Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10o04f
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   6.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.3  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 189 EIVSVTYRLQAPLIQNDASDSHILNLMEHVS 97
           + +S  Y+LQ   + N    + +  L +HVS
Sbjct: 307 QTISWCYKLQEQFVTNSEVRTELFKLAQHVS 337


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 189 EIVSVTYRLQAPLIQNDASDSHILNLMEHVS 97
           + +S  Y+LQ   + N    + +  L +HVS
Sbjct: 307 QTISWCYKLQEQFVTNSEVRTELFKLAQHVS 337


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/42 (21%), Positives = 20/42 (47%)
 Frame = +3

Query: 483 SSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608
           S+H+  +    +  +  + D+  Q   +  LV Y+K+ +  G
Sbjct: 144 SAHSKEIRGENTYILALDGDIDFQPEALHLLVDYMKKNKTLG 185


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/42 (21%), Positives = 20/42 (47%)
 Frame = +3

Query: 483 SSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608
           S+H+  +    +  +  + D+  Q   +  LV Y+K+ +  G
Sbjct: 458 SAHSKEIRGENTYILALDGDIDFQPEALHLLVDYMKKNKTLG 499


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/42 (21%), Positives = 20/42 (47%)
 Frame = +3

Query: 483 SSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608
           S+H+  +    +  +  + D+  Q   +  LV Y+K+ +  G
Sbjct: 691 SAHSKEIRGENTYILALDGDIDFQPEALHLLVDYMKKNKTLG 732


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/42 (21%), Positives = 20/42 (47%)
 Frame = +3

Query: 483 SSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608
           S+H+  +    +  +  + D+  Q   +  LV Y+K+ +  G
Sbjct: 691 SAHSKEIRGENTYILALDGDIDFQPEALHLLVDYMKKNKTLG 732


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,458
Number of Sequences: 336
Number of extensions: 2994
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)