Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o08r
(350 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.13
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 1.2
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 28 2.2
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical pr... 27 2.9
D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic nucleoti... 27 2.9
Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical pr... 27 3.8
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 27 3.8
U00052-7|AAK21422.2| 232|Caenorhabditis elegans Fatty acid/reti... 27 3.8
AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia t... 27 3.8
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 27 5.0
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 27 5.0
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 27 5.0
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 5.0
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 27 5.0
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 27 5.0
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 27 5.0
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 27 5.0
Z49867-2|CAA90028.1| 346|Caenorhabditis elegans Hypothetical pr... 26 6.6
AL021472-1|CAA16299.2| 397|Caenorhabditis elegans Hypothetical ... 26 6.6
AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical ... 26 6.6
Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical pr... 26 8.7
U53151-4|AAB37066.1| 335|Caenorhabditis elegans Hypothetical pr... 26 8.7
AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical ... 26 8.7
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -2
Query: 229 PKEDNSLNTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 62
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -2
Query: 223 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 53
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -2
Query: 223 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 53
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 226 KEDNSLNTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 101
K+D L E +K EE +EKVE +AP K KN G ++D
Sbjct: 45 KKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 226 KEDNSLNTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 101
K+D L E +K EE +EKVE +AP K KN G ++D
Sbjct: 45 KKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88
>Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical
protein T06D8.2 protein.
Length = 708
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2
Query: 196 ESAKKTIEELREKVESALAPETVK 125
E+ K+ IEE+REK++S A +T K
Sbjct: 478 ENRKEGIEEIREKIDSLSAEKTSK 501
>Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical
protein ZC84.2 protein.
Length = 733
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 238 RDAPKEDNSLNTLAESAKKTIEELREKVESAL 143
R+ K+DN L+ A +KT+EE+ E + +A+
Sbjct: 614 REILKKDNLLDENAPEEQKTVEEIAEHLNNAV 645
>D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 733
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 238 RDAPKEDNSLNTLAESAKKTIEELREKVESAL 143
R+ K+DN L+ A +KT+EE+ E + +A+
Sbjct: 614 REILKKDNLLDENAPEEQKTVEEIAEHLNNAV 645
>Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical
protein H01G02.2 protein.
Length = 323
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -2
Query: 229 PKEDNSLN--TLAESAKKTIE--ELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 62
P EDN N T+ ++ K E E R L + + NF + S +F+K LK +E
Sbjct: 224 PNEDNWPNWRTMPDANKLLFEPKEPRNNWTEILLCKEISNNFTEFLGSHLQFFKRLKASE 283
Query: 61 APK 53
K
Sbjct: 284 LLK 286
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 202 LAESAKKTIEELREKVESALAPE 134
L E A K +EE ++K++SA APE
Sbjct: 436 LEEHAVKKLEEEKDKLQSAAAPE 458
>U00052-7|AAK21422.2| 232|Caenorhabditis elegans Fatty acid/retinol
binding proteinprotein 8 protein.
Length = 232
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -2
Query: 217 NSLNTLAESAKKTIEELRE--KVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPKA*E 44
N+ + AK +++ E K+E A PE VK ++++ NLKP + K E
Sbjct: 156 NNAKSAVSGAKALLQDDSEAAKIEEAF-PEAVKLLNSKKFEAYSIIVNNLKPLDCVKDRE 214
Query: 43 VIF 35
+F
Sbjct: 215 QVF 217
>AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia
telangectasia mutated)family protein 1 protein.
Length = 649
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 253 HAFVKRDAPKEDNSLNTLAESA 188
H F K D K DNSLN+ A A
Sbjct: 78 HQFEKNDLEKVDNSLNSAARKA 99
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform d protein.
Length = 1379
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 235 DAPKEDNSLNTLAESAKKTIEELREKVESALA 140
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform b protein.
Length = 4034
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 235 DAPKEDNSLNTLAESAKKTIEELREKVESALA 140
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform a protein.
Length = 1633
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 235 DAPKEDNSLNTLAESAKKTIEELREKVESALA 140
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform c protein.
Length = 7548
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 235 DAPKEDNSLNTLAESAKKTIEELREKVESALA 140
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 208 NTLAESAKKTIEELREKVESALAPETVKKN 119
N E K+T+E LREKV+ A +++N
Sbjct: 285 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 314
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 208 NTLAESAKKTIEELREKVESALAPETVKKN 119
N E K+T+E LREKV+ A +++N
Sbjct: 302 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 331
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 208 NTLAESAKKTIEELREKVESALAPETVKKN 119
N E K+T+E LREKV+ A +++N
Sbjct: 302 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 331
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 208 NTLAESAKKTIEELREKVESALAPETVKKN 119
N E K+T+E LREKV+ A +++N
Sbjct: 285 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 314
>Z49867-2|CAA90028.1| 346|Caenorhabditis elegans Hypothetical
protein C33D3.4 protein.
Length = 346
Score = 26.2 bits (55), Expect = 6.6
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +3
Query: 93 LKLSTIVPKFFLTVSGAKADSTFSLNSSIVFFALSASVFRLLSSLGASRLTNACTLARQI 272
L+ +V KFF V + F L S I + R+L ++RL + ++ I
Sbjct: 38 LEKEALVRKFFANVEFNAIEFVFKLLSLIKMLIIFR---RMLEKWDSNRLYSIFSILAII 94
Query: 273 ANKIISSLFILDI*ERLHESATES 344
NKI + + D+ ++H+ +S
Sbjct: 95 FNKIEKNHTLDDLWNKIHQIMKDS 118
>AL021472-1|CAA16299.2| 397|Caenorhabditis elegans Hypothetical
protein Y17D7B.1 protein.
Length = 397
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 259 NVHAFVKRDAPKEDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFN 92
N+H++ + A KE+N N A K ++ + E ++ L ET + + D FN
Sbjct: 333 NLHSYYEEAARKEENPKN-YASRLTKMMQIVNEMLKMQLKQET-DMDLALLFDMFN 386
>AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical
protein T15B7.11 protein.
Length = 355
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 14 GLCT*ILKNYFSGFRCF--RGLQIFIKFVEAVYHRAKVFL 127
GL ++NY + F LQ+F+ ++ V+H + +FL
Sbjct: 92 GLMQLFIRNYSDQYMLFITAYLQLFVDYLAVVFHASSLFL 131
>Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical protein
C35A5.8 protein.
Length = 1078
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 159 FSLNSSI-VFFALSASVFRLLSSLGASRLTNACTLARQIANKIISSL 296
F N S+ VF AL S+ LSS+ A +T+AC+ I N + L
Sbjct: 892 FVTNLSVDVFCALLRSIHSGLSSVDAIVITSACSSLDTILNYLYRRL 938
>Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical
protein M28.7 protein.
Length = 682
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/36 (33%), Positives = 26/36 (72%)
Frame = -2
Query: 196 ESAKKTIEELREKVESALAPETVKKNFGTMVDSFNE 89
E+A + +++L++++ +AL+PE + +F VDS +E
Sbjct: 76 ENALEQLDKLKQRL-TALSPEKEQLSFSVSVDSQSE 110
>U53151-4|AAB37066.1| 335|Caenorhabditis elegans Hypothetical
protein T05B11.1 protein.
Length = 335
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 244 VKRDAPKEDNSLNTLAESAKKTIEELREKVE 152
VKR ED S +T +ESA ++E KVE
Sbjct: 90 VKRSERIEDPSRSTSSESANSFVQENLRKVE 120
>AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical
protein ZK355.5 protein.
Length = 505
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 221 FFRSISFDECMHIGEADSQQDNQQLVHFGYLR 316
FF SI FDEC + + + D L FG +R
Sbjct: 144 FFFSIPFDECSFQVKNNPKLDANDLCEFGGVR 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,614,622
Number of Sequences: 27780
Number of extensions: 143221
Number of successful extensions: 455
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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