
Nitratiruptor sp. (strain SB155-2)
Length = 318
Score = 92.7 bits (220), Expect = 6e-18
Identities = 47/121 (38%), Positives = 75/121 (61%), Gaps = 3/121 (2%)
Frame = +3
Query: 267 TFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGS 446
TF V+R+N E D P+ E+D+ + +VLD L +IK E D + ++RRSCR G+CGS
Sbjct: 4 TFKVFRFNA-ETDYLPHYDTIEMDVKE-DEVVLDILNRIKWEHDGSFSYRRSCRHGICGS 61
Query: 447 CAMNIDGVNTLACISHIDQNI---SKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
CA+ ++G +TLAC + I I P+ VKD+V D +F+++Y++++PWL
Sbjct: 62 CAVKVNGRSTLACKERMVDMIELFGNELTIEPVSKKRAVKDMVVDKADFWKKYETVKPWL 121
Query: 618 Q 620
+
Sbjct: 122 E 122
>UniRef50_Q9YDG7 Cluster: Succinate dehydrogenase subunit B; n=2;
Desulfurococcales|Rep: Succinate dehydrogenase subunit B
- Aeropyrum pernix
Length = 305
Score = 87.0 bits (206), Expect = 3e-16
Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Frame = +3
Query: 255 KRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREG 434
KRV+ F + +++P+ + + Q EV+ VLDALLKIK E D +LT R SCR
Sbjct: 15 KRVR-FVIRKYDPESG--RSWWQEHEVETYR-GMTVLDALLKIKEEQDHSLTLRYSCRMA 70
Query: 435 VCGSCAMNIDGVNTLAC---ISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSI 605
VCGSC M I+G LAC ++ + + + ++ PL + VVKDL+ D T F+ +++ +
Sbjct: 71 VCGSCGMTINGTPRLACQTQVAQVAREDAPVVRVEPLYNFKVVKDLLTDFTEFFEKHRRV 130
Query: 606 EPWLQR 623
+P+L R
Sbjct: 131 KPYLIR 136
>UniRef50_Q3VV73 Cluster: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein; n=3; Bacteroidetes/Chlorobi
group|Rep: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein - Prosthecochloris aestuarii DSM 271
Length = 292
Score = 86.6 bits (205), Expect = 4e-16
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Frame = +3
Query: 231 FATSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAP--MVLDALLKIKNEVDPT 404
F+ L T + R+NP + D +PY + ++V+ AP +LD L++I+++ D T
Sbjct: 53 FSNKYDLVFMTYTIRILRYNP-QSDTEPYYREYQVE---AAPHERILDVLVRIQSDHDST 108
Query: 405 LTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNF 584
L R+SC GVCGS AM I+G N LAC + + ++ PLP V +DLV D F
Sbjct: 109 LALRKSCGHGVCGSDAMLINGENRLACSTLVRDIKGTLIRVEPLPGAPVKRDLVLDTDRF 168
Query: 585 YRQYQSIEPWL 617
+ +YQ++ P+L
Sbjct: 169 WDKYQAVMPYL 179
>UniRef50_Q97AQ2 Cluster: Succinate dehydrogenase iron sulfur
subunit; n=4; Archaea|Rep: Succinate dehydrogenase iron
sulfur subunit - Thermoplasma volcanium
Length = 240
Score = 86.6 bits (205), Expect = 4e-16
Identities = 43/105 (40%), Positives = 63/105 (60%)
Frame = +3
Query: 309 KPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACI 488
K Y Q + V D + VL+ LL IK +D TL+FR SCR +CGSC M I G +AC
Sbjct: 17 KTYFQKYNVPKDKVST-VLEGLLYIKENLDQTLSFRYSCRMEICGSCGMEIQGKPRMACS 75
Query: 489 SHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQR 623
+ I+ S +I PL H V++DLV D+ F+ +Y+ ++P++ R
Sbjct: 76 TIIEDLKSDKIRIEPLKHYKVIRDLVVDIDPFFDKYKEVKPYVIR 120
>UniRef50_Q10761 Cluster: Fumarate reductase iron-sulfur subunit;
n=19; Bacteria|Rep: Fumarate reductase iron-sulfur
subunit - Mycobacterium tuberculosis
Length = 247
Score = 86.6 bits (205), Expect = 4e-16
Identities = 46/116 (39%), Positives = 69/116 (59%)
Frame = +3
Query: 276 VYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAM 455
V R+ P E + P Q +EV L VLD L IK+ +D TL+FR SCR G+CGS M
Sbjct: 9 VSRYRP-EIESAPTFQAYEVPLTR-EWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
Query: 456 NIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQR 623
I+G LAC + + + P ++ P+ + V++DLV D+++F + S++PWL R
Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVR 122
>UniRef50_A0LK34 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: Succinate dehydrogenase and
fumarate reductase iron-sulfur protein - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 237
Score = 83.0 bits (196), Expect = 5e-15
Identities = 46/116 (39%), Positives = 68/116 (58%)
Frame = +3
Query: 270 FAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSC 449
F ++R++P E D++PY +N+ V + + +LD L +IK E D TL +R SC GVCGS
Sbjct: 5 FKIFRFDP-ETDEEPYYRNYTV-VAEPQERILDCLNRIKWEQDGTLAYRMSCGHGVCGSD 62
Query: 450 AMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
M I+GV LAC + + + PLP V+KDLV D+ +F + I P+L
Sbjct: 63 GMRINGVCGLACQKLVREYEGLEVVLEPLPFFKVLKDLVVDMEHFLDGIRLIRPYL 118
>UniRef50_A0LEM3 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=2; Bacteria|Rep:
Succinate dehydrogenase and fumarate reductase
iron-sulfur protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 220
Score = 83.0 bits (196), Expect = 5e-15
Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Frame = +3
Query: 276 VYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAM 455
+ R++P D P Q F V ++ VLDALL + D L+FRRSCR +CGSCA+
Sbjct: 7 ISRFDPGM-DTAPRFQRFVVGVEP-NQTVLDALLCAWRQ-DIGLSFRRSCRSAICGSCAV 63
Query: 456 NIDGVNTLACISHIDQNIS--KPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
I+G LAC + +++ ++ +P I PLPH ++KDLV DL F+ +++ PWL
Sbjct: 64 RINGRPALACQTLMEKAVAEGEPVTIEPLPHFKLLKDLVVDLEPFFESLKAVVPWL 119
>UniRef50_Q8ZYL9 Cluster: Succinate dehydrogenase iron-sulfur
subunit; n=4; Thermoproteaceae|Rep: Succinate
dehydrogenase iron-sulfur subunit - Pyrobaculum
aerophilum
Length = 237
Score = 82.6 bits (195), Expect = 7e-15
Identities = 42/106 (39%), Positives = 64/106 (60%)
Frame = +3
Query: 306 KKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLAC 485
KK + Q ++V++ VLD LLKIK E DPTL R SCR +CGSC M I+GV LAC
Sbjct: 14 KKSWWQEYKVEVPSKRISVLDVLLKIKEEQDPTLAVRYSCRMAICGSCGMVINGVPRLAC 73
Query: 486 ISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQR 623
+ + + + P+ + V+KDLV DL + + ++++P++ R
Sbjct: 74 QTLLSELGDGRLVVEPMWNHRVIKDLVVDLEPDFEKVKAVKPYIIR 119
>UniRef50_O29575 Cluster: Succinate dehydrogenase, iron-sulfur
subunit B; n=1; Archaeoglobus fulgidus|Rep: Succinate
dehydrogenase, iron-sulfur subunit B - Archaeoglobus
fulgidus
Length = 236
Score = 82.6 bits (195), Expect = 7e-15
Identities = 41/105 (39%), Positives = 63/105 (60%)
Frame = +3
Query: 309 KPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACI 488
K Y Q+FEV VL+AL IK +D +L FR SCR G+CGSCAM I+ LAC
Sbjct: 13 KAYWQSFEVPAKR-GMTVLEALYYIKENLDSSLAFRASCRMGICGSCAMKINDKPRLACE 71
Query: 489 SHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQR 623
+ + + K+ PL + V+KDL+ + F+ ++++++P+L R
Sbjct: 72 TQV-LTLGNAVKVEPLDNFKVIKDLITEFDGFFAKHKAVKPYLIR 115
>UniRef50_Q8KAW0 Cluster: Succinate/fumarate oxidoreductase,
iron-sulfur protein, putative; n=10; Chlorobiaceae|Rep:
Succinate/fumarate oxidoreductase, iron-sulfur protein,
putative - Chlorobium tepidum
Length = 345
Score = 82.2 bits (194), Expect = 9e-15
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Frame = +3
Query: 267 TFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGS 446
TF V+R+NP + D KPY ++ + L+ VL AL IK VD TLTFR C+ G+CGS
Sbjct: 16 TFRVHRFNP-QVDSKPYFDDYTIKLEK-GITVLRALNYIKEHVDSTLTFRAFCQAGICGS 73
Query: 447 CAMNIDGVNTLACISHIDQNISKP-----TKIYPLPHMYVVKDLVPDLTNFYRQYQSIEP 611
CAM I+ ++ LAC + + + K KI PL ++ +KDLV ++ + +
Sbjct: 74 CAMRINNMSKLACTTQVWDELEKAREPGVIKIEPLRNLPHIKDLVVEMDPVVGKMKKYSN 133
Query: 612 WL 617
W+
Sbjct: 134 WV 135
>UniRef50_Q39YX0 Cluster: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein; n=1; Geobacter metallireducens
GS-15|Rep: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein - Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210)
Length = 344
Score = 82.2 bits (194), Expect = 9e-15
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Frame = +3
Query: 249 LAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCR 428
+ +R +F +YR+NP + D+ P+ NF + ++ +L AL IK ++P LTFR C+
Sbjct: 1 MERREVSFRIYRYNP-QVDRTPFYDNFRIAVEK-GITILRALNHIKEHLEPRLTFRAFCQ 58
Query: 429 EGVCGSCAMNIDGVNTLACISHIDQNISKPTK----IYPLPHMYVVKDLVPDLTNFYRQY 596
G+CGSCA+ I+GV+ LAC + + + + I PL ++ V++DLV D+ +
Sbjct: 59 AGICGSCAVRINGVSKLACTTQVWDELGGDGEHTILIEPLNNLEVIRDLVVDIDPIMDKL 118
Query: 597 QSIEPWLQ 620
+ W++
Sbjct: 119 KENYSWVK 126
>UniRef50_P44893 Cluster: Fumarate reductase iron-sulfur subunit;
n=113; Proteobacteria|Rep: Fumarate reductase
iron-sulfur subunit - Haemophilus influenzae
Length = 256
Score = 81.4 bits (192), Expect = 2e-14
Identities = 42/119 (35%), Positives = 75/119 (63%)
Frame = +3
Query: 261 VKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVC 440
V V R+NP E D++P+ ++V D+ + LDAL IK++++P+L++R SCR +C
Sbjct: 6 VMNVEVLRYNP-EIDQEPHLSTYQVPYDNQTSL-LDALGYIKDKLEPSLSYRWSCRMAIC 63
Query: 441 GSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
GSC M ++ LAC + + ++ S +I PL + + +DLV DL++F ++I+P++
Sbjct: 64 GSCGMMVNNKPKLACKTFL-RDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYI 121
>UniRef50_Q2JIV5 Cluster: Succinate dehydrogenase/fumarate
reductase, iron-sulfur protein; n=14; Cyanobacteria|Rep:
Succinate dehydrogenase/fumarate reductase, iron-sulfur
protein - Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 343
Score = 79.8 bits (188), Expect = 5e-14
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Frame = +3
Query: 270 FAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSC 449
F ++R P EP P Q+F ++ A +LD L +IK E D +L FR++CR +CGSC
Sbjct: 5 FQIFRQLPPEP---PRWQSFWLETSPGAT-ILDCLNQIKWEQDGSLAFRKNCRNTICGSC 60
Query: 450 AMNIDGVNTLACISHIDQNIS------KPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEP 611
AM I+G LAC H+ + + +P +I PL ++ V++DLV D+ F+ ++P
Sbjct: 61 AMRINGRAALACGRHVGEELDPRSPQPQPIRIGPLGNLPVLRDLVVDMQPFWNDLSRVDP 120
Query: 612 WL 617
++
Sbjct: 121 FV 122
>UniRef50_A1RZ94 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Thermofilum pendens
Hrk 5|Rep: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein - Thermofilum pendens
(strain Hrk 5)
Length = 219
Score = 79.8 bits (188), Expect = 5e-14
Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 327 FEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQN 506
+EVD+D VLDAL K+ E DPTLTF +C GVCG+C M I+GV LAC++ I +
Sbjct: 22 YEVDVDPDTS-VLDALEKVSLEQDPTLTFEHACHHGVCGACGMVINGVERLACVTRIGEV 80
Query: 507 I-SKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEP 611
+ PL VV DL D + + QY +EP
Sbjct: 81 ARGGVVVVEPLRGFRVVSDLAVDKSRMFSQYALVEP 116
>UniRef50_UPI00015BB01D Cluster: succinate dehydrogenase subunit B;
n=1; Ignicoccus hospitalis KIN4/I|Rep: succinate
dehydrogenase subunit B - Ignicoccus hospitalis KIN4/I
Length = 319
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/119 (35%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Frame = +3
Query: 270 FAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSC 449
F V R++P K + Q +EV++D + + AL +++ E DPTL +R C+ GVCG+C
Sbjct: 6 FKVARYDP--ATKASWWQEYEVEVDKYTSVAV-ALQRVREEKDPTLAYRPLCKMGVCGNC 62
Query: 450 AMNIDGVNTLACISHIDQNISK---PTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
A+ I+G LAC+++ + + + PL +M VV+DL+ D ++F R+ S++P+L
Sbjct: 63 AVKINGRPALACLTNALEAAEEGNGTIVVEPLDNMPVVRDLIVDRSDFERRMFSVKPYL 121
>UniRef50_A0L4R2 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Magnetococcus sp.
MC-1|Rep: Succinate dehydrogenase and fumarate reductase
iron-sulfur protein - Magnetococcus sp. (strain MC-1)
Length = 328
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Frame = +3
Query: 327 FEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQN 506
F+V P VL+ L +K D +LTFR+SCR +CGSCAM I G LAC + I +
Sbjct: 28 FQVKATPLTP-VLNLLEDVKGNQDGSLTFRQSCRSAICGSCAMRIGGKTRLACKTQIGEV 86
Query: 507 I--SKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQ 620
+ + +I P + V+KDLV D+T F+ + I+P+LQ
Sbjct: 87 VDENNTVQIAPQQNSPVLKDLVVDITKFFNKVHQIKPYLQ 126
>UniRef50_A0RY99 Cluster: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein; n=2; Thermoprotei|Rep: Succinate
dehydrogenase/fumarate reductase iron-sulfur protein -
Cenarchaeum symbiosum
Length = 258
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/117 (30%), Positives = 67/117 (57%)
Frame = +3
Query: 267 TFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGS 446
T + + NP +K+ Y +FEV ++ VLDA+L +K +D ++ R SCR+ CGS
Sbjct: 22 TLRIAKSNPGAGEKREYA-SFEVPVEKWTT-VLDAILDVKKHLDHSVAVRYSCRQATCGS 79
Query: 447 CAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
C M I+G+ LAC + +D+ S + P+ + V++DL + + ++ ++P++
Sbjct: 80 CGMMINGMPKLACFTKVDELQSAVVTVEPMVNFPVIRDLAVSFGSMFESHRKVKPYI 136
>UniRef50_A7BWP3 Cluster: Succinate dehydrogenase/fumarate reductase
iron-sulfur protein; n=1; Beggiatoa sp. PS|Rep:
Succinate dehydrogenase/fumarate reductase iron-sulfur
protein - Beggiatoa sp. PS
Length = 341
Score = 78.2 bits (184), Expect = 1e-13
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Frame = +3
Query: 255 KRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREG 434
K + + R+ PD+ D+ PY NF+++++ +L+AL IKN D TLTFR CR
Sbjct: 11 KILANIRIQRYTPDK-DRSPYFDNFKMEVET-GMTILEALRHIKNTQDSTLTFRAFCRSA 68
Query: 435 VCGSCAMNIDGVNTLACISHIDQNI----SKPTKIYPLPHMYVVKDLVPDLTNFYRQYQS 602
+CGSC + ++G LAC + + + K I P+ ++ +++DLV D+ +
Sbjct: 69 ICGSCTVRVNGNPVLACSTQLMPILKDFGKKSVTIAPMANLPIIRDLVVDIDPVIDKLAK 128
Query: 603 IEPWL 617
+ P+L
Sbjct: 129 MHPYL 133
>UniRef50_A6FPW4 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Roseobacter sp.
AzwK-3b|Rep: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein - Roseobacter sp. AzwK-3b
Length = 244
Score = 76.6 bits (180), Expect = 5e-13
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Frame = +3
Query: 318 TQNFEV-DLDDC-APMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACIS 491
T FE D+ C + VLD + I+ + DPTLT+R +CR G+CGSCAM ++G+ C +
Sbjct: 19 TGEFETFDVPSCESQTVLDVVSWIQQQADPTLTYRFACRVGMCGSCAMMVNGIPRWTCRT 78
Query: 492 HIDQNI-SKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIE 608
H+ + + I PL +M V+KDLV D+ F+ ++ S E
Sbjct: 79 HVKKVCENNSLSIEPLRNMPVIKDLVADMDPFFDKWVSAE 118
>UniRef50_Q0RXW4 Cluster: Succinate dehydrogenase Fe-S protein
subunit; n=1; Rhodococcus sp. RHA1|Rep: Succinate
dehydrogenase Fe-S protein subunit - Rhodococcus sp.
(strain RHA1)
Length = 234
Score = 74.1 bits (174), Expect = 2e-12
Identities = 38/104 (36%), Positives = 62/104 (59%)
Frame = +3
Query: 306 KKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLAC 485
+K +F+VD A VLD LL I+ E+D ++ FR SCR +CG+C + +DG + LAC
Sbjct: 18 EKDALTSFQVDRFP-AMTVLDVLLTIQRELDASIGFRFSCRVAMCGTCTLRVDGRSVLAC 76
Query: 486 ISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
S + + K +I P+ VV+DL+ D F+ Q++ + P++
Sbjct: 77 QSIVPE-AKKSIEIAPMAGFPVVRDLIVDTEPFWEQWKRVTPYM 119
>UniRef50_A6Q9J7 Cluster: Succinate dehydrogenase/fumarate
reductase, iron-sulfur protein; n=1; Sulfurovum sp.
NBC37-1|Rep: Succinate dehydrogenase/fumarate reductase,
iron-sulfur protein - Sulfurovum sp. (strain NBC37-1)
Length = 329
Score = 74.1 bits (174), Expect = 2e-12
Identities = 39/123 (31%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Frame = +3
Query: 258 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 437
R T +R+N E D PY + +E+++ ++LD L +IK E D + ++RRSCR G+
Sbjct: 5 RKVTIKAFRFNA-ETDYLPYYKEYEMEVGK-DELILDLLNRIKWEHDGSFSYRRSCRHGI 62
Query: 438 CGSCAMNIDGVNTLACISHIDQNI---SKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIE 608
CG+CA+ ++G TLAC + + + + P VVKD++ D +F+ ++ +++
Sbjct: 63 CGACAIKVNGRATLACKQNAIELLDLFNNELVFEPSSKKRVVKDMIIDKKDFWDKHAAVQ 122
Query: 609 PWL 617
P++
Sbjct: 123 PYV 125
>UniRef50_Q9C4L8 Cluster: Succinate dehydrogenase complex subunit B;
n=9; Archaea|Rep: Succinate dehydrogenase complex
subunit B - Sulfolobus tokodaii
Length = 320
Score = 73.3 bits (172), Expect = 4e-12
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Frame = +3
Query: 300 PDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTL 479
P+K + Q +++ +D +AL +IK+E DPTL +R SC VCGSC M I+G L
Sbjct: 19 PEKGYWWQEYKLKVDRFTQFT-EALRRIKSEQDPTLAYRASCHMAVCGSCGMKINGEPRL 77
Query: 480 AC----ISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
AC I + S I P+ + VKDL+ DL FY++ ++P L
Sbjct: 78 ACKTLVIDMAKKYGSNVITIEPMDYFKPVKDLIVDLDEFYQRMYKVKPRL 127
>UniRef50_Q9RVS1 Cluster: Succinate dehydrogenase, iron-sulfur
subunit; n=39; Bacteria|Rep: Succinate dehydrogenase,
iron-sulfur subunit - Deinococcus radiodurans
Length = 264
Score = 71.7 bits (168), Expect = 1e-11
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Frame = +3
Query: 276 VYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAM 455
V R+NP++ DKK ++++ ++D L +IK +P+LTFRRSC+ G+CGS AM
Sbjct: 35 VLRFNPEQ-DKKGRWVTYDIEAQP-GDRLVDVLNEIKWYHEPSLTFRRSCQHGICGSDAM 92
Query: 456 NIDGVNTLAC---ISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPW 614
I+G N LAC + + + + P+ + V +DL+ D+ F+ Y++I P+
Sbjct: 93 MINGRNRLACKTLVRDLVKGSGGEITVEPIRGLKVERDLLVDMEPFFDAYRAIMPY 148
>UniRef50_Q8ZUN7 Cluster: Iron-sulfur protein, putative; n=1;
Pyrobaculum aerophilum|Rep: Iron-sulfur protein,
putative - Pyrobaculum aerophilum
Length = 154
Score = 71.7 bits (168), Expect = 1e-11
Identities = 35/91 (38%), Positives = 54/91 (59%)
Frame = +3
Query: 300 PDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTL 479
P Y Q + VD+ D VLD L+K+K ++D TL FR +CR G+CG+C + I+G L
Sbjct: 65 PGGVSYVQEYHVDVGDGKITVLDLLIKVKEDLDGTLVFRYACRMGLCGACTVKINGKPRL 124
Query: 480 ACISHIDQNISKPTKIYPLPHMYVVKDLVPD 572
AC++ + ++ + P+ V+KDLV D
Sbjct: 125 ACMTMV-ADLGSEITVEPITEK-VIKDLVVD 153
>UniRef50_Q3AFZ8 Cluster: Fumarate reductase, iron-sulfur subunit;
n=2; Clostridiales|Rep: Fumarate reductase, iron-sulfur
subunit - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 317
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = +3
Query: 360 VLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISK----PTKI 527
+L AL IK +DPTLTF SCR VCG+CA+ ++G LAC + +D+ + + I
Sbjct: 31 ILWALSYIKESIDPTLTFTASCRHAVCGACAVRVNGQAVLACETLLDKMLDRWETDTLLI 90
Query: 528 YPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
PL + V++DLV D + ++PWL
Sbjct: 91 EPLQNFKVIRDLVVDWETKVERLARVKPWL 120
>UniRef50_Q28K79 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=2;
Rhodobacteraceae|Rep: Succinate dehydrogenase and
fumarate reductase iron-sulfur protein - Jannaschia sp.
(strain CCS1)
Length = 237
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +3
Query: 327 FEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQN 506
FEV D + VLD + ++ DPTL++R +CR G+CGSCAM ++GV C +HI++
Sbjct: 20 FEVPAYD-SQTVLDVVSWVQQNADPTLSYRFACRVGMCGSCAMMVNGVPRWTCRTHINKV 78
Query: 507 I-SKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIE 608
+ I PL ++ V+KDL D+ F+ ++ + E
Sbjct: 79 LDGNAVTIGPLRNLPVIKDLAVDMDAFFDKWVAAE 113
>UniRef50_P17596 Cluster: Fumarate reductase iron-sulfur subunit;
n=16; Bacteria|Rep: Fumarate reductase iron-sulfur
subunit - Wolinella succinogenes
Length = 239
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Frame = +3
Query: 258 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLK-IKNEVDPTLTFRRSCREG 434
R+ T V++++P KP+ Q ++++ + M + +L I+ DP L F CR G
Sbjct: 3 RMLTIRVFKYDPQSAVSKPHFQEYKIE--EAPSMTIFIVLNMIRETYDPDLNFDFVCRAG 60
Query: 435 VCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYR-QYQSIEP 611
+CGSC M I+G +LAC + + PLP ++KDL D N++ Q +E
Sbjct: 61 ICGSCGMMINGRPSLACRTLTKDFEDGVITLLPLPAFKLIKDLSVDTGNWFNGMSQRVES 120
Query: 612 WL 617
W+
Sbjct: 121 WI 122
>UniRef50_O66828 Cluster: Fumarate reductase iron-sulfur subunit;
n=1; Aquifex aeolicus|Rep: Fumarate reductase
iron-sulfur subunit - Aquifex aeolicus
Length = 230
Score = 69.7 bits (163), Expect = 5e-11
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Frame = +3
Query: 276 VYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAM 455
V+R+NP+ ++K FEV ++ L A KIK E+DP+ +FR CR G+CG+C +
Sbjct: 10 VFRYNPETGERK--YDYFEVPYEE-GMTFLRAFQKIKEEIDPSFSFRAFCRAGICGTCTV 66
Query: 456 NIDGVNTLACISH-IDQNISKP-TKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQ 620
IDG LAC + +S+ + PL V++DLV D + + W++
Sbjct: 67 FIDGFPKLACKEQTLPYVLSEQIVTVEPLDKFEVIRDLVVDNEEVINRMKKFRTWIK 123
>UniRef50_A3MVZ2 Cluster: Ferredoxin; n=3; Thermoproteaceae|Rep:
Ferredoxin - Pyrobaculum calidifontis (strain JCM 11548
/ VA1)
Length = 104
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/90 (38%), Positives = 52/90 (57%)
Frame = +3
Query: 303 DKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLA 482
D Y Q + VD D A M LD L+ I+ ++D +L+FR +CR GVCG+CA+ I+G LA
Sbjct: 12 DGVSYDQVYHVDADPRATM-LDVLINIREDLDGSLSFRYACRMGVCGACAVKINGKPALA 70
Query: 483 CISHIDQNISKPTKIYPLPHMYVVKDLVPD 572
C + + I P+ ++KDL+ D
Sbjct: 71 CTVKLMDLGTTNIYIEPISDKNIIKDLIVD 100
>UniRef50_A1VAY9 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=2; Desulfovibrio
vulgaris subsp. vulgaris|Rep: Succinate dehydrogenase
and fumarate reductase iron-sulfur protein -
Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Length = 239
Score = 67.3 bits (157), Expect = 3e-10
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Frame = +3
Query: 267 TFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGS 446
TF V+R P + T FEV + A VLDAL I+ ++DPTL +R SC CG+
Sbjct: 7 TFKVFRCAPGGEASRFDT--FEVAVPGHAS-VLDALDAIRVDIDPTLVYRHSCHHSSCGT 63
Query: 447 CAMNIDGVNTLACI--SH---IDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEP 611
CAM I+G + LACI +H + ++ + PL + + DL+ D+ FYR + E
Sbjct: 64 CAMRINGRDRLACITPAHEAAAESSVQGTVTLEPLRGLPLQGDLMVDMRAFYRHFD--EH 121
Query: 612 W 614
W
Sbjct: 122 W 122
>UniRef50_Q0LGY5 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Succinate dehydrogenase and
fumarate reductase iron-sulfur protein - Herpetosiphon
aurantiacus ATCC 23779
Length = 250
Score = 66.9 bits (156), Expect = 4e-10
Identities = 42/117 (35%), Positives = 64/117 (54%)
Frame = +3
Query: 267 TFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGS 446
TF V R++ Y Q + V+++ +LDAL IK+E D +LTFRR + G+ GS
Sbjct: 4 TFRVPRFDAATDFTAKY-QVYHVEVNQFTT-ILDALNIIKDEQDSSLTFRRGSQSGIDGS 61
Query: 447 CAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
C M I+G N LA + + S + PLP V++DLV D +F+ + + P+L
Sbjct: 62 CGMMINGRNRLASTTRVLSLNSTEIAVGPLPGFPVIRDLVVDFDSFFAKDAVMLPYL 118
>UniRef50_A1WKV3 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=6; Proteobacteria|Rep:
Succinate dehydrogenase and fumarate reductase
iron-sulfur protein - Verminephrobacter eiseniae (strain
EF01-2)
Length = 251
Score = 66.1 bits (154), Expect = 6e-10
Identities = 30/82 (36%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +3
Query: 360 VLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIY--P 533
+LD + +I+ ++PTL++R +CR GVCGSCAM ++G C +H+ + + + +I P
Sbjct: 45 ILDVVTEIQRTLEPTLSYRFACRVGVCGSCAMTVNGRPRWTCRTHV-RRVEEDGQIVIEP 103
Query: 534 LPHMYVVKDLVPDLTNFYRQYQ 599
L +M +KDLV D++ F+ +++
Sbjct: 104 LRNMPRIKDLVVDMSGFFDKWK 125
>UniRef50_A7I4E8 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Succinate dehydrogenase
and fumarate reductase iron-sulfur protein -
Methanoregula boonei (strain 6A8)
Length = 489
Score = 64.9 bits (151), Expect = 1e-09
Identities = 38/100 (38%), Positives = 59/100 (59%)
Frame = +3
Query: 276 VYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAM 455
+ R++P + D P+ + + V++ + A VL L I +E+DPTL++R C G CGSCA+
Sbjct: 8 ILRFDPKK-DPAPHAETYAVNVSEGA-RVLHVLHAIHDEIDPTLSYRYCCGSGQCGSCAV 65
Query: 456 NIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDL 575
++G LAC+ I+ I PL ++ V KDLV DL
Sbjct: 66 RVNGEPVLACMKEATDGIT----IAPL-NLPVKKDLVVDL 100
>UniRef50_A3CS04 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=3;
Methanomicrobiales|Rep: Succinate dehydrogenase and
fumarate reductase iron-sulfur protein - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 487
Score = 63.7 bits (148), Expect = 3e-09
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +3
Query: 267 TFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGS 446
T V R++P D +P+ + + V +++ A VL AL +++E DPTL +R C G CGS
Sbjct: 5 TLRVSRFDP-AADAEPHFEEYIVQVNEGA-RVLHALHAVRDEHDPTLAYRYCCGSGQCGS 62
Query: 447 CAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDL 575
CA+ +DG LAC+ ++ + PL + V+KDL+ DL
Sbjct: 63 CAVQVDGKPVLACMEEARDGMT----VEPLA-LPVLKDLMVDL 100
>UniRef50_O66892 Cluster: Fumarate reductase iron-sulfur subunit;
n=2; Aquifex aeolicus|Rep: Fumarate reductase
iron-sulfur subunit - Aquifex aeolicus
Length = 230
Score = 62.5 bits (145), Expect = 8e-09
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +3
Query: 330 EVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNI 509
E ++D VL+ L IK E+DPTL+FR CR G+CG+C + ++G + LAC + + +I
Sbjct: 17 EYEVDGEGKTVLEILQNIK-EIDPTLSFRAMCRAGICGTCVVKVNGEHKLACNTRVYDDI 75
Query: 510 S-KPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQ 620
+ +P + P +KDLV + Y + + W +
Sbjct: 76 TLEPVDVAP-----PIKDLVVEHEFIYEKLKKGRVWFE 108
>UniRef50_A6Q0W9 Cluster: Succinate dehydrogenase/fumarate
reductase, iron-sulfur protein; n=2;
Epsilonproteobacteria|Rep: Succinate
dehydrogenase/fumarate reductase, iron-sulfur protein -
Nitratiruptor sp. (strain SB155-2)
Length = 234
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = +3
Query: 360 VLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLP 539
+L++L IK E D TLTF CR GVCGSCAM ++G LAC + + + + PL
Sbjct: 29 LLESLEYIKKEKDRTLTFSSMCRSGVCGSCAMRVNGKEVLAC----EYRVQEGDFVEPLQ 84
Query: 540 HMYVVKDLVPD 572
+ V++DLV D
Sbjct: 85 NSEVLRDLVVD 95
>UniRef50_Q9PJE9 Cluster: Succinate dehydrogenase, iron-sulfur
protein; n=10; Chlamydiales|Rep: Succinate
dehydrogenase, iron-sulfur protein - Chlamydia muridarum
Length = 265
Score = 59.3 bits (137), Expect = 7e-08
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Frame = +3
Query: 309 KPYTQNFEVDLDDCAPMVLDALLKI-KN-------EVDPTLTFRRSCREGVCGSCAMNID 464
K Y ++FE++L V+ AL++I KN VDP + + ++C E VCGSCAM ++
Sbjct: 16 KQYWESFELELHP-GENVISALMEIEKNPINTQGERVDPVV-WEQACLEEVCGSCAMLVN 73
Query: 465 GVNTLAC--ISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
GV AC + H + + K+ PL +V+DL+ D + ++ + I+ W+
Sbjct: 74 GVPRQACTVLIHEHMDAKREIKLAPLSKFPLVRDLIVDRSVMFKNLEEIQGWI 126
>UniRef50_Q57557 Cluster: Uncharacterized iron-sulfur protein
MJ0092; n=1; Methanocaldococcus jannaschii|Rep:
Uncharacterized iron-sulfur protein MJ0092 -
Methanococcus jannaschii
Length = 489
Score = 59.3 bits (137), Expect = 7e-08
Identities = 35/106 (33%), Positives = 57/106 (53%)
Frame = +3
Query: 306 KKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLAC 485
+K Y +++EV + VL+AL I + + FR SCR CGSCA+ I+G LAC
Sbjct: 12 EKEYLESYEVPENIT---VLEALEYINKHYEANILFRASCRNAQCGSCAVTINGEPRLAC 68
Query: 486 ISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQR 623
+ ++ + I PL V++DL+ D +Y++ I+ +L R
Sbjct: 69 ETKVEDGMI----IEPLRGFKVIRDLIVDREPYYKKLLGIKNYLIR 110
>UniRef50_O06914 Cluster: Fumarate reductase iron-sulfur subunit;
n=37; Proteobacteria|Rep: Fumarate reductase iron-sulfur
subunit - Helicobacter pylori (Campylobacter pylori)
Length = 245
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +3
Query: 255 KRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREG 434
+R V +++P KP+ + +++ + + AL I+ DP L+F CR G
Sbjct: 5 ERTIVVRVLKFDPQSAVSKPHFKEYQLKETPSMTLFI-ALNLIREHQDPDLSFDFVCRAG 63
Query: 435 VCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTN-FYRQYQSIEP 611
+CGSCAM ++G LAC + S + P+P ++KDL + + F + +E
Sbjct: 64 ICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKRVES 123
Query: 612 W 614
W
Sbjct: 124 W 124
>UniRef50_Q7M826 Cluster: SUCCINATE DEHYDROGENASE IRON-SULFUR
PROTEIN; n=11; Campylobacterales|Rep: SUCCINATE
DEHYDROGENASE IRON-SULFUR PROTEIN - Wolinella
succinogenes
Length = 319
Score = 58.4 bits (135), Expect = 1e-07
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Frame = +3
Query: 306 KKPYTQNFEVDLDDC-APMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLA 482
KK Y Q + + +D A +L LL IK D TL F SCR +CG+CA+ ++G + LA
Sbjct: 11 KKNYEQIYTLAKEDIEAKTLLGVLLLIKQTQDITLNFTASCRMAICGACAVRVNGHSYLA 70
Query: 483 CISHI-----DQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
C + + + S +I PL + V+ DLV D + I+P L
Sbjct: 71 CDTKMTELFEEYKNSDTFRISPLGNHRVISDLVVDWEPAIENLRKIKPGL 120
>UniRef50_P08066 Cluster: Succinate dehydrogenase iron-sulfur
subunit; n=48; Bacteria|Rep: Succinate dehydrogenase
iron-sulfur subunit - Bacillus subtilis
Length = 253
Score = 58.0 bits (134), Expect = 2e-07
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Frame = +3
Query: 264 KTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKI-------KNEVDPTLTFRRS 422
KT D D PY + FE+ V+ AL++I K E +T+ +
Sbjct: 5 KTIRFIITRQDTADSTPYDEEFEIPYRPNLN-VISALMEIRRNPVNVKGEKTTPVTWDMN 63
Query: 423 CREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQS 602
C E VCG+C+M I+G +C + IDQ + +P ++ P+ VV+DL D + + +
Sbjct: 64 CLEEVCGACSMVINGKPRQSCTALIDQ-LEQPIRLKPMKTFPVVRDLQVDRSRMFDSLKK 122
Query: 603 IEPWL 617
++ W+
Sbjct: 123 VKAWI 127
>UniRef50_O53142 Cluster: Thiol:fumarate reductase subunit B
protein; n=4; Methanobacteriaceae|Rep: Thiol:fumarate
reductase subunit B protein - Methanobacterium
thermoformicicum
Length = 488
Score = 57.6 bits (133), Expect = 2e-07
Identities = 36/115 (31%), Positives = 63/115 (54%)
Frame = +3
Query: 276 VYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAM 455
V R+ P D+KP+ +++++ + VLDAL I + + FR SCR G CGSCA+
Sbjct: 6 VLRFEPGV-DEKPHLESYDIPSKE-KMKVLDALQLINKMYNANIAFRSSCRAGQCGSCAV 63
Query: 456 NIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQ 620
++G LAC + ++ I P+ + V+KDL+ D + + +++ +LQ
Sbjct: 64 KMNGEVVLACRAEVEDG----AVIEPV-DLPVIKDLMVDRSEIEDKVRAMGLYLQ 113
>UniRef50_Q6LYC4 Cluster: Uncharacterized iron-sulfur protein
MMP1067; n=5; Methanococcus|Rep: Uncharacterized
iron-sulfur protein MMP1067 - Methanococcus maripaludis
Length = 494
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/88 (34%), Positives = 49/88 (55%)
Frame = +3
Query: 360 VLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLP 539
+LDAL I + FR SC+ G CGSCA+ I+ + LAC + ++ N+ I PL
Sbjct: 25 ILDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLACKTKVEDNMI----IEPLE 80
Query: 540 HMYVVKDLVPDLTNFYRQYQSIEPWLQR 623
V+ DLV D +Y++ ++ ++Q+
Sbjct: 81 GFDVISDLVVDREPYYKKIGTLRNYIQK 108
>UniRef50_Q8G5R5 Cluster: Probable iron sulfur protein associated
with succinate dehydrogenase/fumarate reductase; n=3;
Bifidobacterium|Rep: Probable iron sulfur protein
associated with succinate dehydrogenase/fumarate
reductase - Bifidobacterium longum
Length = 321
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/73 (42%), Positives = 40/73 (54%)
Frame = +3
Query: 300 PDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTL 479
P K + Q + + + VLD LL IK VDPTL FR SC G+CGS A+ I+G TL
Sbjct: 51 PRGKQWVQEYTIPARP-SDTVLDCLLTIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTL 109
Query: 480 ACISHIDQNISKP 518
C + I +P
Sbjct: 110 LCTATIRDWAKQP 122
>UniRef50_A0UA59 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 366
Score = 56.8 bits (131), Expect = 4e-07
Identities = 44/122 (36%), Positives = 64/122 (52%)
Frame = -1
Query: 617 QPRLDRLVLPVKVGQIGDQVFDDVHVR*RINLRRLGNVLIDMADAGQSVDAVDIHRTRTT 438
Q RLDR+VL +V + DQV D R R L V + + A ++V AVD+HR RT
Sbjct: 160 QVRLDRVVLVEEVRHVDDQVAHDRQARQRTQHDLLRQV-VQVRQARETVLAVDVHRVRTA 218
Query: 437 NALSARTSEGQGWVYFVLNLQQSVQYHRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNT 258
+A +AR +E Q V L L Q V+ H ++ + L R V L+ + ++D + N
Sbjct: 219 HAFTARAAERQRLVQ-CLQLDQRVEQH-AFMLDLELVRLHARRCV-LVRIVAVDFK--NA 273
Query: 257 FC 252
FC
Sbjct: 274 FC 275
>UniRef50_Q2NSQ3 Cluster: Putative fumarate reductase iron-sulfur
protein subunit; n=1; Sodalis glossinidius str.
'morsitans'|Rep: Putative fumarate reductase iron-sulfur
protein subunit - Sodalis glossinidius (strain
morsitans)
Length = 150
Score = 56.4 bits (130), Expect = 5e-07
Identities = 31/88 (35%), Positives = 49/88 (55%)
Frame = +3
Query: 255 KRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREG 434
K T + R++P E D+ P +++ V D+ + LDAL IK+ + LTFR SCR
Sbjct: 4 KHPLTVQIQRYDP-EKDRAPQWESYPVPWDEQTSL-LDALGYIKDHLAADLTFRWSCRMA 61
Query: 435 VCGSCAMNIDGVNTLACISHIDQNISKP 518
+CGSC M ++ V L C + + ++P
Sbjct: 62 ICGSCGMMVNDVPRLTCKTFLSGFPARP 89
>UniRef50_A6Q6K2 Cluster: Succinate dehydrogenase/fumarate
reductase, iron-sulfur protein; n=1; Sulfurovum sp.
NBC37-1|Rep: Succinate dehydrogenase/fumarate reductase,
iron-sulfur protein - Sulfurovum sp. (strain NBC37-1)
Length = 243
Score = 54.0 bits (124), Expect = 3e-06
Identities = 30/88 (34%), Positives = 42/88 (47%)
Frame = +3
Query: 360 VLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLP 539
+L AL+ IK D TLTF CR VCG+CA+ ++ LAC + I PL
Sbjct: 25 LLSALVYIKETQDATLTFSAGCRASVCGTCAVRVNRREELAC----SYKVKPGDVIEPLQ 80
Query: 540 HMYVVKDLVPDLTNFYRQYQSIEPWLQR 623
+ V++DL D + WLQ+
Sbjct: 81 YHSVLRDLKVDKNKAQETLKKATTWLQK 108
>UniRef50_Q8TZ09 Cluster: Succinate dehydrogenase/fumarate reductase
Fe-S protein; n=1; Methanopyrus kandleri|Rep: Succinate
dehydrogenase/fumarate reductase Fe-S protein -
Methanopyrus kandleri
Length = 492
Score = 54.0 bits (124), Expect = 3e-06
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +3
Query: 360 VLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLP 539
+LDAL IK P L F SCR CG+CA+ ++G LAC ++ + + PL
Sbjct: 32 LLDALRWIKEHEIPDLEFEFSCRNAQCGTCAVLVNGKARLACEYRLEP--GQEVTVGPLR 89
Query: 540 HMYVVKDLVPDLTNFYRQYQSIEP 611
H+ VVKDL D + + + + P
Sbjct: 90 HLPVVKDLAVDWSAVTSRLRPLSP 113
>UniRef50_A4XBA1 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=5; Actinomycetales|Rep:
Succinate dehydrogenase and fumarate reductase
iron-sulfur protein - Salinispora tropica CNB-440
Length = 366
Score = 52.8 bits (121), Expect = 6e-06
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +3
Query: 264 KTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCG 443
+ F ++R + D K Y V++ + +VLD + ++++ P L R +C+ G CG
Sbjct: 16 RQFRIWRGDETGGDLKEYL----VEVKE-GEVVLDIIHRLQSTEAPDLACRWNCKAGKCG 70
Query: 444 SCAMNIDGVNTLACISHIDQNISKPT-KIYPLPHMYVVKDLVPDLTNFYRQ 593
SC++ I+G LAC++ + T + PL +V+DLV D++ Y +
Sbjct: 71 SCSVEINGKPKLACMTRMSTFTEDETISVTPLRTFPIVRDLVTDVSFNYEK 121
>UniRef50_A0UN31 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 436
Score = 52.4 bits (120), Expect = 8e-06
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Frame = -1
Query: 617 QPRLDRLVLPVKVGQIGDQVFDDVHVR*RINLRRLGNVLIDMADAGQSVDAVDIHRTRTT 438
Q RLDR+VL K+G + DQV D R R R + + A + V AVD+HR
Sbjct: 285 QIRLDRVVLIEKIGHVDDQVAHDRQPRQRAQ-RDFARQRLHVGQACEPVRAVDVHRIGAA 343
Query: 437 NALSARTSEGQGWVYFVLNLQQSVQYHRCAVVQIHFEI--LRIRFLVGLIGVPSIDCE 270
+ +ART+ + V F L + V+ H VV +H ++ L +R V IGV +ID E
Sbjct: 344 DPFAARTAIRERLV-FALQAPEHVEQH--PVVGLHGDLVTLHVRRRVP-IGVVAIDME 397
>UniRef50_Q4EAU7 Cluster: Putative uncharacterized protein; n=1;
Wolbachia endosymbiont of Drosophila ananassae|Rep:
Putative uncharacterized protein - Wolbachia
endosymbiont of Drosophila ananassae
Length = 94
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = -2
Query: 454 IAQEPQTPSRHERLKVRVGSTSFLIFSKASNTIGAQSSKSTSKFCV*GFLSGSS 293
+AQ+P PS ERLKV+V S S IF AS+TIG Q S S + GF S S+
Sbjct: 38 VAQDPHMPSLQERLKVKVESISSFIFINASSTIGPQLSISIKNVSILGFFSSSA 91
>UniRef50_A3S6I0 Cluster: Succinate dehydrogenase; n=1;
Prochlorococcus marinus str. MIT 9211|Rep: Succinate
dehydrogenase - Prochlorococcus marinus str. MIT 9211
Length = 192
Score = 51.2 bits (117), Expect = 2e-05
Identities = 35/109 (32%), Positives = 54/109 (49%)
Frame = -1
Query: 596 VLPVKVGQIGDQVFDDVHVR*RINLRRLGNVLIDMADAGQSVDAVDIHRTRTTNALSART 417
+L V++GQ+ DQV V + L+ AG V A ++HR T+A +A
Sbjct: 1 MLGVEIGQVRDQVLHHRLVGQGRDGNHAARQLVKALGAGNRVLAGNVHRAGATHAFTAGA 60
Query: 416 SEGQGWVYFVLNLQQSVQYHRCAVVQIHFEILRIRFLVGLIGVPSIDCE 270
+EGQ V VL+++Q VQ HR +V + + R + G +ID E
Sbjct: 61 AEGQSRVDGVLDVEQHVQDHRAGLVHVDPVDIPAR-IAAFFGAVAIDLE 108
>UniRef50_UPI0000382637 Cluster: COG0479: Succinate
dehydrogenase/fumarate reductase, Fe-S protein subunit;
n=1; Magnetospirillum magnetotacticum MS-1|Rep: COG0479:
Succinate dehydrogenase/fumarate reductase, Fe-S protein
subunit - Magnetospirillum magnetotacticum MS-1
Length = 90
Score = 50.4 bits (115), Expect = 3e-05
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 267 TFAVYRWNPD-EPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCG 443
T V R++P+ E ++ Y F V VLDAL KIK E D +LTFRRSC GVCG
Sbjct: 23 TLRVRRYSPESEHGEEAYWDEFTVQAHG-TDRVLDALHKIKWEHDGSLTFRRSCAHGVCG 81
Query: 444 S 446
S
Sbjct: 82 S 82
>UniRef50_A1SML2 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=23; Bacteria|Rep:
Succinate dehydrogenase and fumarate reductase
iron-sulfur protein - Nocardioides sp. (strain BAA-499 /
JS614)
Length = 258
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/95 (25%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 324 NFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHI-D 500
+++V++ + +VLDA+ +++ L R +C+ G CGSC+ ++G L C++ + D
Sbjct: 21 DYDVEVSE-GEVVLDAIHRVQATQAGDLAVRWNCKAGKCGSCSAEVNGRPRLMCMTRLSD 79
Query: 501 QNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSI 605
+ ++ + P+ V++DLV D++ Y + + +
Sbjct: 80 FDPAETITVTPMRSFPVIRDLVTDVSFNYEKAREL 114
>UniRef50_A5EEU0 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. BTAi1|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182)
Length = 115
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 369 ALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNIS-KPTK 524
AL I+ DP L F SCR G+C CA+ IDG AC + + + +PTK
Sbjct: 42 ALAWIQRNTDPALAFLLSCRRGLCDICAVRIDGKVVTACTTPVRDGMRIEPTK 94
>UniRef50_A1HQB5 Cluster: Ferredoxin precursor; n=1; Thermosinus
carboxydivorans Nor1|Rep: Ferredoxin precursor -
Thermosinus carboxydivorans Nor1
Length = 123
Score = 43.2 bits (97), Expect = 0.005
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +3
Query: 279 YRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRS-CREGVCGSCAM 455
+R+NP D + + V+ + P+ + ALL +++DPT R S C +G CGSC +
Sbjct: 13 FRFNP-ATDAAGRLEEYTVESSE--PLSVMALLAKIHDLDPTFACRTSTCFKGKCGSCLV 69
Query: 456 NIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLT 578
++G + L C + + + + P +++D+ D T
Sbjct: 70 RVNGQDVLGCTTLV--RPGETVVVEPHSRFKLLRDVAVDFT 108
>UniRef50_A5N696 Cluster: Predicted succinate dehydrogenase
iron-sulfur protein; n=2; Clostridiales|Rep: Predicted
succinate dehydrogenase iron-sulfur protein -
Clostridium kluyveri DSM 555
Length = 233
Score = 41.9 bits (94), Expect = 0.012
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 420 SCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIY--PLPHMYVVKDLVPDLTNFYRQ 593
SC E CG+CAM I+GV LAC + + K I PL V+ DL D +
Sbjct: 59 SCLEKKCGACAMLINGVPRLACAVFLKELKCKKNTIVLEPLSKFPVISDLKVDRNILFEN 118
Query: 594 YQSIEPWLQ 620
+ + WL+
Sbjct: 119 MKRMRLWLE 127
>UniRef50_Q673T2 Cluster: Putative uncharacterized protein; n=2;
environmental samples|Rep: Putative uncharacterized
protein - uncultured marine group II euryarchaeote
DeepAnt-JyKC7
Length = 659
Score = 41.9 bits (94), Expect = 0.012
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +3
Query: 360 VLDALLKIKNEVDPTLTFRRSCRE----GVCGSCAMNIDGVNTLACISHIDQNISKPTKI 527
VL AL +IKN D TL+FR + +C + + + G L ++ I + + +I
Sbjct: 347 VLAALREIKNTHDGTLSFRDGAVDDQSTAICVNGRLILPGNVRLDSVAPIREG-TLALRI 405
Query: 528 YPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
PLP V++DLV D + R+ +S +PW+
Sbjct: 406 DPLPGFEVIRDLVVDHWSLERKRESSKPWM 435
>UniRef50_A6DAI5 Cluster: Fumarate reductase, iron-sulfur subunit;
n=1; Caminibacter mediatlanticus TB-2|Rep: Fumarate
reductase, iron-sulfur subunit - Caminibacter
mediatlanticus TB-2
Length = 236
Score = 40.7 bits (91), Expect = 0.028
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 411 FRRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIY-PLPHMYVVKDLVPDLTNFY 587
+R CR +CG+CA+ ++ LAC S + I I P+ V++DLV D +
Sbjct: 43 YRSFCRSAICGTCAVKVNDRTVLACKSKVKDLIQNDEVIVEPVDRSVVLRDLVVDHSYIE 102
Query: 588 RQYQSIEPW 614
+ + W
Sbjct: 103 KSIKDNRLW 111
>UniRef50_A3ZM86 Cluster: Succinate dehydrogenase; n=2;
Planctomycetaceae|Rep: Succinate dehydrogenase -
Blastopirellula marina DSM 3645
Length = 287
Score = 39.9 bits (89), Expect = 0.048
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 420 SCREGVCGSCAMNIDGVNTLACISHIDQNISK---PTKIYPLPHMYVVKDLVPDLTNFYR 590
+C E VCG+C M I+G +C + ID + + ++ P+ VV+DL+ D + ++
Sbjct: 73 NCLEEVCGACTMVINGKVRQSCSALIDVLLDEHGSTLELRPMTKFPVVRDLMVDRSRMFQ 132
Query: 591 QYQSIEPWL 617
+ ++ W+
Sbjct: 133 ALKKVKAWV 141
>UniRef50_Q07JP7 Cluster: Putative anti-sigma regulatory factor,
serine/threonine protein kinase precursor; n=1;
Rhodopseudomonas palustris BisA53|Rep: Putative
anti-sigma regulatory factor, serine/threonine protein
kinase precursor - Rhodopseudomonas palustris (strain
BisA53)
Length = 148
Score = 38.3 bits (85), Expect = 0.15
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -1
Query: 512 GNVLIDMADAGQSVDAVDIHRTRTTNALSARTSEGQGWVYFVLNLQQSVQYHR 354
G+ +++M+D GQ D +H + L AR G GW + V + +QYHR
Sbjct: 78 GDFVVEMSDDGQPFDPSVLHDPNLSEDLDARPVGGLGW-FLVRRMVDDLQYHR 129
>UniRef50_Q12ZL3 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding;
n=1; Methanococcoides burtonii DSM 6242|Rep: 4Fe-4S
ferredoxin, iron-sulfur binding - Methanococcoides
burtonii (strain DSM 6242)
Length = 180
Score = 37.9 bits (84), Expect = 0.20
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 525 IYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQ 620
I PLP + V++DLV D+ FY + I+PWL+
Sbjct: 46 IEPLPTLRVIRDLVVDMEPFYSLVEDIKPWLE 77
>UniRef50_Q9RYS3 Cluster: Oxidoreductase, iron-sulfur subunit; n=12;
Bacteria|Rep: Oxidoreductase, iron-sulfur subunit -
Deinococcus radiodurans
Length = 214
Score = 37.1 bits (82), Expect = 0.34
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3
Query: 321 QNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACIS 491
++ ++DLD A VLD L N ++ ++ C G CG+C + IDG L+C+S
Sbjct: 39 ESHQLDLDPRAS-VLDTLRDRLN----VMSVKKGCDHGQCGACTVLIDGKRVLSCLS 90
>UniRef50_Q6AMH0 Cluster: Probable aldehyde oxidoreductase; n=1;
Desulfotalea psychrophila|Rep: Probable aldehyde
oxidoreductase - Desulfotalea psychrophila
Length = 167
Score = 36.7 bits (81), Expect = 0.45
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 414 RRSCREGVCGSCAMNIDGVNTLACI 488
+ +C EG CG+C + IDGV LAC+
Sbjct: 44 KEACEEGACGACTILIDGVAQLACM 68
>UniRef50_Q3JIQ1 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 757
Score = 36.7 bits (81), Expect = 0.45
Identities = 27/85 (31%), Positives = 40/85 (47%)
Frame = -1
Query: 611 RLDRLVLPVKVGQIGDQVFDDVHVR*RINLRRLGNVLIDMADAGQSVDAVDIHRTRTTNA 432
R DR+VL + + DQ+ D R R + AG+ V AVD+HR +A
Sbjct: 138 RADRMVLIEEARHVDDQIAHDGQPRQRPQ-HDFARQRLHARHAGEPVAAVDVHRVGAAHA 196
Query: 431 LSARTSEGQGWVYFVLNLQQSVQYH 357
L+AR + Q V L+ + V+ H
Sbjct: 197 LAARAAIRQRLV-LRLHAAEHVEQH 220
>UniRef50_A0YGY3 Cluster: Putative aldehyde dehydrogenase subunit
III; n=2; unclassified Gammaproteobacteria
(miscellaneous)|Rep: Putative aldehyde dehydrogenase
subunit III - marine gamma proteobacterium HTCC2143
Length = 189
Score = 36.7 bits (81), Expect = 0.45
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 366 DALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHID 500
+ LL + E + R C +G+CGSC +++DG +CI+ ++
Sbjct: 48 ETLLSVLREYFGLIGTRFGCGKGLCGSCTVHVDGEPVRSCITSVN 92
>UniRef50_A3PE01 Cluster: Putative uncharacterized protein; n=1;
Prochlorococcus marinus str. MIT 9301|Rep: Putative
uncharacterized protein - Prochlorococcus marinus
(strain MIT 9301)
Length = 84
Score = 35.5 bits (78), Expect = 1.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 423 CREGVCGSCAMNIDGVNTLACISHIDQN 506
C G CG+C ++++GV ACIS I N
Sbjct: 40 CLTGSCGACEIDVNGVTVRACISEIKNN 67
>UniRef50_Q89PX8 Cluster: Blr3352 protein; n=9; Proteobacteria|Rep:
Blr3352 protein - Bradyrhizobium japonicum
Length = 399
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 381 IKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISH 494
+++++D T T C GVCG+C + +DGV +CI++
Sbjct: 27 VRDKLDLTGT-HLGCEHGVCGACTVLLDGVPARSCITY 63
>UniRef50_Q08XR4 Cluster: 4-hydroxybenzoyl-CoA reductase gamma
subunit; n=1; Stigmatella aurantiaca DW4/3-1|Rep:
4-hydroxybenzoyl-CoA reductase gamma subunit -
Stigmatella aurantiaca DW4/3-1
Length = 159
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 381 IKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACIS 491
++ E+ T T RR C +G CG+C + +DG L+C+S
Sbjct: 30 LREELRATGT-RRGCDQGSCGACMVLVDGEPRLSCLS 65
>UniRef50_Q8NTD5 Cluster: Succinate dehydrogenase/fumarate reductase
Fe-S protein; n=7; Actinomycetales|Rep: Succinate
dehydrogenase/fumarate reductase Fe-S protein -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 279
Score = 34.3 bits (75), Expect = 2.4
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Frame = +3
Query: 285 WNPDEPDKKPYTQNFEVDLDDCAPM-VLDALLKIKN----EVDPTLTFRRSCREGVCGSC 449
W P + + +VD D A M +L+ L + N E F CREG+CG+C
Sbjct: 38 WRQAGPTAEGKFETVQVD-DAVAQMSILELLDHVNNKFIEEGKEPFAFASDCREGICGTC 96
Query: 450 AMNIDG------VNTLACISH-IDQNISKPTKIYPLPHMY--VVKDLVPD 572
+ ++G N AC + KI PL V+KD+V D
Sbjct: 97 GLLVNGRPHGADQNKPACAQRLVSYKEGDTLKIEPLRSAAYPVIKDMVVD 146
>UniRef50_Q3M1C7 Cluster: Ferredoxin precursor; n=28; Bacteria|Rep:
Ferredoxin precursor - Anabaena variabilis (strain ATCC
29413 / PCC 7937)
Length = 280
Score = 34.3 bits (75), Expect = 2.4
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 318 TQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACIS 491
TQ EVD ++LDAL + + T T ++ C +G CG+C + +DG L+C++
Sbjct: 94 TQRLEVD---SRTVLLDAL---RERLGLTGT-KKGCDQGQCGACTVIVDGRRVLSCLT 144
>UniRef50_Q2JES1 Cluster: (2Fe-2S)-binding; n=2; Actinobacteria
(class)|Rep: (2Fe-2S)-binding - Frankia sp. (strain
CcI3)
Length = 200
Score = 34.3 bits (75), Expect = 2.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 291 PDEPDKKPYTQNFEVDLDDCA-PMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDG 467
PD+ PY + + L A + D+LL + +V + + +C +G CG+C++ +DG
Sbjct: 24 PDDGVVAPYHLHVDGFLHTVAGAWIGDSLLTVLRDVIGVTSVKDACEQGRCGACSVLLDG 83
Query: 468 VNTLAC 485
+C
Sbjct: 84 RLVASC 89
>UniRef50_Q2TZI5 Cluster: Protein involved in mRNA turnover and
stability; n=7; Eurotiomycetidae|Rep: Protein involved
in mRNA turnover and stability - Aspergillus oryzae
Length = 1628
Score = 34.3 bits (75), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 235 LRQHPSQNVLRPSQSIDGTPMSPTRNLIRKISKWIW 342
L Q P+ NV P+Q+ D +P RNL+ K+ W W
Sbjct: 622 LNQEPAANVPPPTQT-DHPSTAPPRNLVTKLFDWFW 656
>UniRef50_Q82LE2 Cluster: Putative oxidoreductase; n=2;
Streptomyces|Rep: Putative oxidoreductase - Streptomyces
avermitilis
Length = 196
Score = 33.9 bits (74), Expect = 3.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 414 RRSCREGVCGSCAMNIDGVNTLACI 488
+ +C +G CGSC + +DGV +C+
Sbjct: 37 KNACEQGECGSCTVRLDGVPVCSCL 61
>UniRef50_Q0RCP1 Cluster: Putative Nicotine dehydrogenase; n=1;
Frankia alni ACN14a|Rep: Putative Nicotine dehydrogenase
- Frankia alni (strain ACN14a)
Length = 204
Score = 33.9 bits (74), Expect = 3.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 414 RRSCREGVCGSCAMNIDGVNTLACISHIDQ 503
R C GVCGSC + +DG +C+ ++Q
Sbjct: 42 RPGCTAGVCGSCTVLLDGAPVSSCLLPVEQ 71
>UniRef50_A5V4I5 Cluster: (2Fe-2S)-binding domain protein; n=1;
Sphingomonas wittichii RW1|Rep: (2Fe-2S)-binding domain
protein - Sphingomonas wittichii RW1
Length = 160
Score = 33.9 bits (74), Expect = 3.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 414 RRSCREGVCGSCAMNIDGVNTLACI 488
R C EGVCGSC++ +DG + +C+
Sbjct: 41 RLGCGEGVCGSCSVLVDGRSMRSCL 65
>UniRef50_A5FC66 Cluster: (2Fe-2S)-binding domain protein; n=3;
Bacteria|Rep: (2Fe-2S)-binding domain protein -
Flavobacterium johnsoniae UW101
Length = 240
Score = 33.9 bits (74), Expect = 3.2
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 10/59 (16%)
Frame = +3
Query: 414 RRSCREGVCGSCAMNIDGVNTLAC--ISHIDQN--------ISKPTKIYPLPHMYVVKD 560
++ C G CG+C ++++G L+C ++ + QN +SK K++P+ ++ D
Sbjct: 121 KKGCDHGQCGACTVHVNGTRILSCLTLASMQQNAQVTTIEGLSKGKKLHPMQEAFIKHD 179
>UniRef50_Q8DIM5 Cluster: Tsl1557 protein; n=2; Cyanobacteria|Rep:
Tsl1557 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 86
Score = 33.5 bits (73), Expect = 4.2
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 423 CREGVCGSCAMNI-DGVNTLACISHIDQNISKPTKIYPLPHM--YVVKD 560
CR G CG+C + + DG ACIS I + P + PH+ YV +D
Sbjct: 36 CRMGSCGACTLELEDGQEIRACISTIAGD-RDPAPLEDCPHITAYVFRD 83
>UniRef50_Q07LN5 Cluster: (2Fe-2S)-binding domain protein; n=1;
Rhodopseudomonas palustris BisA53|Rep: (2Fe-2S)-binding
domain protein - Rhodopseudomonas palustris (strain
BisA53)
Length = 156
Score = 33.5 bits (73), Expect = 4.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 333 VDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACI 488
+D P + L +++ + T T + C EG CG+C +++DG +C+
Sbjct: 14 IDKSVRVPATMSVLAMLRDVIGLTGT-KYGCGEGECGACTISVDGQTVNSCL 64
>UniRef50_A4E9L9 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Collinsella aerofaciens ATCC 25986
Length = 925
Score = 33.5 bits (73), Expect = 4.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 423 CREGVCGSCAMNIDGVNTLACI 488
C EG CG+C +++DG AC+
Sbjct: 39 CSEGACGTCTIHVDGAAVKACV 60
>UniRef50_UPI0000E4A215 Cluster: PREDICTED: similar to very low
density lipoprotein receptor, partial; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
very low density lipoprotein receptor, partial -
Strongylocentrotus purpuratus
Length = 761
Score = 33.1 bits (72), Expect = 5.6
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 342 DDCAPMVLDALLKIKNEVDP-TLTFRRSCREGV-CGSCAMNIDGVNTLACI 488
DD VL+AL I N+V P T+T EGV C + +DG+N C+
Sbjct: 661 DDVLNSVLEALSTISNDVGPVTMTSDIDECEGVTCANDGTCLDGINDFTCV 711
>UniRef50_UPI000065FBD2 Cluster: Jumonji, AT rich interactive domain
1B (RBP2-like); n=1; Takifugu rubripes|Rep: Jumonji, AT
rich interactive domain 1B (RBP2-like) - Takifugu
rubripes
Length = 1309
Score = 33.1 bits (72), Expect = 5.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 477 LACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPW 614
L C+ HI S P Y L + Y + DL+P +T ++ + + W
Sbjct: 881 LVCLYHITDLCSCPVSNYTLNYRYTLDDLIPMMTAVKKRAELYDDW 926
>UniRef50_Q11KU2 Cluster: Twin-arginine translocation pathway signal
precursor; n=2; Rhizobiales|Rep: Twin-arginine
translocation pathway signal precursor - Mesorhizobium
sp. (strain BNC1)
Length = 199
Score = 33.1 bits (72), Expect = 5.6
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 414 RRSCREGVCGSCAMNIDGVNTLACIS 491
++ C G CG+C ++IDG L+C++
Sbjct: 81 KKGCDRGECGACTIHIDGRRVLSCLT 106
>UniRef50_A4IWL1 Cluster: Ribonuclease R; n=11; Francisella
tularensis|Rep: Ribonuclease R - Francisella tularensis
subsp. tularensis (strain WY96-3418)
Length = 765
Score = 33.1 bits (72), Expect = 5.6
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = -1
Query: 566 DQVFDDVHVR*RINLRRLGNVLIDMADAGQSVDAVDIHRTRT 441
D + DDV V R++LR V ID DA DAV HRT++
Sbjct: 250 DNISDDVVVGNRVDLRNQHFVTIDGEDAKDFDDAVYAHRTKS 291
>UniRef50_Q89PE7 Cluster: Oxidoreductase with iron-sulfur subunit;
n=32; cellular organisms|Rep: Oxidoreductase with
iron-sulfur subunit - Bradyrhizobium japonicum
Length = 172
Score = 32.7 bits (71), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 423 CREGVCGSCAMNIDGVNTLACIS 491
C GVCG+C + +DG+ T +C++
Sbjct: 48 CEHGVCGACTIVVDGMLTRSCLT 70
>UniRef50_Q6AR04 Cluster: Putative uncharacterized protein; n=1;
Desulfotalea psychrophila|Rep: Putative uncharacterized
protein - Desulfotalea psychrophila
Length = 95
Score = 32.7 bits (71), Expect = 7.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 369 ALLKIKNEVDPTLTFRRS--CREGVCGSCAMNIDGVNTLACISHI 497
A+ +I ++V PT S C GVC C M IDGV AC++ +
Sbjct: 35 AIGEITSKVSPTSKKPCSPHCLMGVCFECLMEIDGVQRQACMTTV 79
>UniRef50_P72223 Cluster: Quinoline 2-oxidoreductase; n=2;
Bacteria|Rep: Quinoline 2-oxidoreductase - Pseudomonas
putida
Length = 168
Score = 32.7 bits (71), Expect = 7.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 423 CREGVCGSCAMNIDGVNTLACIS 491
C +GVCGSC + IDG +C++
Sbjct: 48 CEQGVCGSCTILIDGAPMRSCLT 70
>UniRef50_A4FJB4 Cluster: Ferredoxin:(2Fe-2S)-binding; n=2;
Actinomycetales|Rep: Ferredoxin:(2Fe-2S)-binding -
Saccharopolyspora erythraea (strain NRRL 23338)
Length = 162
Score = 32.7 bits (71), Expect = 7.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 366 DALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACI 488
D LL + ++ R C EGVCG+C + DG +C+
Sbjct: 23 DLLLDVLHDEIGLPDVRYGCGEGVCGTCTVEFDGEPISSCL 63
>UniRef50_A4F963 Cluster: (2Fe-2S)-binding protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep:
(2Fe-2S)-binding protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 157
Score = 32.7 bits (71), Expect = 7.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 414 RRSCREGVCGSCAMNIDGVNTLACI 488
+ +C +G CGSC + +DGV +C+
Sbjct: 37 KNACEQGECGSCTVYMDGVPACSCL 61
>UniRef50_A3XMT6 Cluster: Putative uncharacterized protein; n=1;
Leeuwenhoekiella blandensis MED217|Rep: Putative
uncharacterized protein - Leeuwenhoekiella blandensis
MED217
Length = 241
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 261 VKTFAVYRWNPDEPDKKPYTQNFEVDLDD-CAPMVLDALLKIKNEVDPTL 407
VKTF +P+EP+++ Y+ N+ ++L D A + +++ K+ V P L
Sbjct: 114 VKTFLQLPCSPEEPEEQIYSLNYLIELSDGDAEFIRESISIFKDSVTPRL 163
>UniRef50_A3F4U2 Cluster: Myosin VIb; n=1; Taenia asiatica|Rep:
Myosin VIb - Taenia asiatica (Asian tapeworm)
Length = 227
Score = 32.7 bits (71), Expect = 7.3
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 365 GRFAED*ERSRPNPD-LQTFVPRGRLWFLCDEYRR 466
G+FAE E R NPD L V R R W +C +RR
Sbjct: 117 GKFAEFDEILRMNPDNLSKMVERARKWIVCYRWRR 151
>UniRef50_Q6NRD3 Cluster: Posh protein; n=4; Tetrapoda|Rep: Posh
protein - Xenopus laevis (African clawed frog)
Length = 826
Score = 32.3 bits (70), Expect = 9.7
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -2
Query: 466 PSIFIAQEPQTPSRHERLKVRVGSTSFLIFSKASNTIGAQSSKSTSKFCV 317
PS+FIA P P + + L++R G FL+F + + +S TSK V
Sbjct: 400 PSVFIAIYPYIPRKEDELELRKGE-MFLVFERCQDGWFKGTSMHTSKIGV 448
>UniRef50_A7HDK9 Cluster: Succinate dehydrogenase and fumarate
reductase iron-sulfur protein; n=93; Bacteria|Rep:
Succinate dehydrogenase and fumarate reductase
iron-sulfur protein - Anaeromyxobacter sp. Fw109-5
Length = 276
Score = 32.3 bits (70), Expect = 9.7
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 288 NPDEPDKKPYTQNFEVDLDDCAPMVLDAL-LKIKNEVDPTLTFRRSCREGVCGSCAMNID 464
NP +P + + EV+ +LD L ++ +E + F CREG+CG C I+
Sbjct: 12 NPRDPGRFERHELPEVNEHMSFLEMLDVLNQRLVSEGKEPVAFDSDCREGICGMCGFLIN 71
Query: 465 G 467
G
Sbjct: 72 G 72
>UniRef50_A6TWS3 Cluster: (2Fe-2S)-binding domain protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: (2Fe-2S)-binding
domain protein - Alkaliphilus metalliredigens QYMF
Length = 162
Score = 32.3 bits (70), Expect = 9.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 405 LTFRRSCREGVCGSCAMNIDGVNTLACI 488
L + C EG CG+C + +DGV AC+
Sbjct: 34 LGVKEGCGEGECGACTILMDGVTVNACM 61
>UniRef50_A3VYX6 Cluster: Probable oxidoreductase; n=1; Roseovarius
sp. 217|Rep: Probable oxidoreductase - Roseovarius sp.
217
Length = 187
Score = 32.3 bits (70), Expect = 9.7
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 321 QNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHID 500
Q VD +D P+ L I++++ T T + C CG+C ++IDG T +C ++++
Sbjct: 43 QTVMVDAEDGTPL----LWVIRDDLKLTGT-KFGCGVAACGACTVHIDGQPTRSCQTYVE 97
>UniRef50_A0QQT7 Cluster: Twin-arginine translocation pathway
signal; n=2; Bacteria|Rep: Twin-arginine translocation
pathway signal - Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155)
Length = 205
Score = 32.3 bits (70), Expect = 9.7
Identities = 8/26 (30%), Positives = 19/26 (73%)
Frame = +3
Query: 414 RRSCREGVCGSCAMNIDGVNTLACIS 491
++ C +G CG+C ++++G +AC++
Sbjct: 88 KKGCDQGACGACTIHLNGERVVACLT 113
>UniRef50_A7QHL6 Cluster: Chromosome chr5 scaffold_98, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_98, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 2544
Score = 32.3 bits (70), Expect = 9.7
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 8 YSAFKRLSFGGINRLDIIVTKQVTNANIVRLC 103
Y FK+ FG +NRL ++V +++ NI++ C
Sbjct: 2131 YRQFKQSGFGTLNRLRVVVVEKLFYRNIIKRC 2162
>UniRef50_Q9VZT7 Cluster: CG12734-PA, isoform A; n=4; Diptera|Rep:
CG12734-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1381
Score = 32.3 bits (70), Expect = 9.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 445 EPQTPSRHERLKVRVGSTSFLIFSKASNTIGAQSS 341
EPQTP + VG +FL++++ + TIG S+
Sbjct: 1304 EPQTPQKSTENNAPVGPATFLMYNRINTTIGGASN 1338
>UniRef50_Q0CFF3 Cluster: Predicted protein; n=2; Aspergillus|Rep:
Predicted protein - Aspergillus terreus (strain NIH
2624)
Length = 1168
Score = 32.3 bits (70), Expect = 9.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 522 KIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQR 623
K+ PL M+ ++ +PDL F Y+ I+ W QR
Sbjct: 714 KLNPLRDMHYLQRTIPDLATFRSAYRFIKTWAQR 747
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,087,730
Number of Sequences: 1657284
Number of extensions: 12660031
Number of successful extensions: 34630
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 33472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34576
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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