Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o09f
(623 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L27705-1|AAA61925.1| 297|Drosophila melanogaster succinate dehy... 212 4e-55
AY118923-1|AAM50783.1| 297|Drosophila melanogaster LD23740p pro... 212 4e-55
AE013599-229|AAF57396.1| 297|Drosophila melanogaster CG3283-PA ... 212 4e-55
AY089563-1|AAL90301.1| 437|Drosophila melanogaster RE03249p pro... 199 3e-51
AE014298-2790|AAF48905.2| 437|Drosophila melanogaster CG7349-PA... 198 4e-51
AE014296-584|AAF47730.1| 1381|Drosophila melanogaster CG12734-PA... 32 0.55
AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubuli... 28 8.9
AF132176-1|AAD34764.1| 797|Drosophila melanogaster unknown prot... 28 8.9
AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB... 28 8.9
AE014298-759|AAF46049.3| 857|Drosophila melanogaster CG32763-PA... 28 8.9
AE014296-526|AAF47697.2| 420|Drosophila melanogaster CG9969-PA ... 28 8.9
>L27705-1|AAA61925.1| 297|Drosophila melanogaster succinate
dehydrogenase iron-proteinsubunit protein.
Length = 297
Score = 212 bits (517), Expect = 4e-55
Identities = 89/122 (72%), Positives = 104/122 (85%)
Frame = +3
Query: 258 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 437
++K F +YRWNPD +KPY Q +EVDL +C PMVLDAL+KIKNE+DPTLTFRRSCREG+
Sbjct: 45 QIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGI 104
Query: 438 CGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
CGSCAMNI G NTLACIS ID N SK K+YPLPHMYVV+DLVPD+ NFY QY++I+PWL
Sbjct: 105 CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWL 164
Query: 618 QR 623
QR
Sbjct: 165 QR 166
>AY118923-1|AAM50783.1| 297|Drosophila melanogaster LD23740p
protein.
Length = 297
Score = 212 bits (517), Expect = 4e-55
Identities = 89/122 (72%), Positives = 104/122 (85%)
Frame = +3
Query: 258 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 437
++K F +YRWNPD +KPY Q +EVDL +C PMVLDAL+KIKNE+DPTLTFRRSCREG+
Sbjct: 45 QIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGI 104
Query: 438 CGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
CGSCAMNI G NTLACIS ID N SK K+YPLPHMYVV+DLVPD+ NFY QY++I+PWL
Sbjct: 105 CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWL 164
Query: 618 QR 623
QR
Sbjct: 165 QR 166
>AE013599-229|AAF57396.1| 297|Drosophila melanogaster CG3283-PA
protein.
Length = 297
Score = 212 bits (517), Expect = 4e-55
Identities = 89/122 (72%), Positives = 104/122 (85%)
Frame = +3
Query: 258 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 437
++K F +YRWNPD +KPY Q +EVDL +C PMVLDAL+KIKNE+DPTLTFRRSCREG+
Sbjct: 45 QIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGI 104
Query: 438 CGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
CGSCAMNI G NTLACIS ID N SK K+YPLPHMYVV+DLVPD+ NFY QY++I+PWL
Sbjct: 105 CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWL 164
Query: 618 QR 623
QR
Sbjct: 165 QR 166
>AY089563-1|AAL90301.1| 437|Drosophila melanogaster RE03249p
protein.
Length = 437
Score = 199 bits (485), Expect = 3e-51
Identities = 86/123 (69%), Positives = 105/123 (85%)
Frame = +3
Query: 255 KRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREG 434
+R+KTF +YRW P + +P TQ +EVDL+ C MVLDAL+KIKNE+DPTLTFRRSCREG
Sbjct: 185 QRLKTFEIYRWKPGD---QPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRRSCREG 241
Query: 435 VCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPW 614
+CGSCAMNI+G NTLAC+S IDQN SK +IYPLPH+YVV+DLVPD++ FY QY+SI+PW
Sbjct: 242 ICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPW 301
Query: 615 LQR 623
LQR
Sbjct: 302 LQR 304
>AE014298-2790|AAF48905.2| 437|Drosophila melanogaster CG7349-PA
protein.
Length = 437
Score = 198 bits (484), Expect = 4e-51
Identities = 86/122 (70%), Positives = 104/122 (85%)
Frame = +3
Query: 258 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 437
R+KTF +YRW P + +P TQ +EVDL+ C MVLDAL+KIKNE+DPTLTFRRSCREG+
Sbjct: 186 RLKTFEIYRWKPGD---QPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRRSCREGI 242
Query: 438 CGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 617
CGSCAMNI+G NTLAC+S IDQN SK +IYPLPH+YVV+DLVPD++ FY QY+SI+PWL
Sbjct: 243 CGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPWL 302
Query: 618 QR 623
QR
Sbjct: 303 QR 304
>AE014296-584|AAF47730.1| 1381|Drosophila melanogaster CG12734-PA,
isoform A protein.
Length = 1381
Score = 32.3 bits (70), Expect = 0.55
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 445 EPQTPSRHERLKVRVGSTSFLIFSKASNTIGAQSS 341
EPQTP + VG +FL++++ + TIG S+
Sbjct: 1304 EPQTPQKSTENNAPVGPATFLMYNRINTTIGGASN 1338
>AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubulin
ring protein protein.
Length = 1092
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 419 FVPRGRLWFLCDEYRRRQHSGLHQPYRSKHFQADEDLSSTSHVRRQRLGPRSDQLL 586
F+ R + D + RR H F +ED ++ SHVR++ +G D LL
Sbjct: 545 FISLKRYCIIIDGWWRRAALEDHLREFIVEFCYEEDANTRSHVRKRNMGMEDDLLL 600
>AF132176-1|AAD34764.1| 797|Drosophila melanogaster unknown
protein.
Length = 797
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 256 NVLRPSQSIDGTPMSPTRNLIRKISKWIWTTAHLWY 363
N RPS+ P + R +R+ + +W H+W+
Sbjct: 34 NGKRPSRKYRRRPKNLMREYVRRQRRHVWLETHIWH 69
>AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB,
isoform B protein.
Length = 1092
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 419 FVPRGRLWFLCDEYRRRQHSGLHQPYRSKHFQADEDLSSTSHVRRQRLGPRSDQLL 586
F+ R + D + RR H F +ED ++ SHVR++ +G D LL
Sbjct: 545 FISLKRYCIIIDGWWRRAALEDHLREFIVEFCYEEDANTRSHVRKRNMGMEDDLLL 600
>AE014298-759|AAF46049.3| 857|Drosophila melanogaster CG32763-PA
protein.
Length = 857
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 256 NVLRPSQSIDGTPMSPTRNLIRKISKWIWTTAHLWY 363
N RPS+ P + R +R+ + +W H+W+
Sbjct: 94 NGKRPSRKYRRRPKNLMREYVRRQRRHVWLETHIWH 129
>AE014296-526|AAF47697.2| 420|Drosophila melanogaster CG9969-PA
protein.
Length = 420
Score = 28.3 bits (60), Expect = 8.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 411 FRRSCREGVCGSCAMNIDGVNTLACISHI 497
+ +C +CG CA++ DGV + C+ +
Sbjct: 213 YLETCSLYICGMCAVSFDGVFIVLCLHSV 241
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,231,264
Number of Sequences: 53049
Number of extensions: 592186
Number of successful extensions: 1797
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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