Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o04r
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 38 0.006
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 38 0.006
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 38 0.006
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 31 0.88
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 30 2.0
Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL021474-1|CAA16308.1| 343|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 29 4.7
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 29 4.7
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 29 4.7
AL032639-11|CAA21637.2| 426|Caenorhabditis elegans Hypothetical... 29 4.7
Z68004-2|CAA91982.1| 677|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 28 6.2
Z95619-3|CAB54269.1| 490|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z95619-2|CAB09114.1| 450|Caenorhabditis elegans Hypothetical pr... 28 8.2
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = -3
Query: 741 FPTKVHLTDGDSEIIDSLMKDEDGRK-QLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+P K + G + L++DED +L ITQRL L L + ++A+ SS + +G
Sbjct: 387 YPVKFYRVYGAERLPVKLLRDEDDVPLRLLITQRLSLSSQNL--LFDKLASCSSKELSLG 444
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETEATGVLYSFPPCEFSTD 385
V +T + +P LV+Y KEAAGV+ T G+LY FP CEF+
Sbjct: 445 V------ITGKKELSDLQP---LVNYFTNKEAAGVV------TVPGGILYIFPFCEFALK 489
Query: 384 LL 379
LL
Sbjct: 490 LL 491
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = -3
Query: 741 FPTKVHLTDGDSEIIDSLMKDEDGRK-QLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+P K + G + L++DED +L ITQRL L L + ++A+ SS + +G
Sbjct: 364 YPVKFYRVYGAERLPVKLLRDEDDVPLRLLITQRLSLSSQNL--LFDKLASCSSKELSLG 421
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETEATGVLYSFPPCEFSTD 385
V +T + +P LV+Y KEAAGV+ T G+LY FP CEF+
Sbjct: 422 V------ITGKKELSDLQP---LVNYFTNKEAAGVV------TVPGGILYIFPFCEFALK 466
Query: 384 LL 379
LL
Sbjct: 467 LL 468
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = -3
Query: 729 VHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+HL +G ++ ++ ++ R ++I QRLRLD +++ + RI T+ +A +
Sbjct: 1933 LHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEHIY-RILTNPEYACCLA 1991
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETE-ATGVLYSFPPCEFST 388
+S + ++ T + + YL K+ AG+ SL ET+ + ++ F P E
Sbjct: 1992 LSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSLGEVETKFKSARVHVFAPGEIVN 2049
Query: 387 DLLKRTCHNLTEESFKEDHLVIVVV 313
L +L + D +++V
Sbjct: 2050 RYLSELATSLHDYLQNTDTRYLLIV 2074
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = -3
Query: 729 VHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+HL +G ++ ++ ++ R ++I QRLRLD +++ + RI T+ +A +
Sbjct: 2224 LHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEHIY-RILTNPEYACCLA 2282
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETE-ATGVLYSFPPCEFST 388
+S + ++ T + + YL K+ AG+ SL ET+ + ++ F P E
Sbjct: 2283 LSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSLGEVETKFKSARVHVFAPGEIVN 2340
Query: 387 DLLKRTCHNLTEESFKEDHLVIVVV 313
L +L + D +++V
Sbjct: 2341 RYLSELATSLHDYLQNTDTRYLLIV 2365
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = -3
Query: 729 VHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+HL +G ++ ++ ++ R ++I QRLRLD +++ + RI T+ +A +
Sbjct: 2239 LHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEHIY-RILTNPEYACCLA 2297
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETE-ATGVLYSFPPCEFST 388
+S + ++ T + + YL K+ AG+ SL ET+ + ++ F P E
Sbjct: 2298 LSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSLGEVETKFKSARVHVFAPGEIVN 2355
Query: 387 DLLKRTCHNLTEESFKEDHLVIVVV 313
L +L + D +++V
Sbjct: 2356 RYLSELATSLHDYLQNTDTRYLLIV 2380
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = -3
Query: 729 VHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+HL +G ++ ++ ++ R ++I QRLRLD +++ + RI T+ +A +
Sbjct: 2043 LHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEHIY-RILTNPEYACCLA 2101
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETE-ATGVLYSFPPCEFST 388
+S + ++ T + + YL K+ AG+ SL ET+ + ++ F P E
Sbjct: 2102 LSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSLGEVETKFKSARVHVFAPGEIVN 2159
Query: 387 DLLKRTCHNLTEESFKEDHLVIVVV 313
L +L + D +++V
Sbjct: 2160 RYLSELATSLHDYLQNTDTRYLLIV 2184
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = -3
Query: 729 VHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+HL +G ++ ++ ++ R ++I QRLRLD +++ + RI T+ +A +
Sbjct: 1933 LHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEHIY-RILTNPEYACCLA 1991
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETE-ATGVLYSFPPCEFST 388
+S + ++ T + + YL K+ AG+ SL ET+ + ++ F P E
Sbjct: 1992 LSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSLGEVETKFKSARVHVFAPGEIVN 2049
Query: 387 DLLKRTCHNLTEESFKEDHLVIVVV 313
L +L + D +++V
Sbjct: 2050 RYLSELATSLHDYLQNTDTRYLLIV 2074
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = -3
Query: 729 VHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+HL +G ++ ++ ++ R ++I QRLRLD +++ + RI T+ +A +
Sbjct: 2224 LHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEHIY-RILTNPEYACCLA 2282
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETE-ATGVLYSFPPCEFST 388
+S + ++ T + + YL K+ AG+ SL ET+ + ++ F P E
Sbjct: 2283 LSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSLGEVETKFKSARVHVFAPGEIVN 2340
Query: 387 DLLKRTCHNLTEESFKEDHLVIVVV 313
L +L + D +++V
Sbjct: 2341 RYLSELATSLHDYLQNTDTRYLLIV 2365
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = -3
Query: 729 VHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+HL +G ++ ++ ++ R ++I QRLRLD +++ + RI T+ +A +
Sbjct: 2239 LHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEHIY-RILTNPEYACCLA 2297
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETE-ATGVLYSFPPCEFST 388
+S + ++ T + + YL K+ AG+ SL ET+ + ++ F P E
Sbjct: 2298 LSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSLGEVETKFKSARVHVFAPGEIVN 2355
Query: 387 DLLKRTCHNLTEESFKEDHLVIVVV 313
L +L + D +++V
Sbjct: 2356 RYLSELATSLHDYLQNTDTRYLLIV 2380
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = -3
Query: 729 VHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+HL +G ++ ++ ++ R ++I QRLRLD +++ + RI T+ +A +
Sbjct: 2043 LHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEHIY-RILTNPEYACCLA 2101
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETE-ATGVLYSFPPCEFST 388
+S + ++ T + + YL K+ AG+ SL ET+ + ++ F P E
Sbjct: 2102 LSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSLGEVETKFKSARVHVFAPGEIVN 2159
Query: 387 DLLKRTCHNLTEESFKEDHLVIVVV 313
L +L + D +++V
Sbjct: 2160 RYLSELATSLHDYLQNTDTRYLLIV 2184
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = -3
Query: 729 VHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVG 565
+HL +G ++ ++ ++ R ++I QRLRLD +++ + RI T+ +A +
Sbjct: 399 LHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEHIY-RILTNPEYACCLA 457
Query: 564 VSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISLLNKETE-ATGVLYSFPPCEFST 388
+S + ++ T + + YL K+ AG+ SL ET+ + ++ F P E
Sbjct: 458 LSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSLGEVETKFKSARVHVFAPGEIVN 515
Query: 387 DLLKRTCHNLTEESFKEDHLVIVVV 313
L +L + D +++V
Sbjct: 516 RYLSELATSLHDYLQNTDTRYLLIV 540
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical
protein E03G2.2 protein.
Length = 1503
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 711 DSEIIDSLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNE 532
DS++ +K + L+ T++ R Q KLDD ++R T S A +G + V +
Sbjct: 230 DSQMDQEYLKARWKTEWLKQTEKAREKQVKLDDKRERARTGSEKAPLLGTFNNYGAVNLD 289
Query: 531 D 529
D
Sbjct: 290 D 290
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = -3
Query: 693 SLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQT 514
S ++ E + ITQ L ++ +L DV K+ T ++ + + TN+ +SIQ
Sbjct: 466 SQLRTETDEMNIVITQSLEMENLQLRDVTKKFETENA----------SLLKTNQQLSIQN 515
Query: 513 RPMRNLVSYLKQKE 472
+ L+ L +K+
Sbjct: 516 EEQKRLIQVLLEKQ 529
>Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical
protein T13F2.6 protein.
Length = 579
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 645 RLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNED--VSIQTRPMRNLVSY 487
RL P L ++ R + S+H+I + G + + NED + RP R L+S+
Sbjct: 410 RLARKNPILKAMRTRFHSQSAHSINLATMGVSDISLNEDGICEQEQRPRRRLLSF 464
>AL021474-1|CAA16308.1| 343|Caenorhabditis elegans Hypothetical
protein Y32F6A.1 protein.
Length = 343
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3
Query: 396 FSTDLLKRTCHNLTEESFKEDHLVIVVV 313
FS L+ T H LTEE F E+ L VVV
Sbjct: 42 FSDSLVLTTIHLLTEEDFNENTLKAVVV 69
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -3
Query: 615 DVQKRIATSSSHAIFVG-VSGSTAVVTNEDVSIQTRPMRNLV 493
+++K+I +S +FV V+GST VV + ++ +T+P + ++
Sbjct: 329 EMKKQIGVGASGTVFVANVAGSTDVVAVKRMAFKTQPKKEML 370
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -3
Query: 615 DVQKRIATSSSHAIFVG-VSGSTAVVTNEDVSIQTRPMRNLV 493
+++K+I +S +FV V+GST VV + ++ +T+P + ++
Sbjct: 329 EMKKQIGVGASGTVFVANVAGSTDVVAVKRMAFKTQPKKEML 370
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -3
Query: 615 DVQKRIATSSSHAIFVG-VSGSTAVVTNEDVSIQTRPMRNLV 493
+++K+I +S +FV V+GST VV + ++ +T+P + ++
Sbjct: 329 EMKKQIGVGASGTVFVANVAGSTDVVAVKRMAFKTQPKKEML 370
>AL032639-11|CAA21637.2| 426|Caenorhabditis elegans Hypothetical
protein Y38F1A.10b protein.
Length = 426
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -3
Query: 615 DVQKRIATSSSHAIFVG-VSGSTAVVTNEDVSIQTRPMRNLV 493
+++K+I +S +FV V+GST VV + ++ +T+P + ++
Sbjct: 157 EMKKQIGVGASGTVFVANVAGSTDVVAVKRMAFKTQPKKEML 198
>Z68004-2|CAA91982.1| 677|Caenorhabditis elegans Hypothetical
protein F47B10.2 protein.
Length = 677
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/92 (26%), Positives = 43/92 (46%)
Frame = -3
Query: 738 PTKVHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVGVS 559
PTK+ + DG+S + + L++ E G ++++ K ++IA S H GV
Sbjct: 126 PTKLLILDGNSLLPEDLVRCEKGECAIQLSMESEDRIRKARTFLEKIA--SEHRAVYGV- 182
Query: 558 GSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAG 463
+T T +V+I ++ L L + A G
Sbjct: 183 -TTGFGTFSNVTIPPEKLKKLQLNLIRSHATG 213
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = -3
Query: 696 DSLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQ 517
++L K ED K L+ TQRLRL + + + K A H + S DV+IQ
Sbjct: 596 ETLKKTEDELKNLK-TQRLRLLREQRAEASKFQAFKQKHEREMAQMKSKLQKRENDVAIQ 654
Query: 516 TRPMRNLVSYLKQK 475
R ++ L+ +
Sbjct: 655 KRMTDQKLTVLQMR 668
>Z95619-3|CAB54269.1| 490|Caenorhabditis elegans Hypothetical
protein H21P03.3b protein.
Length = 490
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -2
Query: 286 TLL*YIVLLFVGIYS*FKFFVLHFLLYIL 200
TL+ + LF+G YS +F++LH+L +++
Sbjct: 337 TLVLVVSALFIGEYSPRRFYILHWLSWLV 365
>Z95619-2|CAB09114.1| 450|Caenorhabditis elegans Hypothetical
protein H21P03.3a protein.
Length = 450
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -2
Query: 286 TLL*YIVLLFVGIYS*FKFFVLHFLLYIL 200
TL+ + LF+G YS +F++LH+L +++
Sbjct: 297 TLVLVVSALFIGEYSPRRFYILHWLSWLV 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,145,103
Number of Sequences: 27780
Number of extensions: 331653
Number of successful extensions: 791
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -