Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o09f
(623 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ403007-1|ABD77140.1| 255|Homo sapiens succinate dehydrogenase... 209 5e-54
BC007840-1|AAH07840.1| 280|Homo sapiens succinate dehydrogenase... 209 5e-54
AL049569-5|CAB96822.1| 280|Homo sapiens succinate dehydrogenase... 209 5e-54
U17248-1|AAA81167.1| 280|Homo sapiens succinate dehydrogenase i... 208 2e-53
M32246-1|AAA35708.1| 262|Homo sapiens protein ( Human succinate... 208 2e-53
D10245-1|BAA01089.1| 262|Homo sapiens succinate-ubiquinone oxid... 208 2e-53
U17886-1|AAA80581.1| 281|Homo sapiens succinate dehydrogenase i... 206 6e-53
BC126168-1|AAI26169.1| 793|Homo sapiens DnaJ (Hsp40) homolog, s... 31 3.3
BC117299-1|AAI17300.1| 793|Homo sapiens DnaJ (Hsp40) homolog, s... 31 3.3
AY358577-1|AAQ88940.1| 747|Homo sapiens disulfide isomerase pro... 31 3.3
AL832646-1|CAD89982.1| 792|Homo sapiens hypothetical protein pr... 31 3.3
AL137648-1|CAB70858.1| 464|Homo sapiens hypothetical protein pr... 31 3.3
AK074905-1|BAC11281.1| 277|Homo sapiens protein ( Homo sapiens ... 31 3.3
AK027696-1|BAB55304.1| 793|Homo sapiens protein ( Homo sapiens ... 31 3.3
AK027647-1|BAB55263.1| 793|Homo sapiens protein ( Homo sapiens ... 31 3.3
AK027450-1|BAB55121.1| 768|Homo sapiens protein ( Homo sapiens ... 31 3.3
AF490904-1|AAM09527.1| 747|Homo sapiens macrothioredoxin protein. 31 3.3
AF038503-1|AAN73271.1| 793|Homo sapiens ER-resident protein ERd... 31 3.3
AC105396-1|AAY24240.1| 464|Homo sapiens unknown protein. 31 3.3
>DQ403007-1|ABD77140.1| 255|Homo sapiens succinate dehydrogenase
complex subunit B protein.
Length = 255
Score = 209 bits (511), Expect = 5e-54
Identities = 90/129 (69%), Positives = 111/129 (86%)
Frame = +3
Query: 237 TSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFR 416
T+A+ A R+K FA+YRW+PD+ KP+ Q +EVDL+ C PMVLDAL+KIKNEVD TLTFR
Sbjct: 22 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFR 81
Query: 417 RSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQY 596
RSCREG+CGSCAMNI+G NTLAC ID N++K +KIYPLPHMYV+KDLVPDL+NFY QY
Sbjct: 82 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 141
Query: 597 QSIEPWLQR 623
+SIEP+L++
Sbjct: 142 KSIEPYLKK 150
>BC007840-1|AAH07840.1| 280|Homo sapiens succinate dehydrogenase
complex, subunit B, iron sulfur (Ip) protein.
Length = 280
Score = 209 bits (511), Expect = 5e-54
Identities = 90/129 (69%), Positives = 111/129 (86%)
Frame = +3
Query: 237 TSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFR 416
T+A+ A R+K FA+YRW+PD+ KP+ Q +EVDL+ C PMVLDAL+KIKNEVD TLTFR
Sbjct: 31 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFR 90
Query: 417 RSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQY 596
RSCREG+CGSCAMNI+G NTLAC ID N++K +KIYPLPHMYV+KDLVPDL+NFY QY
Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150
Query: 597 QSIEPWLQR 623
+SIEP+L++
Sbjct: 151 KSIEPYLKK 159
>AL049569-5|CAB96822.1| 280|Homo sapiens succinate dehydrogenase
complex, subunit B, iron sulfur (Ip) protein.
Length = 280
Score = 209 bits (511), Expect = 5e-54
Identities = 90/129 (69%), Positives = 111/129 (86%)
Frame = +3
Query: 237 TSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFR 416
T+A+ A R+K FA+YRW+PD+ KP+ Q +EVDL+ C PMVLDAL+KIKNEVD TLTFR
Sbjct: 31 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFR 90
Query: 417 RSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQY 596
RSCREG+CGSCAMNI+G NTLAC ID N++K +KIYPLPHMYV+KDLVPDL+NFY QY
Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150
Query: 597 QSIEPWLQR 623
+SIEP+L++
Sbjct: 151 KSIEPYLKK 159
>U17248-1|AAA81167.1| 280|Homo sapiens succinate dehydrogenase
iron-protein subunit protein.
Length = 280
Score = 208 bits (507), Expect = 2e-53
Identities = 89/129 (68%), Positives = 111/129 (86%)
Frame = +3
Query: 237 TSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFR 416
T+A+ A R+K FA+YRW+PD+ KP+ Q ++VDL+ C PMVLDAL+KIKNEVD TLTFR
Sbjct: 31 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYKVDLNKCGPMVLDALIKIKNEVDSTLTFR 90
Query: 417 RSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQY 596
RSCREG+CGSCAMNI+G NTLAC ID N++K +KIYPLPHMYV+KDLVPDL+NFY QY
Sbjct: 91 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 150
Query: 597 QSIEPWLQR 623
+SIEP+L++
Sbjct: 151 KSIEPYLKK 159
>M32246-1|AAA35708.1| 262|Homo sapiens protein ( Human
succinate-ubiquinone oxidoreductase iron sulfur (Ip)
subunit mRNA, 3' end. ).
Length = 262
Score = 208 bits (507), Expect = 2e-53
Identities = 89/129 (68%), Positives = 111/129 (86%)
Frame = +3
Query: 237 TSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFR 416
T+A+ A R+K FA+YRW+PD+ KP+ Q ++VDL+ C PMVLDAL+KIKNEVD TLTFR
Sbjct: 13 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYKVDLNKCGPMVLDALIKIKNEVDSTLTFR 72
Query: 417 RSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQY 596
RSCREG+CGSCAMNI+G NTLAC ID N++K +KIYPLPHMYV+KDLVPDL+NFY QY
Sbjct: 73 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 132
Query: 597 QSIEPWLQR 623
+SIEP+L++
Sbjct: 133 KSIEPYLKK 141
>D10245-1|BAA01089.1| 262|Homo sapiens succinate-ubiquinone
oxidoreductase iron sulfur subunit protein.
Length = 262
Score = 208 bits (507), Expect = 2e-53
Identities = 89/129 (68%), Positives = 111/129 (86%)
Frame = +3
Query: 237 TSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFR 416
T+A+ A R+K FA+YRW+PD+ KP+ Q ++VDL+ C PMVLDAL+KIKNEVD TLTFR
Sbjct: 13 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYKVDLNKCGPMVLDALIKIKNEVDSTLTFR 72
Query: 417 RSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQY 596
RSCREG+CGSCAMNI+G NTLAC ID N++K +KIYPLPHMYV+KDLVPDL+NFY QY
Sbjct: 73 RSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQY 132
Query: 597 QSIEPWLQR 623
+SIEP+L++
Sbjct: 133 KSIEPYLKK 141
>U17886-1|AAA80581.1| 281|Homo sapiens succinate dehydrogenase
iron-protein subunit B protein.
Length = 281
Score = 206 bits (502), Expect = 6e-53
Identities = 90/130 (69%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
Frame = +3
Query: 237 TSASLAKRVKTFAVYRWNPDEPDKKPYTQNFEVDLDD-CAPMVLDALLKIKNEVDPTLTF 413
T+A+ A R+K FA+YRW+PD+ KP+ Q +EVDL++ C PMVLDAL+KIKNEVD TLTF
Sbjct: 31 TAAATAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNNRCGPMVLDALIKIKNEVDSTLTF 90
Query: 414 RRSCREGVCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQ 593
RRSCREG+CGSCAMNI+G NTLAC ID N++K +KIYPLPHMYV+KDLVPDL+NFY Q
Sbjct: 91 RRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQ 150
Query: 594 YQSIEPWLQR 623
Y+SIEP+L++
Sbjct: 151 YKSIEPYLKK 160
>BC126168-1|AAI26169.1| 793|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 10 protein.
Length = 793
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 589 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 623
>BC117299-1|AAI17300.1| 793|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 10 protein.
Length = 793
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 589 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 623
>AY358577-1|AAQ88940.1| 747|Homo sapiens disulfide isomerase
protein.
Length = 747
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 543 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 577
>AL832646-1|CAD89982.1| 792|Homo sapiens hypothetical protein
protein.
Length = 792
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 588 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 622
>AL137648-1|CAB70858.1| 464|Homo sapiens hypothetical protein
protein.
Length = 464
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 260 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 294
>AK074905-1|BAC11281.1| 277|Homo sapiens protein ( Homo sapiens
cDNA FLJ90424 fis, clone NT2RP3000436, highly similar to
ER-resident protein ERdj5. ).
Length = 277
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 73 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 107
>AK027696-1|BAB55304.1| 793|Homo sapiens protein ( Homo sapiens
cDNA FLJ14790 fis, clone NT2RP4000973, weakly similar to
PROBABLE PROTEIN DISULFIDE ISOMERASE P5 PRECURSOR (EC
5.3.4.1). ).
Length = 793
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 589 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 623
>AK027647-1|BAB55263.1| 793|Homo sapiens protein ( Homo sapiens
cDNA FLJ14741 fis, clone NT2RP3002628, weakly similar to
PROBABLE PROTEIN DISULFIDE ISOMERASE P5 PRECURSOR (EC
5.3.4.1). ).
Length = 793
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 589 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 623
>AK027450-1|BAB55121.1| 768|Homo sapiens protein ( Homo sapiens
cDNA FLJ14544 fis, clone NT2RM2001547, weakly similar to
PROBABLE PROTEIN DISULFIDE ISOMERASE P5 PRECURSOR (EC
5.3.4.1). ).
Length = 768
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 564 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 598
>AF490904-1|AAM09527.1| 747|Homo sapiens macrothioredoxin protein.
Length = 747
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 543 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 577
>AF038503-1|AAN73271.1| 793|Homo sapiens ER-resident protein ERdj5
protein.
Length = 793
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 589 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 623
>AC105396-1|AAY24240.1| 464|Homo sapiens unknown protein.
Length = 464
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 359 HRCAVVQIHFEILRIRFLVGLIGVPSIDCEGLNTFC 252
H C V+ ++ + R L GLI V SIDC+ ++FC
Sbjct: 260 HPCQVLMPEWKRMA-RTLTGLINVGSIDCQQYHSFC 294
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,669,747
Number of Sequences: 237096
Number of extensions: 1960985
Number of successful extensions: 7494
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7493
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -