Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10o04f
         (625 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.12 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    28   0.21 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   4.5  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   6.0  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
 Frame = +3

Query: 264  MAELVRKATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQ 443
            +AEL +    I    +++ +S F  KLH      +I+    K   G  +  + + LR  +
Sbjct: 1051 LAELNQILQDIQSKPIVIDDSEFAGKLHAVQEKIDILVEDAKSGSGVGEKTLNEILRELE 1110

Query: 444  PKLDDVQKRIATS------SSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLK 590
             +L +VQK +  +      ++H I  G  G  A + N  +    R + N +  L+
Sbjct: 1111 ARLQEVQKLLDNADQSQEVTNHKISKG--GYNATLANGKIQDARRQLDNAIELLQ 1163


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 28.3 bits (60), Expect = 0.21
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +3

Query: 315 LKNSLFPTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHA 494
           L+  ++ T+L  T    E +D   K   G KQL +TQ ++  Q +L + QK +  +    
Sbjct: 223 LEYVIYETELKETRKQLEELDGQRKSS-GDKQLLLTQEIQKAQDRLKNAQKALKDAKKDV 281

Query: 495 I 497
           +
Sbjct: 282 V 282


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 283  LRTNSAIVRDEDSIPLLLRIDPSESLSGDLRRDRER 176
            +R    I  DE  +  +    PSES  G  RR+R +
Sbjct: 1544 IRAIRKIYGDEFGVTPVTYAQPSESAKGTTRRERSK 1579


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 454 SNLG*SKRNLCVILSCFLPSSSFMR 380
           +NL  S   LCV+   F PS +FMR
Sbjct: 135 TNLALSDILLCVLAVPFTPSYTFMR 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,224
Number of Sequences: 2352
Number of extensions: 11907
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)