Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o06r
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 50 2e-06
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 48 9e-06
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 48 9e-06
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 42 3e-04
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 42 3e-04
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 40 0.002
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.65
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 29 2.6
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 29 2.6
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical... 29 4.6
AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical... 29 4.6
Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 28 8.0
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 28 8.0
AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical... 28 8.0
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Frame = -2
Query: 675 RNCSGFRNCVNGVGYDFV-CPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRE 499
R+CS C G ++ C LAFN T +C++P +V+ C+ C E
Sbjct: 1194 RDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQTNGECSEHG---- 1249
Query: 498 LGPPAGYRYYRSDNNCQKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGACPAE 328
+ NNC+ ++ C+ G V+ C + F+ L S C V +C +
Sbjct: 1250 -------SFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQ 1299
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 687 LGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEA 541
+ DA NC F CV G CP G FN C+WP V C +A
Sbjct: 1252 IADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQA 1300
Score = 45.2 bits (102), Expect = 5e-05
Identities = 42/144 (29%), Positives = 57/144 (39%), Gaps = 23/144 (15%)
Frame = -2
Query: 699 GYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEA------- 541
G F LG ++ + C NG C + L FN T C + DEV +C ++
Sbjct: 698 GLFSLGCSQK---YIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQGSTSSPVI 754
Query: 540 ----------FLGFRCPEVPISRELGPPAGYR--YYRS---DNNC-QKYFLCIDGHPRVL 409
+ G +VP + + P G R Y S D C QKY C D V
Sbjct: 755 TTPGQDQSSNYYGIPSDDVPSTTQ--TPVGDRCAYVASGLFDLGCSQKYIQCSDSAASVR 812
Query: 408 YCGGESAFDDLTSTCVSADEVGAC 337
C G FD+ + +C DEV C
Sbjct: 813 ECEGSLYFDERSQSCRFRDEVFKC 836
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -2
Query: 705 QFGYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRC-EWPDEV 562
Q G + +G CS F +CV G Y CPD L FN T C E DEV
Sbjct: 103 QDGIYSIG----CSNQFISCVAGGAYMAKCPDSLVFNERTQDCRESCDEV 148
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 450 QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGACPAE 328
QKY C +G V CG F++ T C DEV C ++
Sbjct: 706 QKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = -2
Query: 699 GYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPD 568
G+F G +C F CVNG+ Y+F CP+GL+F+++T C+ PD
Sbjct: 570 GFF--GVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -2
Query: 681 DARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRC 580
++ NC F C++ Y CP GL +++ C
Sbjct: 491 NSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYC 524
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 48.4 bits (110), Expect = 5e-06
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Frame = -2
Query: 714 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFL 535
C GYF G R S F C NG+ CPDGL F+ + C++ V +CD E+
Sbjct: 239 CGEVDGYFSFG--RCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLES-S 295
Query: 534 GFRCPEVPISRELGPPAGYRYYRSDNNCQKYFL-CIDGHPRVLYCGGESAFDDLTSTC 364
GF S L P +C L C +G + C F++ + C
Sbjct: 296 GF-MENYKASEALTPCTNMDNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLIC 352
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 2/116 (1%)
Frame = -2
Query: 669 CSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELG 493
CS F +C G+ + CP L FN C+WP V DC ++ C EV
Sbjct: 190 CSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEKSEKPQNCGEVD------ 243
Query: 492 PPAGYRYYRSDNNCQKYF-LCIDGHPRVLYCGGESAFDDLTSTCVSADEVGACPAE 328
Y S C F C +G P V++C F + C V C E
Sbjct: 244 ------GYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLE 293
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -2
Query: 654 NCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFR 526
+C NG F CP L FN + C++P+ C E L R
Sbjct: 328 SCQNGRENIFECPPSLVFNENSLICDYPETSLKCCMEDALLIR 370
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -2
Query: 660 FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAE 544
F CV+G CP+ L ++ C+W V +C E
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE 80
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/63 (39%), Positives = 30/63 (47%)
Frame = -2
Query: 741 LQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEV 562
L PQPT C GYF G S F C NG CP GL F+ T RC++ V
Sbjct: 302 LPTPQPT--CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNV 356
Query: 561 ADC 553
++C
Sbjct: 357 SEC 359
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/113 (30%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
Frame = -2
Query: 669 CS-GFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELG 493
CS F C G+ CP L FN C+WP +VA+C G P+ P E G
Sbjct: 260 CSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC-----AGLPTPQ-PTCEEDG 313
Query: 492 PPAGYRYYRSDNNCQKYF-LCIDGHPRVLYCGGESAFDDLTSTCVSADEVGAC 337
Y S C F C +G V++C F + T C V C
Sbjct: 314 -------YFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 32.3 bits (70), Expect = 0.37
Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 2/108 (1%)
Frame = -2
Query: 654 NCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYR 475
+C NG F CP L FN ++ C++P C E + E PI+ G
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKCLIEDTI--LIDETPIAAFDCSTDG-- 476
Query: 474 YYRSDNNCQ-KYFLCIDGHPRVLYCGGESA-FDDLTSTCVSADEVGAC 337
SD C Y C G C +A F + CV + + C
Sbjct: 477 -LFSDGLCSATYHQCTAGQLINFTCAASNAVFSAANTECVDSSTLLQC 523
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -2
Query: 699 GYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 550
G + LG+ F C G+ CP L +N C+W V C+
Sbjct: 30 GLYALGECE--PQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/63 (39%), Positives = 30/63 (47%)
Frame = -2
Query: 741 LQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEV 562
L PQPT C GYF G S F C NG CP GL F+ T RC++ V
Sbjct: 302 LPTPQPT--CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNV 356
Query: 561 ADC 553
++C
Sbjct: 357 SEC 359
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/113 (30%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
Frame = -2
Query: 669 CS-GFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELG 493
CS F C G+ CP L FN C+WP +VA+C G P+ P E G
Sbjct: 260 CSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC-----AGLPTPQ-PTCEEDG 313
Query: 492 PPAGYRYYRSDNNCQKYF-LCIDGHPRVLYCGGESAFDDLTSTCVSADEVGAC 337
Y S C F C +G V++C F + T C V C
Sbjct: 314 -------YFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 32.3 bits (70), Expect = 0.37
Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 2/108 (1%)
Frame = -2
Query: 654 NCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYR 475
+C NG F CP L FN ++ C++P C E + E PI+ G
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKCLIEDTI--LIDETPIAAFDCSTDG-- 476
Query: 474 YYRSDNNCQ-KYFLCIDGHPRVLYCGGESA-FDDLTSTCVSADEVGAC 337
SD C Y C G C +A F + CV + + C
Sbjct: 477 -LFSDGLCSATYHQCTAGQLINFTCAASNAVFSAANTECVDSSTLLQC 523
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -2
Query: 699 GYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 550
G + LG+ F C G+ CP L +N C+W V C+
Sbjct: 30 GLYALGECE--PQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -2
Query: 660 FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 553
++NCVNG F+C +GL F+ E RC D++A+C
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 699 GYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 553
G++ G+ CS + C NG CP LAF+ C++ V +C
Sbjct: 220 GFYSFGE---CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -2
Query: 660 FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 553
++NCVNG F+C +GL F+ E RC D++A+C
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 699 GYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 553
G++ G+ CS + C NG CP LAF+ C++ V +C
Sbjct: 220 GFYSFGE---CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 11/132 (8%)
Frame = -2
Query: 714 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEW---------PDEV 562
C ++ G F + + + F +C NGVG C D L F++ CE+ P++V
Sbjct: 353 CKNRDGIFGIKECH--ASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAICLEPRKPEDV 410
Query: 561 ADC-DAEAFLGFRCPEVPISRE-LGPPAGYRYYRSDNNCQKYFLCIDGHPRVLYCGGESA 388
+ R EV + + G P G Y + + +F C DG C G+
Sbjct: 411 PVLYNHGGAYNERPAEVKVDFDCTGKPNG--KYIKEACTKSFFTCHDGRAFANDCPGDLV 468
Query: 387 FDDLTSTCVSAD 352
F+ T TC A+
Sbjct: 469 FNKATGTCDFAE 480
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 741 LQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCE 577
L P P CP G + +G + S + CVN V Y+ CP+GL F+ RCE
Sbjct: 36 LNPKGPP--CPDGDGLYAVGCS---SKYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
Score = 34.7 bits (76), Expect = 0.070
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
Frame = -2
Query: 738 QPPQPTELCPHQFGYFKLGDARNCSG-----FRNCVNGVGYDFVCPDGLAFNSETYRCEW 574
Q P T + F L D + SG F C NG CP L FN C++
Sbjct: 560 QAPVTTTIALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVGECDY 619
Query: 573 PDEVADC 553
V DC
Sbjct: 620 STNVRDC 626
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 699 GYFKLGDARNCSGFR-NCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRC 523
GY+ G CS + +C++ CP+ L F+ E+ +C +P + +C L
Sbjct: 961 GYYSAG----CSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTP 1016
Query: 522 PEVP 511
P VP
Sbjct: 1017 PAVP 1020
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 681 DARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 553
D CS F C NG + CP+ L + + C++P+ V DC
Sbjct: 213 DNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/112 (24%), Positives = 38/112 (33%), Gaps = 1/112 (0%)
Frame = -2
Query: 669 CS-GFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELG 493
CS + C+ G C GL +N + C + V C +G + + G
Sbjct: 902 CSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCK----IGKGSDIIDSNACFG 957
Query: 492 PPAGYRYYRSDNNCQKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGAC 337
GY S YF CID R + C F + CV + C
Sbjct: 958 KSDGYY---SAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKEC 1006
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 672 NCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 553
+C+ F +N CP GL ++ RC++ + V DC
Sbjct: 806 SCNNFETTINR------CPAGLFYSKLNNRCDYKEHVEDC 839
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 627 FVCPDGLAFNSETYRCEWPDEVADC 553
F+C +GL F+ E RC D++A+C
Sbjct: 128 FICENGLFFSPEQARCAPADQIAEC 152
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -2
Query: 681 DARNCSGFRNCVNGVGYDFVCPDGLAF--NSETYRCEWP 571
D +C C G G +F+C F N T +CE P
Sbjct: 736 DVHSCPANSKCEKGAGGEFICKCDAGFQRNGRTNKCEAP 774
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -2
Query: 681 DARNCSGFRNCVNGVGYDFVCPDGLAF--NSETYRCEWP 571
D +C C G G +F+C F N T +CE P
Sbjct: 736 DVHSCPANSKCEKGAGGEFICKCDAGFQRNGRTNKCEAP 774
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = -2
Query: 459 NNCQKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADE---VGACPAE 328
N+C K+ CID HP +C F C DE G C E
Sbjct: 1865 NDCNKHAECIDIHPDSHFCSCPDGFIGDGMICDDVDECNNAGMCDDE 1911
>AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical
protein Y105E8A.7b protein.
Length = 840
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 456 NCQKYFLCIDGHPRVLYCGGESAF 385
+CQK + +DG PR YCG + F
Sbjct: 690 SCQKAVIRVDGGPRSEYCGTKREF 713
>AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical
protein Y105E8A.7a protein.
Length = 906
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 456 NCQKYFLCIDGHPRVLYCGGESAF 385
+CQK + +DG PR YCG + F
Sbjct: 690 SCQKAVIRVDGGPRSEYCGTKREF 713
>Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical
protein T23F11.6 protein.
Length = 187
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 537 LGFRCPEVPISRELGPPAGYRYYRSDNNCQKYFLC 433
L + CP S L PP +R + N+CQ ++C
Sbjct: 22 LSYACPPSLDSLNLPPPVIHRECLTRNSCQNGYIC 56
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 420 DAHRCTGNTSGNCCQTCSIYIRLGDQVLYLLVLRGNGIRGKLQHRSRRLHQAIRSGRSQN 599
D +C T C TC+I + G Q++ L + +R Q S H A +S +N
Sbjct: 184 DCSQCE-ETGRKICSTCAIRLHNGHQLVEKKALTSDDVREMKQKISDASHAAFQS--LEN 240
Query: 600 *KP 608
KP
Sbjct: 241 LKP 243
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 420 DAHRCTGNTSGNCCQTCSIYIRLGDQVLYLLVLRGNGIRGKLQHRSRRLHQAIRSGRSQN 599
D +C T C TC+I + G Q++ L + +R Q S H A +S +N
Sbjct: 184 DCSQCE-ETGRKICSTCAIRLHNGHQLVEKKALTSDDVREMKQKISDASHAAFQS--LEN 240
Query: 600 *KP 608
KP
Sbjct: 241 LKP 243
>AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical
protein ZK973.1 protein.
Length = 745
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 585 RCEWPDEVADCDAEAFLGFRCPEVPISRELG--PPA 484
RCE DEV D E G R + I+R LG PPA
Sbjct: 108 RCEEFDEVTDISKEYSTGTRKTKANIARALGLEPPA 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,056,933
Number of Sequences: 27780
Number of extensions: 332271
Number of successful extensions: 872
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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