Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o07f
(566 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 286 9e-78
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 277 5e-75
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 270 4e-73
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 270 4e-73
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 269 1e-72
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 268 2e-72
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 190 5e-49
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 190 5e-49
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 139 1e-33
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 139 1e-33
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 137 4e-33
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 137 4e-33
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 137 6e-33
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 136 8e-33
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 133 1e-31
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 133 1e-31
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 132 1e-31
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 131 4e-31
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 130 5e-31
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 130 5e-31
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 130 5e-31
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 128 2e-30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 124 3e-29
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 108 2e-24
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 105 3e-23
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 105 3e-23
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical p... 28 4.1
Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical p... 28 4.1
Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical pr... 28 4.1
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 28 4.1
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z46934-5|CAA87043.1| 414|Caenorhabditis elegans Hypothetical pr... 28 5.4
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 286 bits (701), Expect = 9e-78
Identities = 128/134 (95%), Positives = 133/134 (99%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 459 RKEAESCDCLQGFQ 500
RKEAESCDCLQGFQ
Sbjct: 121 RKEAESCDCLQGFQ 134
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 277 bits (678), Expect = 5e-75
Identities = 122/134 (91%), Positives = 129/134 (96%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 459 RKEAESCDCLQGFQ 500
RKEAE CDCLQGFQ
Sbjct: 121 RKEAEGCDCLQGFQ 134
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 270 bits (663), Expect = 4e-73
Identities = 121/134 (90%), Positives = 128/134 (95%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 459 RKEAESCDCLQGFQ 500
RKEAES DCLQGFQ
Sbjct: 121 RKEAESTDCLQGFQ 134
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 270 bits (663), Expect = 4e-73
Identities = 121/134 (90%), Positives = 128/134 (95%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 459 RKEAESCDCLQGFQ 500
RKEAES DCLQGFQ
Sbjct: 121 RKEAESTDCLQGFQ 134
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 269 bits (659), Expect = 1e-72
Identities = 117/134 (87%), Positives = 128/134 (95%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 459 RKEAESCDCLQGFQ 500
RKEAE CDCLQGFQ
Sbjct: 121 RKEAEGCDCLQGFQ 134
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 268 bits (656), Expect = 2e-72
Identities = 116/134 (86%), Positives = 128/134 (95%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 459 RKEAESCDCLQGFQ 500
RKEAE CDCLQGFQ
Sbjct: 121 RKEAEGCDCLQGFQ 134
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 190 bits (464), Expect = 5e-49
Identities = 82/134 (61%), Positives = 107/134 (79%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 459 RKEAESCDCLQGFQ 500
R+EAE+ D L+GFQ
Sbjct: 121 RREAEAADSLEGFQ 134
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 190 bits (464), Expect = 5e-49
Identities = 82/134 (61%), Positives = 107/134 (79%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 459 RKEAESCDCLQGFQ 500
R+EAE+ D L+GFQ
Sbjct: 121 RREAEAADSLEGFQ 134
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 139 bits (337), Expect = 1e-33
Identities = 59/133 (44%), Positives = 85/133 (63%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 459 RKEAESCDCLQGF 497
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 139 bits (337), Expect = 1e-33
Identities = 59/133 (44%), Positives = 85/133 (63%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 459 RKEAESCDCLQGF 497
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 137 bits (332), Expect = 4e-33
Identities = 59/133 (44%), Positives = 86/133 (64%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 459 RKEAESCDCLQGF 497
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 137 bits (332), Expect = 4e-33
Identities = 59/133 (44%), Positives = 86/133 (64%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 459 RKEAESCDCLQGF 497
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 137 bits (331), Expect = 6e-33
Identities = 65/135 (48%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 272
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 273 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 452
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 453 VVRKEAESCDCLQGF 497
VR+ E C LQGF
Sbjct: 121 RVRRLTERCQSLQGF 135
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 136 bits (330), Expect = 8e-33
Identities = 61/133 (45%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
Frame = +3
Query: 102 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 278
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 459 RKEAESCDCLQGF 497
RK+ E+C+ LQGF
Sbjct: 126 RKQTENCEGLQGF 138
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 133 bits (321), Expect = 1e-31
Identities = 56/133 (42%), Positives = 84/133 (63%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 459 RKEAESCDCLQGF 497
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 133 bits (321), Expect = 1e-31
Identities = 56/133 (42%), Positives = 84/133 (63%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 459 RKEAESCDCLQGF 497
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 132 bits (320), Expect = 1e-31
Identities = 59/137 (43%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
Frame = +3
Query: 93 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASG 266
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 267 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 446
GK+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 447 LDVVRKEAESCDCLQGF 497
+D VR+ E+C LQGF
Sbjct: 124 MDRVRRLVENCRGLQGF 140
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 131 bits (316), Expect = 4e-31
Identities = 61/135 (45%), Positives = 87/135 (64%), Gaps = 3/135 (2%)
Frame = +3
Query: 102 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 272
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 273 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 452
+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 453 VVRKEAESCDCLQGF 497
V++ AE+C+ LQGF
Sbjct: 127 RVKRLAENCNGLQGF 141
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 130 bits (315), Expect = 5e-31
Identities = 57/135 (42%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 272
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 273 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 452
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 453 VVRKEAESCDCLQGF 497
+R+ A++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 130 bits (315), Expect = 5e-31
Identities = 57/135 (42%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 272
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 273 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 452
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 453 VVRKEAESCDCLQGF 497
+R+ A++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 130 bits (315), Expect = 5e-31
Identities = 57/135 (42%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 272
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 273 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 452
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 453 VVRKEAESCDCLQGF 497
+R+ A++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 128 bits (310), Expect = 2e-30
Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +3
Query: 102 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 275
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 276 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 455
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 456 VRKEAESCDCLQGF 497
+R+ A++C LQGF
Sbjct: 121 IRRLADNCTGLQGF 134
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 124 bits (300), Expect = 3e-29
Identities = 55/133 (41%), Positives = 85/133 (63%)
Frame = +3
Query: 99 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 278
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 279 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 458
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 459 RKEAESCDCLQGF 497
R+ A +C+ LQGF
Sbjct: 120 RRLANNCEGLQGF 132
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 108 bits (260), Expect = 2e-24
Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Frame = +3
Query: 177 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 347
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 348 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 497
+F P+ + G+ A N +A+G YT G E++D V+D V++ AE+C+ LQGF
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 105 bits (251), Expect = 3e-23
Identities = 50/132 (37%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Frame = +3
Query: 108 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 287
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 288 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 458
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 459 RKEAESCDCLQG 494
+EAE+ + L G
Sbjct: 125 IREAENTNNLDG 136
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 105 bits (251), Expect = 3e-23
Identities = 50/132 (37%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Frame = +3
Query: 108 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 287
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 288 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 458
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 459 RKEAESCDCLQG 494
+EAE+ + L G
Sbjct: 125 IREAENTNNLDG 136
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -2
Query: 481 SHDSASFRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTES 317
S A R + + S SS+PS CP LL PAP P + G PK +
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVP 353
Query: 316 MVPGSKST 293
PG+ T
Sbjct: 354 EPPGNMKT 361
>Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 540 PYRNRCRRRASVSVGIPGGNHTIPLPF 460
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 540 PYRNRCRRRASVSVGIPGGNHTIPLPF 460
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 540 PYRNRCRRRASVSVGIPGGNHTIPLPF 460
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 540 PYRNRCRRRASVSVGIPGGNHTIPLPF 460
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = -3
Query: 513 ASVSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSCCXXXXXXXRSCPDGRSVRKV 334
+S P T+P P+ + A +PP S P+PS + P
Sbjct: 165 SSTPTPYPSSQPTMPTPYPTG---SGAAPYPPSSTPYPSAGAMGYNPYMNVPQSTPYPMG 221
Query: 333 QSGQSPWCRAPS 298
SG SP+ A S
Sbjct: 222 ASGASPYPSASS 233
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 165 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 302
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>Z46934-5|CAA87043.1| 414|Caenorhabditis elegans Hypothetical
protein ZK1320.5 protein.
Length = 414
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -1
Query: 194 GVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVLFM*TINYLTLKXCSARSTHCR---- 27
G++ + +D + S L+A + YDF H +LF+ I L SA+ +H R
Sbjct: 153 GLEVLQSSNDEISIKSSLIANV----YYDFYHGILFLPCIIISVLMFKSAKGSHTRACLL 208
Query: 26 GRLKNQKK 3
G ++N +K
Sbjct: 209 GGMRNDQK 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,154,055
Number of Sequences: 27780
Number of extensions: 225755
Number of successful extensions: 757
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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