Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o06f
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 66 1e-11
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 64 6e-11
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 64 6e-11
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 61 7e-10
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 42 3e-04
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 42 3e-04
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 40 0.001
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.48
AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical ... 30 1.5
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 29 1.9
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 29 1.9
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 29 3.3
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 29 3.3
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 29 3.3
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 28 4.4
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 28 4.4
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 28 4.4
AF098497-2|AAC64978.1| 144|Caenorhabditis elegans Hypothetical ... 28 5.9
U40421-1|AAA81437.2| 178|Caenorhabditis elegans Helix loop heli... 27 7.7
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 27 7.7
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 27 7.7
AF037063-1|AAC26105.1| 178|Caenorhabditis elegans twist protein. 27 7.7
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 66.5 bits (155), Expect = 1e-11
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Frame = +3
Query: 117 YQPFGQTNRFQNQYQEQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLR 296
Y P + ++ E + V +G+ E + S + + C G A + CP L
Sbjct: 155 YDPTNKKCSWKGMIDECSQV--SGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANLV 212
Query: 297 YNPNVNFDVYPCQYP-NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNG 473
+NP ++ C +P N + C E+S + PQ C GYF G R S F C NG
Sbjct: 213 FNPAIS----SCDWPKNVMDCSEKS--EKPQN---CGEVDGYFSFG--RCSSSFSACTNG 261
Query: 474 VGYDFVCPDGLAFNSETYRCEWPDEVADCDAEA 572
+ CPDGL F+ + C++ V +CD E+
Sbjct: 262 IPIVMFCPDGLMFSEKNQMCDYEWNVDECDLES 294
Score = 44.8 bits (101), Expect = 5e-05
Identities = 37/138 (26%), Positives = 52/138 (37%), Gaps = 2/138 (1%)
Frame = +3
Query: 192 CRELNERYPVSGSCDR-YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP-CLER 365
C L + SG+C YI C +G+ C L Y+P C + + C +
Sbjct: 119 CESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNK----KCSWKGMIDECSQV 174
Query: 366 SSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPD 545
S E C G + N F +C G+ + CP L FN C+WP
Sbjct: 175 SG-------EYCESD-GNISKSECSNV--FFSCSEGIAHRRNCPANLVFNPAISSCDWPK 224
Query: 546 EVADCDAEAFLGFRCPEV 599
V DC ++ C EV
Sbjct: 225 NVMDCSEKSEKPQNCGEV 242
Score = 37.1 bits (82), Expect = 0.010
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 4/136 (2%)
Frame = +3
Query: 192 CRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYP-NEVPC-LER 365
C E++ + + C NG CPDGL ++ C Y N C LE
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQM----CDYEWNVDECDLES 294
Query: 366 SS-LQPPQPTELCPHQFGYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEW 539
S ++ + +E A +C+ +C NG F CP L FN + C++
Sbjct: 295 SGFMENYKASEALTPCTNMDNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDY 354
Query: 540 PDEVADCDAEAFLGFR 587
P+ C E L R
Sbjct: 355 PETSLKCCMEDALLIR 370
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 213 YPVSGSCD-RYIECINGTAEEKLCPDGLRYNPNVNF 317
YP+ G+C+ R++ C++G A CP+ L Y+ N+ F
Sbjct: 33 YPL-GACEPRFLACVSGEARYMDCPEDLVYHKNLEF 67
Score = 30.7 bits (66), Expect = 0.83
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 453 FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAE 569
F CV+G CP+ L ++ C+W V +C E
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE 80
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 64.5 bits (150), Expect = 6e-11
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +3
Query: 222 SGSCD-RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTEL 398
+G C ++ C G A CP L +NP + C +P +V E + L PQPT
Sbjct: 257 NGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVA--ECAGLPTPQPT-- 308
Query: 399 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
C GYF G S F C NG CP GL F+ T RC++ V++C
Sbjct: 309 CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 31.1 bits (67), Expect = 0.63
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 459 NCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
+C NG F CP L FN ++ C++P C
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +3
Query: 414 GYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 563
G + LG+ F C G+ CP L +N C+W V C+
Sbjct: 30 GLYALGECE--PQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 28.3 bits (60), Expect = 4.4
Identities = 30/136 (22%), Positives = 45/136 (33%), Gaps = 3/136 (2%)
Frame = +3
Query: 162 EQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYP 341
E + V QC L+ G R + C NG + CP L +N C YP
Sbjct: 393 EGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLI----CDYP 448
Query: 342 -NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSG-FRNCVNGVGYDFVC-PDGLAF 512
+ CL ++ + T + L CS + C G +F C F
Sbjct: 449 QTSLKCLIEDTILIDE-TPIAAFDCSTDGLFSDGLCSATYHQCTAGQLINFTCAASNAVF 507
Query: 513 NSETYRCEWPDEVADC 560
++ C + C
Sbjct: 508 SAANTECVDSSTLLQC 523
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 64.5 bits (150), Expect = 6e-11
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +3
Query: 222 SGSCD-RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTEL 398
+G C ++ C G A CP L +NP + C +P +V E + L PQPT
Sbjct: 257 NGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVA--ECAGLPTPQPT-- 308
Query: 399 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
C GYF G S F C NG CP GL F+ T RC++ V++C
Sbjct: 309 CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 31.1 bits (67), Expect = 0.63
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 459 NCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
+C NG F CP L FN ++ C++P C
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +3
Query: 414 GYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 563
G + LG+ F C G+ CP L +N C+W V C+
Sbjct: 30 GLYALGECE--PQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 28.3 bits (60), Expect = 4.4
Identities = 30/136 (22%), Positives = 45/136 (33%), Gaps = 3/136 (2%)
Frame = +3
Query: 162 EQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYP 341
E + V QC L+ G R + C NG + CP L +N C YP
Sbjct: 393 EGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLI----CDYP 448
Query: 342 -NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSG-FRNCVNGVGYDFVC-PDGLAF 512
+ CL ++ + T + L CS + C G +F C F
Sbjct: 449 QTSLKCLIEDTILIDE-TPIAAFDCSTDGLFSDGLCSATYHQCTAGQLINFTCAASNAVF 507
Query: 513 NSETYRCEWPDEVADC 560
++ C + C
Sbjct: 508 SAANTECVDSSTLLQC 523
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 60.9 bits (141), Expect = 7e-10
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Frame = +3
Query: 213 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVY-------------PCQYPNEVP 353
YP S +C ++ C++ + CP GL+Y+ ++ + P P
Sbjct: 489 YPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVTTTRAPTTTTKSAP 548
Query: 354 CLERSSLQPPQPTEL--CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETY 527
+ ++ P T C G+F G +C F CVNG+ Y+F CP+GL+F+++T
Sbjct: 549 TVTTTTRAPTTTTPAFKCTKD-GFF--GVPSDCLKFIRCVNGISYNFECPNGLSFHADTM 605
Query: 528 RCEWPD 545
C+ PD
Sbjct: 606 MCDRPD 611
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/115 (30%), Positives = 43/115 (37%), Gaps = 1/115 (0%)
Frame = +3
Query: 231 CDRYIECINGTA-EEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELCPH 407
C ++C G E C L +N C YP +V E Q C
Sbjct: 1196 CSAILQCFGGELFEHPSCQSSLAFNQLTG----KCDYPQKVSGCENHG----QTNGECS- 1246
Query: 408 QFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEA 572
+ G F + DA NC F CV G CP G FN C+WP V C +A
Sbjct: 1247 EHGSF-IADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQA 1300
Score = 44.0 bits (99), Expect = 8e-05
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 11/154 (7%)
Frame = +3
Query: 168 APVRPT---GQCRELNERYPVS-GSCD-RYIECINGTAEEKLCPDGLRYNPN-----VNF 317
AP +P G+C ++ S G C +Y+ C G ++ + C + ++ + V
Sbjct: 1097 APAQPKQFEGRCAHVDGEAVFSIGVCSSKYLRCSYGASKLQQCSEDRVFSNDKLECIVRE 1156
Query: 318 DVYPCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFV-C 494
V C P P +++ Q + G ++ + R+CS C G ++ C
Sbjct: 1157 SVSACTVPKN-PSIKKYYTSNDQSAFCDGKEDGLYR--NERDCSAILQCFGGELFEHPSC 1213
Query: 495 PDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPE 596
LAFN T +C++P +V+ C+ C E
Sbjct: 1214 QSSLAFNQLTGKCDYPQKVSGCENHGQTNGECSE 1247
Score = 36.7 bits (81), Expect = 0.013
Identities = 34/113 (30%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Frame = +3
Query: 228 SCDR-YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQ--PPQPTEL 398
+C R Y C+NG + C D + + + P E E + P +
Sbjct: 43 ACSREYSICVNGVRQAATCSDDSVFYED---ECVPVDESPECRVDENTEEDDTPYAEFDC 99
Query: 399 CPHQFGYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRC-EWPDEV 551
Q G + +G CS F +CV G Y CPD L FN T C E DEV
Sbjct: 100 TSKQDGIYSIG----CSNQFISCVAGGAYMAKCPDSLVFNERTQDCRESCDEV 148
Score = 36.7 bits (81), Expect = 0.013
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 303 PNVNFDVYPCQYP-NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVG 479
PN +++ Y QY N+VP S+ P G F LG ++ + C NG
Sbjct: 665 PN-SYESYTTQYSSNDVP----STSAAPIGDRCSLDASGLFSLGCSQK---YIQCSNGAA 716
Query: 480 YDFVCPDGLAFNSETYRCEWPDEVADCDAE 569
C + L FN T C + DEV +C ++
Sbjct: 717 IVRRCGESLYFNEATQECTYRDEVPECGSQ 746
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 186 GQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 353
G+C E + +C+ + C+ G CP G +NP ++ C +P+ VP
Sbjct: 1243 GECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSV----CDWPSAVP 1294
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 225 GSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP-CLERSSLQPP 383
G +YI+C NG A + C + L +N C Y +EVP C + S P
Sbjct: 703 GCSQKYIQCSNGAAIVRRCGESLYFNEATQ----ECTYRDEVPECGSQGSTSSP 752
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = +3
Query: 144 FQNQYQEQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDV 323
++ Q + P C L + G D + C N ++ CP G +N N
Sbjct: 177 YERQPSNEQPDSIDFDCNGLEDGNYADGCNDVFYSCSNNMVFQRYCPPGTVFNINQQSCD 236
Query: 324 YPC--QYPNEVPCLERSSLQPPQ 386
+ C P S++ PQ
Sbjct: 237 FQCTTDDPTTTVSYSTSTITTPQ 259
Score = 28.7 bits (61), Expect = 3.3
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 9/143 (6%)
Frame = +3
Query: 159 QEQAPVRPTGQCRELNERYPVSGSCDR-YIECINGTAEEKLCPDGLRYNPNVNFDV--YP 329
+E+ V +C + R PV G C R Y+EC + EKLC G ++ + N V
Sbjct: 1021 EEEDDVEHDQKCT-VGSRTPV-GFCVRTYLECTDAGNVEKLCRIGKLFDSHSNRCVPRIG 1078
Query: 330 C---QYPNEVPCLERSSLQPPQPTEL---CPHQFGYFKLGDARNCSGFRNCVNGVGYDFV 491
C + + + ++ P QP + C H G S + C G
Sbjct: 1079 CGKEAIRDAIKDMIATTPAPAQPKQFEGRCAHVDGEAVFSIGVCSSKYLRCSYGASKLQQ 1138
Query: 492 CPDGLAFNSETYRCEWPDEVADC 560
C + F+++ C + V+ C
Sbjct: 1139 CSEDRVFSNDKLECIVRESVSAC 1161
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 453 FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
++NCVNG F+C +GL F+ E RC D++A+C
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 213 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 353
Y + G +++ C G + CP L Y+P + C+Y VP
Sbjct: 69 YAIGGCSPQFLTCSGGISRIMDCPADLIYDPR----IVACEYSYNVP 111
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 414 GYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
G++ G+ CS + C NG CP LAF+ C++ V +C
Sbjct: 220 GFYSFGE---CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 453 FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
++NCVNG F+C +GL F+ E RC D++A+C
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 213 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 353
Y + G +++ C G + CP L Y+P + C+Y VP
Sbjct: 69 YAIGGCSPQFLTCSGGISRIMDCPADLIYDPR----IVACEYSYNVP 111
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 414 GYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
G++ G+ CS + C NG CP LAF+ C++ V +C
Sbjct: 220 GFYSFGE---CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 1/124 (0%)
Frame = +3
Query: 192 CRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSS 371
C ++ Y +G Y CI+ + CP+ L+++ V+P
Sbjct: 955 CFGKSDGYYSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDR 1014
Query: 372 LQPPQPTELCPHQFGYFKLGDARNCS-GFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDE 548
P P++ C + L + CS + C NG + C L +N +T C +
Sbjct: 1015 TPPAVPSDFCTIRSN--GLHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKST 1072
Query: 549 VADC 560
DC
Sbjct: 1073 NKDC 1076
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Frame = +3
Query: 240 YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELC-PHQFG 416
Y++C+ G + C GL YN C Y + V + + C G
Sbjct: 906 YVQCMQGRSLISSCAPGLFYNEKNGM----CAYKHTVDTCKIGKGSDIIDSNACFGKSDG 961
Query: 417 YFKLGDARNCSGFR-NCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCP 593
Y+ G CS + +C++ CP+ L F+ E+ +C +P + +C L P
Sbjct: 962 YYSAG----CSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPP 1017
Query: 594 EV 599
V
Sbjct: 1018 AV 1019
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 363 RSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCE 536
++ L P P CP G + +G + S + CVN V Y+ CP+GL F+ RCE
Sbjct: 33 KNVLNPKGPP--CPDGDGLYAVGCS---SKYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
Score = 34.7 bits (76), Expect = 0.051
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
Frame = +3
Query: 375 QPPQPTELCPHQFGYFKLGDARNCSG-----FRNCVNGVGYDFVCPDGLAFNSETYRCEW 539
Q P T + F L D + SG F C NG CP L FN C++
Sbjct: 560 QAPVTTTIALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVGECDY 619
Query: 540 PDEVADC 560
V DC
Sbjct: 620 STNVRDC 626
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 399 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEW 539
C ++ G F + + + F +C NGVG C D L F++ CE+
Sbjct: 353 CKNRDGIFGIKECH--ASFLSCDNGVGRVIQCADNLVFDTRVSACEF 397
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 174 VRPTGQ-CRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYN 302
+ P G C + + Y V G +Y++C+N E+ CP+GL ++
Sbjct: 36 LNPKGPPCPDGDGLYAV-GCSSKYLQCVNNVEYEQSCPEGLYFD 78
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 432 DARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
D CS F C NG + CP+ L + + C++P+ V DC
Sbjct: 213 DNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 30.7 bits (66), Expect = 0.83
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Frame = +3
Query: 156 YQEQAPVRPT-----GQCRELNERYPVSGSCDR-YIECINGTAEEKLCPDGLRYNPNVNF 317
Y QAPV T C+ L + SG C + C NG CP L +NP V
Sbjct: 557 YTTQAPVTTTIALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVG- 615
Query: 318 DVYPCQYPNEV 350
C Y V
Sbjct: 616 ---ECDYSTNV 623
Score = 28.7 bits (61), Expect = 3.3
Identities = 28/131 (21%), Positives = 50/131 (38%), Gaps = 11/131 (8%)
Frame = +3
Query: 186 GQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPC-----QYPNEV 350
G C+ + + + ++ C NG C D L ++ V+ + + P +V
Sbjct: 351 GDCKNRDGIFGIKECHASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAICLEPRKPEDV 410
Query: 351 PCL-ERSSLQPPQPTEL-----CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAF 512
P L +P E+ C + + +A S F C +G + CP L F
Sbjct: 411 PVLYNHGGAYNERPAEVKVDFDCTGKPNGKYIKEACTKSFF-TCHDGRAFANDCPGDLVF 469
Query: 513 NSETYRCEWPD 545
N T C++ +
Sbjct: 470 NKATGTCDFAE 480
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 441 NCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 560
+C+ F +N CP GL ++ RC++ + V DC
Sbjct: 806 SCNNFETTINR------CPAGLFYSKLNNRCDYKEHVEDC 839
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.007
Identities = 33/116 (28%), Positives = 49/116 (42%)
Frame = +3
Query: 165 QAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPN 344
QAP P GQ +L+ S R ++C+ GT++ +C G +N Y C N
Sbjct: 91 QAPTCPNGQLPKLD-------SSLRPLQCLPGTSQHLIC--GANHNCFFTGLNYMCCPSN 141
Query: 345 EVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAF 512
E + S P+ T L PH AR+C G VG ++C + +F
Sbjct: 142 EPSIDNQPSCPYPKLTVLDPHGLPMKCSQIARSCPGENMHCADVGLGYICCEDPSF 197
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 31.5 bits (68), Expect = 0.48
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 486 FVCPDGLAFNSETYRCEWPDEVADC 560
F+C +GL F+ E RC D++A+C
Sbjct: 128 FICENGLFFSPEQARCAPADQIAEC 152
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 213 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 353
Y + G +++ C G + CP L Y+P + C+Y VP
Sbjct: 69 YAIGGCSPQFLTCSGGISRIMDCPADLIYDPR----IVACEYSYNVP 111
>AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical
protein T27C4.2 protein.
Length = 643
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +3
Query: 174 VRPTGQCRELNERYPVSGSCDR---YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPN 344
V PT + VSG+ R +++ +GT P L +N Q +
Sbjct: 183 VSPTSTVYRMETDLSVSGNAIRNEPHVKVKSGTRHSTDSPINLEKAEEIN---KTNQVTS 239
Query: 345 EVPCLERSSLQPPQPTELCPHQ 410
P +++SS +PPQPT P +
Sbjct: 240 LAPKVQKSSTEPPQPTTTVPQE 261
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +3
Query: 432 DARNCSGFRNCVNGVGYDFVCPDGLAF--NSETYRCEWP 542
D +C C G G +F+C F N T +CE P
Sbjct: 736 DVHSCPANSKCEKGAGGEFICKCDAGFQRNGRTNKCEAP 774
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +3
Query: 432 DARNCSGFRNCVNGVGYDFVCPDGLAF--NSETYRCEWP 542
D +C C G G +F+C F N T +CE P
Sbjct: 736 DVHSCPANSKCEKGAGGEFICKCDAGFQRNGRTNKCEAP 774
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 351 PCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNC---VNGVGY 482
PCL +L PP E CP +FG FK D R C +GV Y
Sbjct: 154 PCLYGLTL-PPH-CEFCPSRFGAFKRADIRGRWAHAICALYTHGVNY 198
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 189 QCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 356
QC +LN PV + I+ G +K CPDG + NP+ + + C E+ C
Sbjct: 443 QCLQLN---PVLSNKTVPIKATAGLCSDK-CPDGYQINPDDHRECRKCVGKCEIVC 494
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 189 QCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 356
QC +LN PV + I+ G +K CPDG + NP+ + + C E+ C
Sbjct: 440 QCLQLN---PVLSNKTVPIKATAGLCSDK-CPDGYQINPDDHRECRKCVGKCEIVC 491
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +3
Query: 186 GQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 365
G+C +++E CDR C+N K C Y + Y + + C +
Sbjct: 195 GECIDIDECRGYKAVCDRNAWCVNEIGSYK-CECMASYRGDGKHCTYVGLGRSSIDCKD- 252
Query: 366 SSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCV 467
S+ +C + GY GD NC+ C+
Sbjct: 253 CSMHATCMNGVCQCKEGY--EGDGFNCTDVNECL 284
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +3
Query: 186 GQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 365
G+C +++E CDR C+N K C Y + Y + + C +
Sbjct: 195 GECIDIDECRGYKAVCDRNAWCVNEIGSYK-CECMASYRGDGKHCTYVGLGRSSIDCKD- 252
Query: 366 SSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCV 467
S+ +C + GY GD NC+ C+
Sbjct: 253 CSMHATCMNGVCQCKEGY--EGDGFNCTDVNECL 284
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +3
Query: 186 GQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 365
G+C +++E CDR C+N K C Y + Y + + C +
Sbjct: 195 GECIDIDECRGYKAVCDRNAWCVNEIGSYK-CECMASYRGDGKHCTYVGLGRSSIDCKD- 252
Query: 366 SSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCV 467
S+ +C + GY GD NC+ C+
Sbjct: 253 CSMHATCMNGVCQCKEGY--EGDGFNCTDVNECL 284
>AF098497-2|AAC64978.1| 144|Caenorhabditis elegans Hypothetical
protein B0294.1 protein.
Length = 144
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 LTCFCAFVYTQTQYQPFGQ-TNRFQNQYQEQAPVRPTGQCRELNE 209
L+CF F Y Q FG N QNQ+++Q + G C+ + +
Sbjct: 57 LSCFAMF-YPSEQISSFGGIANIPQNQHRKQELAKADGTCQRMEK 100
>U40421-1|AAA81437.2| 178|Caenorhabditis elegans Helix loop helix
protein 8 protein.
Length = 178
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 327 PCQYPNEVPCLERSSLQPPQPTELCPH 407
P P+++P L+ + + PP P+ + PH
Sbjct: 110 PIAGPSQLPPLQSAHIPPPAPSSIPPH 136
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (mixed
lineage kinase)homolog protein 1, isoform a protein.
Length = 1040
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Frame = +3
Query: 186 GQCRELNER---YPVSGSCDRYIECINGTAEEKLCPD--GLRYNPNVNFDVYPCQYPNEV 350
G R +N+ YPV G CD YI + T + + Y+ N+ Q P +
Sbjct: 863 GHGRSINQSTQYYPVGGGCDDYIPIVQKTVIKPTVGEVGNSPYSENIRCATRNVQNPQYI 922
Query: 351 PC 356
C
Sbjct: 923 QC 924
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Frame = +3
Query: 186 GQCRELNER---YPVSGSCDRYIECINGTAEEKLCPD--GLRYNPNVNFDVYPCQYPNEV 350
G R +N+ YPV G CD YI + T + + Y+ N+ Q P +
Sbjct: 801 GHGRSINQSTQYYPVGGGCDDYIPIVQKTVIKPTVGEVGNSPYSENIRCATRNVQNPQYI 860
Query: 351 PC 356
C
Sbjct: 861 QC 862
>AF037063-1|AAC26105.1| 178|Caenorhabditis elegans twist protein.
Length = 178
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 327 PCQYPNEVPCLERSSLQPPQPTELCPH 407
P P+++P L+ + + PP P+ + PH
Sbjct: 110 PIAGPSQLPPLQSAHIPPPAPSSIPPH 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,872,382
Number of Sequences: 27780
Number of extensions: 347316
Number of successful extensions: 1239
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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