Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o06f
(601 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 7e-13
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 43 2e-04
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 41 9e-04
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 38 0.008
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 37 0.014
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 36 0.025
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 35 0.044
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 35 0.044
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024) 32 0.31
SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_55021| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-45) 32 0.41
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05) 30 1.6
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 29 2.2
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 29 2.2
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09) 29 2.9
SB_14427| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.8
SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41) 29 3.8
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 28 6.6
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_47955| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_59400| Best HMM Match : UPF0160 (HMM E-Value=8.1) 27 8.8
SB_55855| Best HMM Match : Y_phosphatase (HMM E-Value=0.067) 27 8.8
SB_51456| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_22893| Best HMM Match : SWIM (HMM E-Value=0.99) 27 8.8
SB_19679| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 70.9 bits (166), Expect = 7e-13
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Frame = +3
Query: 204 NERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQP- 380
N +Y + +C+ ++ C NG CP LRY+P C++ + V C +R ++ P
Sbjct: 523 NGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKG----RCEWADTVDCGQRPTISPH 578
Query: 381 -PQPTELCPHQ------FGYFK----LGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETY 527
P+PT + P F K D NC+GF C NG Y CP L F+++
Sbjct: 579 PPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKL 638
Query: 528 RCEWPDEV 551
CEWP++V
Sbjct: 639 ECEWPNKV 646
Score = 68.9 bits (161), Expect = 3e-12
Identities = 45/134 (33%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Frame = +3
Query: 186 GQCRELNER-YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC-L 359
G C E ++ Y +C+ +I C N CP+ LR+NP C P V C
Sbjct: 441 GFCAERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKH----CDNPENVQCGP 496
Query: 360 ERSSLQPPQPTELCPHQFGYF-------KLGDARNCSGFRNCVNGVGYDFVCPDGLAFNS 518
R PT P F K DA NC+GF C NG Y CP L ++
Sbjct: 497 TRPPTPKVPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDP 556
Query: 519 ETYRCEWPDEVADC 560
RCEW D V DC
Sbjct: 557 AKGRCEWADTV-DC 569
Score = 62.1 bits (144), Expect = 3e-10
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +3
Query: 171 PVRPTGQCRELNE-RYPVSGSCDRYIECING-TAEEKLCPDGLRYNPNVNFDVYPCQYPN 344
P+ + C E + Y S +C+ YI C NG T + CP GL +N + C YP+
Sbjct: 309 PLVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGM----CDYPS 364
Query: 345 EVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSET 524
VP SS + C H+ D+ NC GF C NG Y CP F+
Sbjct: 365 NVPGCSGSS-----GSGFC-HEKSDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAK 418
Query: 525 YRCE 536
RCE
Sbjct: 419 KRCE 422
Score = 60.1 bits (139), Expect = 1e-09
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +3
Query: 192 CREL-NERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERS 368
C E N Y +C+ +I C NG A ++ CP L+++ C++PN+V C R
Sbjct: 597 CEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKK----LECEWPNKVNCKSRP 652
Query: 369 SLQP----PQP----TELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSET 524
+ P P P +E C G + D NC G+ C G Y C GL FN T
Sbjct: 653 TTVPYVTKPTPPSGNSEFCKKN-GNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVT 711
Query: 525 YRCEWPDEV 551
RC+ P V
Sbjct: 712 KRCDLPRNV 720
Score = 44.0 bits (99), Expect = 9e-05
Identities = 38/119 (31%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Frame = +3
Query: 171 PVRPTGQ---CREL-NERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQY 338
P P+G C++ N RY +C YI C G + C GLR+N C
Sbjct: 661 PTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVTK----RCDL 716
Query: 339 PNEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFN 515
P V C T + G + DA NC+GF C N + Y F CP L FN
Sbjct: 717 PRNVKCAGAGG-----GTFCEGRKDGDYV--DAVNCNGFIKCSNQLTYYFDCPSNLRFN 768
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 432 DARNCSGFRNCVNGVGY-DFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPE 596
D+ NC+ + C NG + CP GLAFN C++P V C + GF C E
Sbjct: 326 DSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNVPGCSGSSGSGF-CHE 380
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +3
Query: 339 PNEVPCLERSSLQPPQPTELCPHQFGYFKL----GDARNCSGFRNCVNGVGYDFVCPDGL 506
PN + C + ++ P + T +F K D ++CS + C G + CPDGL
Sbjct: 203 PNSIRCFGQGNIPPGKATPAEDEKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGL 262
Query: 507 AFNSETYRCEWPDEV 551
FN+ C+ P +V
Sbjct: 263 KFNALIKSCDEPSKV 277
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 231 CDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 365
C Y +C G + +K CPDGL++N + C P++V C+ +
Sbjct: 242 CSAYYQCKKGRSFKKFCPDGLKFNALIK----SCDEPSKVNCVTK 282
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 432 DARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEV 551
+ NC GF C G+ + CP GL FN++ C+W EV
Sbjct: 468 EKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEV 507
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 213 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 356
Y +C ++ C G A +K CP GL +N D+ C + +EV C
Sbjct: 466 YAEKENCYGFVLCGGGIAHKKTCPPGLIFNT----DLMVCDWSHEVKC 509
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +3
Query: 213 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 356
YP C YI C NG A E CP GL +N + C +P PC
Sbjct: 94 YPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKY----CDWPFNAPC 137
Score = 40.7 bits (91), Expect = 9e-04
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 444 CSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWP 542
C + C NG+ Y+ CP GL +N E C+WP
Sbjct: 100 CKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWP 132
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 444 CSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
C GF +C N CP GL +N +T +C+WP V DC
Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNV-DC 128
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 228 SCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 356
+C +I C N A K CP GL YN C +P V C
Sbjct: 90 ACRGFIHCHNYNASYKPCPGGLLYNEKTK----QCDWPRNVDC 128
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/79 (34%), Positives = 35/79 (44%)
Frame = +3
Query: 117 YQPFGQTNRFQNQYQEQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLR 296
Y P+ +TN + P RP CRE +Y R+ C TAE +CP G
Sbjct: 2988 YCPYNETNI------DGIPCRPKYFCRE-GAKYETYCPAGRF--CNYTTAEPYICPGG-H 3037
Query: 297 YNPNVNFDVYPCQYPNEVP 353
Y PN + PC+YP P
Sbjct: 3038 YCPNGSDTYTPCEYPYYCP 3056
Score = 31.1 bits (67), Expect = 0.71
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = +3
Query: 249 CINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKL 428
C +G+ + PDG Y P V + PC+ + P ++ L P T + + G +
Sbjct: 2820 CKSGSPDPN--PDG--YWPPV--EAGPCKMGHYCPKGTQAPLPCPDNT-MKNYTGGAGTV 2872
Query: 429 GDARNCSGFRNCVNGVGYDFVCPDG 503
D C R CVNG + CP G
Sbjct: 2873 DDCTPCPAGRYCVNGTAFGVPCPPG 2897
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 384 QPT-ELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDG 503
QPT + CP GY+ DA+ C C GV +CP+G
Sbjct: 2742 QPTCDPCPA--GYYCDPDAKKCPSHNYCPAGVTVPILCPNG 2780
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 195 RELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 365
+ N Y +C YI C N E+ CP GL +N + C +P PC E+
Sbjct: 64 KRANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKW----CDWPKNAPCEEK 116
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 441 NCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 563
NC + C N + Y+ CP GL +N C+WP A C+
Sbjct: 75 NCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKN-APCE 114
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +3
Query: 213 YPVSGSCDRYIECINGTAEEKLCPDGLRYN 302
Y CD YI C NG A E CP GL +N
Sbjct: 344 YAHPSKCDMYITCSNGIAHEMPCPAGLNWN 373
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 444 CSGFRNCVNGVGYDFVCPDGLAFNSETYRCE 536
C + C NG+ ++ CP GL +N T C+
Sbjct: 350 CDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 432 DARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDE 548
D +N S F C NGV + C GL FN + CE PD+
Sbjct: 17 DEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQ 55
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +3
Query: 237 RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQ---YPNEVPCLERSSLQPPQPTELCPH 407
+++ C NG EE+ C GL +NP P Q P +V + +P+ +
Sbjct: 23 KFVICYNGVREERECAKGLVFNPKEKICEQPDQRYTKPKKVGRKSKLVENAQEPSHMAER 82
Query: 408 QFGYFKL 428
+FK+
Sbjct: 83 MKEFFKI 89
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 35.1 bits (77), Expect = 0.044
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 432 DARNCSGFRNC-VNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 563
D RNCS F C + CP GL ++ C+WP V DCD
Sbjct: 125 DPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV-DCD 168
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 35.1 bits (77), Expect = 0.044
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 432 DARNCSGFRNC-VNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 563
D RNCS F C + CP GL ++ C+WP V DCD
Sbjct: 32 DPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV-DCD 75
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 432 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 563
D R+CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 1148 DPRDCSRFYQC-DAFHKTFLHRCPAGLKWSVKKTACDWPRYV-DCD 1191
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 432 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 563
D R+CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 898 DPRDCSKFYQC-DAFHRAFLHRCPAGLKWSVKKTACDWPRYV-DCD 941
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 432 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 563
D R+CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 1248 DPRDCSRFYQC-DAFHRAFLHRCPAGLKWSVKKTACDWPRYV-DCD 1291
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 432 DARNCSGFRNC-VNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 563
D R+CS F C + + CPDGL ++ + C+ P V DCD
Sbjct: 1353 DPRDCSRFYQCDASHKTFLHRCPDGLKWSVKKTACDLPLYV-DCD 1396
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 432 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 563
D +CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 1003 DPMDCSRFYQC-DAFHRAFLHRCPAGLKWSVKKTTCDWPRYV-DCD 1046
>SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024)
Length = 1213
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -3
Query: 203 QFPALSSRPDGCLFLVLILEAICLSKRLVLCLCVNKGAKARQDHKS 66
QF SS PD L ++L+ A+ + ++ C C+ GA+ R+ +S
Sbjct: 955 QFITKSSMPDSTLIIILVSVAVGVILLVLACCCLCCGARRRRRRRS 1000
>SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1604
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 189 QCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 353
+CR+ + ++P + + YIEC N + CPD + + N + CQ P +P
Sbjct: 419 ECRKPSGKFPDPSNINGYIECKNNIPKRVDCPD---VHQHWNDTLKTCQDPPAIP 470
>SB_55021| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-45)
Length = 348
Score = 31.9 bits (69), Expect = 0.41
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 462 CVNGVG-YDFVCPDGLAFNSETYRCEWPDEVADCD 563
C+N G Y CP G+++N T CE DE A D
Sbjct: 127 CINTPGSYKCECPSGMSYNHGTGTCEDKDECASPD 161
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.1 bits (67), Expect = 0.71
Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 13/146 (8%)
Frame = +3
Query: 165 QAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPN 344
Q PVR G + R CD EC+NGT E + G + D PC PN
Sbjct: 368 QCPVRYMG----IRCRVDKCDRCDLNAECLNGTCECRSGFVGNGFKCTATED--PC-IPN 420
Query: 345 EVPCLERSSLQPPQPTEL----CPHQFGYFKLGDARNCSGFRNCVN-GVGYDF-----VC 494
PC +P ++ CP F + ++ R C+N G+ D
Sbjct: 421 --PCENGGICRPGHGGKVFDCSCPSGFDGMRCEVTKSACKARPCLNGGICVDLTNDNGTL 478
Query: 495 PDGLAF-NSETYRCEWPDEVA--DCD 563
DG+ F N+ +RC P A +CD
Sbjct: 479 LDGVIFLNTSDFRCVCPKGYAGINCD 504
>SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 432 DARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
D C G+ +CV+G Y CP G + + C P +DC
Sbjct: 182 DTSRCDGYVSCVSGYIYYMPCPAGTQWKNAEDACVDP-SASDC 223
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 213 YPVSGSCDRYIECINGTAEEKLCPDGLRY 299
YP + CD Y+ C++G CP G ++
Sbjct: 180 YPDTSRCDGYVSCVSGYIYYMPCPAGTQW 208
>SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 399 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWP 542
C G F D N +G+ +CV+GVG C DGL + ++ C+ P
Sbjct: 172 CKSPDGMF--ADPYNEAGYIHCVSGVGKRVNCGDGLVWEKKS--CQKP 215
>SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05)
Length = 278
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 180 PTGQCRELNERYPVSG-SCDRYIECINGTAEEKLCPDGLRYNPNVNFD-VYPCQYPNEVP 353
P +L P+ +CD Y+E I AE + D ++ NP + D + C + E
Sbjct: 41 PNFSAHKLKSMVPLMNKACDVYMEKITRAAETRATIDVMKINPALTLDIIISCAFGVESD 100
Query: 354 C 356
C
Sbjct: 101 C 101
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 327 PCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKL 428
P + N + L RSS PPQP L HQ+ KL
Sbjct: 855 PYEVENSLGHLVRSSRVPPQPLMLSRHQYNLRKL 888
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2
Query: 582 IRGKLQHRSRRLHQAIRSGRSQN*KPVRRDIQNRSLHRSRSF*IRCNCGRR 430
IR KL+HR + + R RS+ K +RR ++ R RSR GRR
Sbjct: 1837 IRRKLRHRRQVNRRRRRRQRSRRRKAIRRILRRRFGRRSRRINRHGRLGRR 1887
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 462 CVNGVG-YDFVCPDGLAFNSETYRCEWPDEVAD 557
C N +G Y VCPDG+ + CE +E +D
Sbjct: 188 CYNTMGSYKCVCPDGMELMKDGVSCEDKNECSD 220
>SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09)
Length = 438
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +1
Query: 88 FAPLFTHKHSTSLLDRQIASKISTRNKHPSGLLDNAGN*TKGIQCPEAATDILNASMEPL 267
FAP T +H+ + + + I+TR + +G + +GN + I P ++ ++ P
Sbjct: 122 FAPGVTGRHAVNFQKKSPSGNINTRKPYKTGNIHLSGNDSDSI--PSTSSQSFTETLSPR 179
Query: 268 KRNYAPMVSVT 300
+ P +T
Sbjct: 180 RDQKQPREYIT 190
>SB_14427| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2325
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 171 PVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPD 287
P RP G+C +L Y + CD C+ GT K C D
Sbjct: 2209 PCRPGGECTDLVNNYTCAYFCDD-DPCVPGTT--KFCSD 2244
>SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41)
Length = 653
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 459 NCVNGVG-YDFVCPDGLAFNSETYRCEWPDEVAD 557
NC N +G Y CP G + N+E +C DE A+
Sbjct: 468 NCKNTLGSYKCQCPLGYSMNNEMKKCVDRDECAE 501
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 331 ASTLTKCR--VSNDPRYSHRNRQNCVPINSDTSN*ATPAIAADSETA*TV*ATILYVPTD 504
A+TL R + RY HRN NC I+ ++S+ P+ A + + AT+L P +
Sbjct: 66 AATLWSRRPLICRSRRYRHRNGHNC-SISRNSSSEICPSCRALETSLSSCLATLLVRPLE 124
Query: 505 WLSILRPT 528
+ PT
Sbjct: 125 TIPAPAPT 132
>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 27.9 bits (59), Expect = 6.6
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
Frame = +3
Query: 192 CRELNERYPVSGSCDRYIECINGTAEEK-LCPDGLRYNPNVNFDVYPCQYPNEVPCLERS 368
C +++E +CD+ +C N +C G + D+ C + C + +
Sbjct: 276 CTDIDECVTGDHTCDKNAKCNNTIGSYHCMCNPGFSGDGRECTDIDEC-VTGDHTCDKNA 334
Query: 369 SLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSE--TYRC 533
+ C G+ GD RNC+ CV G D C N+ +Y C
Sbjct: 335 KCNNIIGSYHCTCNPGFS--GDGRNCTDIDECVTG---DHTCDKNAKCNNTIGSYHC 386
Score = 27.9 bits (59), Expect = 6.6
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
Frame = +3
Query: 192 CRELNERYPVSGSCDRYIECINGTAEEK-LCPDGLRYNPNVNFDVYPCQYPNEVPCLERS 368
C +++E +CD+ +C N +C G + D+ C + C + +
Sbjct: 399 CTDIDECVTGDHTCDKNAKCNNTIGSYHCMCNPGFSGDGRECTDIDEC-VTGDHTCDKNA 457
Query: 369 SLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSE--TYRC 533
+ C G+ GD RNC+ CV G D C N+ +Y C
Sbjct: 458 KCNNIIGSYHCTCNPGFS--GDGRNCTDIDECVTG---DHTCDKNAKCNNTIGSYHC 509
>SB_47955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 245 NISVAASGHWIPFVQFPALSSRPDGCLFL 159
N +V SG W+ FP L + PDG +F+
Sbjct: 20 NATVNESGLWV-HADFPYLGASPDGLIFV 47
>SB_59400| Best HMM Match : UPF0160 (HMM E-Value=8.1)
Length = 337
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 245 NISVAASGHWIPFVQFPALSSRPDGCLFL 159
N +V SG W+ FP L + PDG +F+
Sbjct: 214 NATVNESGLWV-HADFPYLGASPDGLIFV 241
>SB_55855| Best HMM Match : Y_phosphatase (HMM E-Value=0.067)
Length = 319
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -3
Query: 203 QFPALSSRPDGCLFLVLILEAICLSKRLVLCLCVNKGAKARQDHKS 66
QF SS PD L ++L+ A+ + LVL C K A ++ KS
Sbjct: 60 QFITKSSMPDSTLIIILVSVAVGVI-LLVLACCCAKEAPPTEEVKS 104
>SB_51456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 245 NISVAASGHWIPFVQFPALSSRPDGCLFL 159
N +V SG W+ FP L + PDG +F+
Sbjct: 41 NATVNESGLWV-HADFPYLGASPDGLIFV 68
>SB_22893| Best HMM Match : SWIM (HMM E-Value=0.99)
Length = 461
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 245 NISVAASGHWIPFVQFPALSSRPDGCLFL 159
N +V SG W+ FP L + PDG +F+
Sbjct: 304 NATVNESGLWV-HADFPYLGASPDGLIFV 331
>SB_19679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 245 NISVAASGHWIPFVQFPALSSRPDGCLFL 159
N +V SG W+ FP L + PDG +F+
Sbjct: 405 NATVNESGLWV-HADFPYLGASPDGLIFV 432
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,570,294
Number of Sequences: 59808
Number of extensions: 471582
Number of successful extensions: 1610
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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