Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o07f
(566 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 294 4e-80
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 289 1e-78
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 283 9e-77
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 3e-51
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 171 4e-43
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 144 4e-35
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 136 2e-32
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 134 5e-32
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 133 1e-31
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 132 3e-31
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 4e-31
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 104 4e-23
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 9e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 5e-13
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 66 1e-11
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 66 2e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 66 2e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 44 9e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 42 5e-04
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.16
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 0.87
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 30 1.5
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.0
SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09) 29 2.6
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 3.5
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 6.1
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.1
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 27 8.1
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 294 bits (721), Expect = 4e-80
Identities = 133/143 (93%), Positives = 137/143 (95%)
Frame = +3
Query: 72 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 251
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 252 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
NEA+GGKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 265 NEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 324
Query: 432 LVDSVLDVVRKEAESCDCLQGFQ 500
LVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 325 LVDSVLDVVRKEAESCDCLQGFQ 347
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 289 bits (709), Expect = 1e-78
Identities = 130/134 (97%), Positives = 132/134 (98%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 459 RKEAESCDCLQGFQ 500
RKEAESCDCLQGFQ
Sbjct: 121 RKEAESCDCLQGFQ 134
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 283 bits (693), Expect = 9e-77
Identities = 124/134 (92%), Positives = 132/134 (98%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 459 RKEAESCDCLQGFQ 500
RKEAESCDC+QGFQ
Sbjct: 121 RKEAESCDCIQGFQ 134
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 198 bits (482), Expect = 3e-51
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 374
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 171 bits (415), Expect = 4e-43
Identities = 76/78 (97%), Positives = 78/78 (100%)
Frame = +3
Query: 267 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 446
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 447 LDVVRKEAESCDCLQGFQ 500
LDVVRKEAESCDC+QGFQ
Sbjct: 62 LDVVRKEAESCDCIQGFQ 79
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 144 bits (349), Expect = 4e-35
Identities = 60/80 (75%), Positives = 72/80 (90%)
Frame = +3
Query: 261 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
+GG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 441 SVLDVVRKEAESCDCLQGFQ 500
++ DV+RKEAE+CDC+QG Q
Sbjct: 71 NIFDVLRKEAENCDCMQGVQ 90
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 136 bits (328), Expect = 2e-32
Identities = 64/135 (47%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 272
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 273 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 452
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 453 VVRKEAESCDCLQGF 497
+RK A+ C LQGF
Sbjct: 121 RIRKLADQCTGLQGF 135
Score = 133 bits (322), Expect = 8e-32
Identities = 62/134 (46%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 102 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 275
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 276 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 455
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 456 VRKEAESCDCLQGF 497
+RK A+ C LQGF
Sbjct: 555 IRKLADQCTGLQGF 568
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 134 bits (324), Expect = 5e-32
Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 272
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 273 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 452
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 453 VVRKEAESCDCLQGF 497
+RK A+ C LQGF
Sbjct: 706 RIRKLADQCTGLQGF 720
Score = 132 bits (320), Expect = 1e-31
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 102 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 275
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 276 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 455
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 456 VRKEAESCDCLQGF 497
+RK A+ C LQGF
Sbjct: 186 IRKLADQCTGLQGF 199
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +3
Query: 102 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 275
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 276 VPRAILVDLEPGTMDSV 326
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 133 bits (321), Expect = 1e-31
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 102 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 275
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 276 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 455
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 456 VRKEAESCDCLQGF 497
+RK A+ C LQGF
Sbjct: 121 IRKLADQCTGLQGF 134
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 132 bits (318), Expect = 3e-31
Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 272
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 273 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 452
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 453 VVRKEAESCDCLQGF 497
+RK A+ C LQGF
Sbjct: 121 RLRKLADGCTGLQGF 135
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 132 bits (318), Expect = 3e-31
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 272
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 273 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 452
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 453 VVRKEAESCDCLQGF 497
RK A+ C LQGF
Sbjct: 121 RCRKLADQCTGLQGF 135
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 131 bits (316), Expect = 4e-31
Identities = 59/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 102 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 275
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 276 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 455
VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 456 VRKEAESCDCLQGF 497
+RK A+ C LQGF
Sbjct: 540 IRKLADQCSGLQGF 553
Score = 113 bits (272), Expect = 9e-26
Identities = 51/120 (42%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Frame = +3
Query: 144 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEPGTM 317
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 318 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 497
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 130 bits (313), Expect = 1e-30
Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 102 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 275
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 276 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 455
VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 456 VRKEAESCDCLQGF 497
+RK A+ C LQGF
Sbjct: 926 IRKLADQCTGLQGF 939
Score = 129 bits (312), Expect = 1e-30
Identities = 61/134 (45%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Frame = +3
Query: 102 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 275
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 276 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 455
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 456 VRKEAESCDCLQGF 497
+RK A+ C LQGF
Sbjct: 493 LRKLADGCTGLQGF 506
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 104 bits (250), Expect = 4e-23
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 272
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 273 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 452
+VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 453 VVRKEAESCDCLQGF 497
+RK A+ C LQGF
Sbjct: 111 RLRKLADQCSGLQGF 125
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/89 (46%), Positives = 59/89 (66%)
Frame = +3
Query: 231 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 410
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 411 HYTEGAELVDSVLDVVRKEAESCDCLQGF 497
HYT G E +D LD +RK A+ C LQGF
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGF 100
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 98.7 bits (235), Expect = 3e-21
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +3
Query: 252 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+EA+ GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 432 LVDSVLDVVRKEAESCDCLQGF 497
+V+ V+D +RK + C LQGF
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGF 1046
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 73.7 bits (173), Expect = 9e-14
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +3
Query: 318 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 497
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 71.3 bits (167), Expect = 5e-13
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +3
Query: 324 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 497
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.5 bits (165), Expect = 9e-13
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 272
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 273 YVPRAILVDLEPGTMDSVR 329
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +3
Query: 378 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 500
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Frame = +3
Query: 108 IVHIQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 269
IV +Q GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 270 KYVPRAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 440
RA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 441 SVLDVVRKEAESCDCLQGF 497
VLD+V++E E CD L GF
Sbjct: 123 KVLDLVQREVEKCDRLDGF 141
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +3
Query: 324 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 497
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 324 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 464
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 324 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 464
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 266
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 267 GKY 275
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 156 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 257
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 44.0 bits (99), Expect = 9e-05
Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Frame = +3
Query: 117 IQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 296
+ GQCGNQIG + ++ + P H D L R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCV 44
Query: 297 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 455
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 456 VRKEAESCDCLQG 494
+RKE E CD G
Sbjct: 104 MRKEVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.5 bits (93), Expect = 5e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 282 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 401
RA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.1 bits (72), Expect = 0.16
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -1
Query: 494 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVH 315
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 314 GAGL 303
G+
Sbjct: 264 RCGI 267
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 0.87
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 475 DSASFRTTSKTESTSSAPSV*CPLAQL 395
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 343 PKGPERTESMVPGSKSTRMARGTYLP--PEA 257
PKGPER E+ + R +G YLP PEA
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLPSNPEA 868
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 456 VRKEAESCDCLQGFQ 500
+RKEAE CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 412 CPLAQLLPAPDCPKTKLSGRKICP 341
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 412 CPLAQLLPAPDCPKTKLSGRKICP 341
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 412 CPLAQLLPAPDCPKTKLSGRKICP 341
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 412 CPLAQLLPAPDCPKTKLSGRKICP 341
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 412 CPLAQLLPAPDCPKTKLSGRKICP 341
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 412 CPLAQLLPAPDCPKTKLSGRKICP 341
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 412 CPLAQLLPAPDCPKTKLSGRKICP 341
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 412 CPLAQLLPAPDCPKTKLSGRKICP 341
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
>SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09)
Length = 166
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 470 GIV*LPPGIPTDTLARRRHRFRYGHPPH 553
G+V LPPG+ T H RYGHP H
Sbjct: 7 GMVTLPPGMVTLPPGMVTHFTRYGHPFH 34
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = -2
Query: 391 PAPDCPKTKLSGRKICPKGPERTESMVPGS----KSTRMARGTYLPPEASL*YTLMRSN 227
P P P T + P GP+ PG TR+ GT PP A ++RSN
Sbjct: 102 PPPTMPPTPPPPQTPAPPGPDTPAPPAPGGCGAKPHTRIVGGTKAPPGAWPWQAMLRSN 160
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 388 APDCPKTKLSGRKICPKGPERTESMVPGSKST 293
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 424 PSV*CPLAQLLPAPD-CPKTKLSGRKICPKGPERTESMVPGSKSTRMARGTYLPPEA 257
P + P+ Q D CP+ + RK P G + + G+ S +++G +PP A
Sbjct: 440 PGMTHPMGQPTAMGDLCPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 269
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 270 KYVPRAILVDLE 305
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 168 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 308
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1
Query: 488 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADR 321
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -2
Query: 469 ASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSKSTR 290
AS T T+ S+ P+ + + A PK+ ++ PK + + V KS
Sbjct: 1749 ASTEATEMTQKFSNVPATVALKSSNVEAKITPKSSTDAARLIPKASKSSTGSV-NVKSRS 1807
Query: 289 MARGTYLPPEAS 254
T + P+AS
Sbjct: 1808 STNATQITPKAS 1819
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 254 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 153
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,362,138
Number of Sequences: 59808
Number of extensions: 315780
Number of successful extensions: 952
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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