Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o05r
(459 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 217 4e-57
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 215 2e-56
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 215 2e-56
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 215 2e-56
BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p pro... 69 3e-12
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 36 0.020
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 36 0.020
AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p pro... 30 1.3
AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA... 30 1.3
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 29 2.3
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 29 2.3
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 29 2.3
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 29 2.3
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 29 2.3
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 29 3.0
AY102665-1|AAM27494.1| 522|Drosophila melanogaster GH22474p pro... 28 5.3
AE014298-2736|AAF48856.1| 522|Drosophila melanogaster CG6335-PA... 28 5.3
AE014298-2735|AAN09471.1| 563|Drosophila melanogaster CG6335-PB... 28 5.3
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 217 bits (531), Expect = 4e-57
Identities = 102/141 (72%), Positives = 123/141 (87%), Gaps = 1/141 (0%)
Frame = -1
Query: 420 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCV 244
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+
Sbjct: 12 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCI 70
Query: 243 LAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 64
LAE+ DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVI
Sbjct: 71 LAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVI 130
Query: 63 KDFGEETPALDVLKDYLKSSS 1
KDFGEETPALDV+KD+L+ +S
Sbjct: 131 KDFGEETPALDVVKDHLRQNS 151
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 215 bits (526), Expect = 2e-56
Identities = 101/140 (72%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
Frame = -1
Query: 417 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 241
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 240 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 61
AE+ DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 60 DFGEETPALDVLKDYLKSSS 1
DFGEETPALDV+KD+L+ +S
Sbjct: 120 DFGEETPALDVVKDHLRQNS 139
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 215 bits (526), Expect = 2e-56
Identities = 101/140 (72%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
Frame = -1
Query: 417 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 241
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 240 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 61
AE+ DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 60 DFGEETPALDVLKDYLKSSS 1
DFGEETPALDV+KD+L+ +S
Sbjct: 120 DFGEETPALDVVKDHLRQNS 139
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 215 bits (526), Expect = 2e-56
Identities = 101/140 (72%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
Frame = -1
Query: 417 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 241
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 240 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 61
AE+ DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 60 DFGEETPALDVLKDYLKSSS 1
DFGEETPALDV+KD+L+ +S
Sbjct: 120 DFGEETPALDVVKDHLRQNS 139
>BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p
protein.
Length = 127
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = -1
Query: 420 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK 265
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = -1
Query: 345 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 166
+ +L+ AL + L G +EA K L++ A + VLA + + + LC + +P V
Sbjct: 21 IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80
Query: 165 KVDNNKKLGEWAGLCK 118
V + + LG G+ +
Sbjct: 81 FVRSKQALGRACGVSR 96
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = -1
Query: 345 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 166
+ +L+ AL + L G +EA K L++ A + VLA + + + LC + +P V
Sbjct: 21 IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80
Query: 165 KVDNNKKLGEWAGLCK 118
V + + LG G+ +
Sbjct: 81 FVRSKQALGRACGVSR 96
>AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p
protein.
Length = 163
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = -1
Query: 345 LQEVLKTALIHGGLVHGLHEAAKALDKRQ--AVLCVLAENCD-EAA---YKKLVQALCNE 184
++ L A ++ GL A L K ++ C++A+ D ++A ++ L++A C E
Sbjct: 35 IKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEAFCYE 94
Query: 183 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKI 88
+ I ++KVD+ KL G ++ +K+
Sbjct: 95 NDIYVIKVDDATKLSRILGQDSVESCCLVQKV 126
>AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA
protein.
Length = 163
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = -1
Query: 345 LQEVLKTALIHGGLVHGLHEAAKALDKRQ--AVLCVLAENCD-EAA---YKKLVQALCNE 184
++ L A ++ GL A L K ++ C++A+ D ++A ++ L++A C E
Sbjct: 35 IKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEAFCYE 94
Query: 183 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKI 88
+ I ++KVD+ KL G ++ +K+
Sbjct: 95 NDIYVIKVDDATKLSRILGQDSVESCCLVQKV 126
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -1
Query: 297 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 139
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -1
Query: 297 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 139
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -1
Query: 297 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 139
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -1
Query: 297 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 139
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -1
Query: 297 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 139
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 254 YYVFWLRTVMKPHTRNLFRLCATNIRFHWS 165
YY +++ H+R+L RLC N++F W+
Sbjct: 314 YYRRFIKN-FSDHSRHLTRLCKKNVQFEWT 342
>AY102665-1|AAM27494.1| 522|Drosophila melanogaster GH22474p
protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 297 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQAL-CNEHQIPLVKVDNNKKLGEWAGLC 121
GLHE + V AE+ + K LVQ C EHQIPLV V + +L + GL
Sbjct: 435 GLHEQRLKVLNLLWDAGVKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQ--GLV 492
Query: 120 KI 115
K+
Sbjct: 493 KL 494
>AE014298-2736|AAF48856.1| 522|Drosophila melanogaster CG6335-PA,
isoform A protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 297 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQAL-CNEHQIPLVKVDNNKKLGEWAGLC 121
GLHE + V AE+ + K LVQ C EHQIPLV V + +L + GL
Sbjct: 435 GLHEQRLKVLNLLWDAGVKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQ--GLV 492
Query: 120 KI 115
K+
Sbjct: 493 KL 494
>AE014298-2735|AAN09471.1| 563|Drosophila melanogaster CG6335-PB,
isoform B protein.
Length = 563
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 297 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQAL-CNEHQIPLVKVDNNKKLGEWAGLC 121
GLHE + V AE+ + K LVQ C EHQIPLV V + +L + GL
Sbjct: 476 GLHEQRLKVLNLLWDAGVKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQ--GLV 533
Query: 120 KI 115
K+
Sbjct: 534 KL 535
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,399,766
Number of Sequences: 53049
Number of extensions: 465491
Number of successful extensions: 1405
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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