BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10o04f (625 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 107 3e-23 BC121184-1|AAI21185.1| 211|Homo sapiens RBM15B protein protein. 107 3e-23 BC001367-1|AAH01367.2| 418|Homo sapiens RBM15B protein protein. 107 3e-23 BC103660-1|AAI03661.1| 544|Homo sapiens RBM15 protein protein. 105 1e-22 BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 105 1e-22 BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 105 1e-22 BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 105 1e-22 BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 105 1e-22 BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 105 1e-22 BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 105 1e-22 AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 105 1e-22 AK025596-1|BAB15185.1| 532|Homo sapiens protein ( Homo sapiens ... 105 1e-22 AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 105 1e-22 AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 105 1e-22 AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 105 1e-22 AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 105 1e-22 AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 105 1e-22 AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 105 1e-22 AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 105 1e-22 AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 105 1e-22 AB209680-1|BAD92917.1| 316|Homo sapiens RNA binding motif prote... 105 1e-22 L13434-1|AAA72367.1| 256|Homo sapiens protein ( Human chromosom... 98 2e-20 AY545557-1|AAS50153.1| 151|Homo sapiens hypothetical protein pr... 74 4e-13 AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 68 3e-11 AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr... 68 3e-11 AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 68 3e-11 AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 68 3e-11 AB023146-1|BAA76773.1| 1663|Homo sapiens KIAA0929 protein protein. 68 3e-11 X69962-1|CAA49586.1| 632|Homo sapiens protein ( H.sapiens FMR-1... 30 7.6 S65791-1|AAB28395.2| 632|Homo sapiens FMR1 protein. 30 7.6 M67468-1|AAA52458.1| 657|Homo sapiens FMR1 protein. 30 7.6 L29074-4|AAB18831.1| 603|Homo sapiens fragile X mental retardat... 30 7.6 L29074-3|AAB18828.1| 620|Homo sapiens fragile X mental retardat... 30 7.6 L29074-2|AAB18832.1| 615|Homo sapiens fragile X mental retardat... 30 7.6 L29074-1|AAB18833.1| 632|Homo sapiens fragile X mental retardat... 30 7.6 L19489-1|AAA62465.1| 60|Homo sapiens FMR1 protein. 30 7.6 D84223-1|BAA95667.1| 1176|Homo sapiens leucyl tRNA synthetase pr... 30 7.6 BC151214-1|AAI51215.1| 1176|Homo sapiens leucyl-tRNA synthetase ... 30 7.6 BC150213-1|AAI50214.1| 1176|Homo sapiens LARS protein protein. 30 7.6 BC131798-1|AAI31799.1| 485|Homo sapiens LARS protein protein. 30 7.6 AY926480-1|AAX10025.1| 485|Homo sapiens cell proliferation-indu... 30 7.6 AY513284-1|AAT08037.1| 485|Homo sapiens proliferation-inducing ... 30 7.6 AK023777-1|BAB14674.1| 928|Homo sapiens protein ( Homo sapiens ... 30 7.6 AK021413-1|BAB13817.1| 438|Homo sapiens protein ( Homo sapiens ... 30 7.6 AB209188-1|BAD92425.1| 527|Homo sapiens fragile X mental retard... 30 7.6 AB037773-1|BAA92590.1| 1212|Homo sapiens KIAA1352 protein protein. 30 7.6 >BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. Length = 563 Score = 107 bits (257), Expect = 3e-23 Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 10/118 (8%) Frame = +3 Query: 297 WHGALILKNSLFPTKLHLTDGDSEIIDSLMKDE-DGRK--QLRITQRLRLDQPKLDDVQK 467 W+G L+LKNS FPT +H+ +GD +I SL+KD G K QL+I QRLRLDQPKLD+V + Sbjct: 395 WNGLLVLKNSCFPTSMHILEGDQGVISSLLKDHTSGSKLTQLKIAQRLRLDQPKLDEVTR 454 Query: 468 RIATSS--SHAIFVGVSGSTAVVTNE-----DVSIQTRPMRNLVSYLKQKEAAGVISL 620 RI S +A+ + + + + E + +Q R +RNLVSYLKQK+AAGVISL Sbjct: 455 RIKQGSPNGYAVLLATQATPSGLGTEGMPTVEPGLQRRLLRNLVSYLKQKQAAGVISL 512 >BC121184-1|AAI21185.1| 211|Homo sapiens RBM15B protein protein. Length = 211 Score = 107 bits (257), Expect = 3e-23 Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 10/118 (8%) Frame = +3 Query: 297 WHGALILKNSLFPTKLHLTDGDSEIIDSLMKDE-DGRK--QLRITQRLRLDQPKLDDVQK 467 W+G L+LKNS FPT +H+ +GD +I SL+KD G K QL+I QRLRLDQPKLD+V + Sbjct: 43 WNGLLVLKNSCFPTSMHILEGDQGVISSLLKDHTSGSKLTQLKIAQRLRLDQPKLDEVTR 102 Query: 468 RIATSS--SHAIFVGVSGSTAVVTNE-----DVSIQTRPMRNLVSYLKQKEAAGVISL 620 RI S +A+ + + + + E + +Q R +RNLVSYLKQK+AAGVISL Sbjct: 103 RIKQGSPNGYAVLLATQATPSGLGTEGMPTVEPGLQRRLLRNLVSYLKQKQAAGVISL 160 >BC001367-1|AAH01367.2| 418|Homo sapiens RBM15B protein protein. Length = 418 Score = 107 bits (257), Expect = 3e-23 Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 10/118 (8%) Frame = +3 Query: 297 WHGALILKNSLFPTKLHLTDGDSEIIDSLMKDE-DGRK--QLRITQRLRLDQPKLDDVQK 467 W+G L+LKNS FPT +H+ +GD +I SL+KD G K QL+I QRLRLDQPKLD+V + Sbjct: 250 WNGLLVLKNSCFPTSMHILEGDQGVISSLLKDHTSGSKLTQLKIAQRLRLDQPKLDEVTR 309 Query: 468 RIATSS--SHAIFVGVSGSTAVVTNE-----DVSIQTRPMRNLVSYLKQKEAAGVISL 620 RI S +A+ + + + + E + +Q R +RNLVSYLKQK+AAGVISL Sbjct: 310 RIKQGSPNGYAVLLATQATPSGLGTEGMPTVEPGLQRRLLRNLVSYLKQKQAAGVISL 367 >BC103660-1|AAI03661.1| 544|Homo sapiens RBM15 protein protein. Length = 544 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 358 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 417 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 418 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 477 Query: 609 VISL 620 VISL Sbjct: 478 VISL 481 >BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. Length = 969 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. Length = 969 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. Length = 969 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. Length = 957 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 763 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 822 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 823 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 882 Query: 609 VISL 620 VISL Sbjct: 883 VISL 886 >BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. Length = 959 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 773 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 832 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 833 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 892 Query: 609 VISL 620 VISL Sbjct: 893 VISL 896 >BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. Length = 957 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 763 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 822 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 823 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 882 Query: 609 VISL 620 VISL Sbjct: 883 VISL 886 >AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif protein 15 protein. Length = 977 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >AK025596-1|BAB15185.1| 532|Homo sapiens protein ( Homo sapiens cDNA: FLJ21943 fis, clone HEP04547. ). Length = 532 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 358 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 417 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 418 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 477 Query: 609 VISL 620 VISL Sbjct: 478 VISL 481 >AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens cDNA FLJ12479 fis, clone NT2RM1001059, weakly similar to NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ). Length = 925 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 739 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 798 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 799 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 858 Query: 609 VISL 620 VISL Sbjct: 859 VISL 862 >AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. Length = 1883 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. Length = 1905 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein protein. Length = 969 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein protein. Length = 957 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding motif protein 15 long form protein. Length = 957 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding motif protein 15 short form plus alternative exon protein. Length = 977 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding motif protein 15 short form protein. Length = 969 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 783 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 842 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 843 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 902 Query: 609 VISL 620 VISL Sbjct: 903 VISL 906 >AB209680-1|BAD92917.1| 316|Homo sapiens RNA binding motif protein 15 variant protein. Length = 316 Score = 105 bits (252), Expect = 1e-22 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 11/124 (8%) Frame = +3 Query: 282 KATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKD-EDGRK--QLRITQRLRLDQPKL 452 K W G L+LKNS FP+ +HL GD ++ SL+ + G K QL+ITQRLRLDQPKL Sbjct: 142 KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKL 201 Query: 453 DDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608 D+V +RI A + +AI + V GS+ + ++ + RP+RNLVSYLKQK+AAG Sbjct: 202 DEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAG 261 Query: 609 VISL 620 VISL Sbjct: 262 VISL 265 >L13434-1|AAA72367.1| 256|Homo sapiens protein ( Human chromosome 3p21.1 gene sequence, complete cds. ). Length = 256 Score = 98.3 bits (234), Expect = 2e-20 Identities = 54/114 (47%), Positives = 74/114 (64%), Gaps = 10/114 (8%) Frame = +3 Query: 297 WHGALILKNSLFPTKLHLTDGDSEIIDSLMKDE-DGRK--QLRITQRLRLDQPKLDDVQK 467 W+G L+LKNS FPT +H+ +GD +I SL+KD G K QL+I QRLRLDQPKLD+ + Sbjct: 143 WNGLLVLKNSCFPTSMHILEGDQGVISSLLKDHTSGSKLTQLKIAQRLRLDQPKLDEDTR 202 Query: 468 RIATSS--SHAIFVGVSGSTAVVTNE-----DVSIQTRPMRNLVSYLKQKEAAG 608 RI S +A+ + + + + E + +Q R +RNLVSYLKQK+AAG Sbjct: 203 RIKQGSPNGYAVLLATQATPSGLGTEGMPTVEPGLQRRLLRNLVSYLKQKQAAG 256 >AY545557-1|AAS50153.1| 151|Homo sapiens hypothetical protein protein. Length = 151 Score = 74.1 bits (174), Expect = 4e-13 Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 3/58 (5%) Frame = +3 Query: 297 WHGALILKNSLFPTKLHLTDGDSEIIDSLMKDE-DGRK--QLRITQRLRLDQPKLDDV 461 W+G L+LKNS FPT +H+ +GD +I SL+KD G K QL+I QRLRLDQPKLD+V Sbjct: 90 WNGLLVLKNSCFPTSMHILEGDQGVISSLLKDHTSGSKLTQLKIAQRLRLDQPKLDEV 147 >AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated repressor protein (SHARP) protein. Length = 3664 Score = 67.7 bits (158), Expect = 3e-11 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Frame = +3 Query: 264 MAELVRKATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQ 443 M +L++K +W G L LKN +LH G++ + + +G LRI QR+RL+ Sbjct: 3498 MVQLLKKYPIVWQGLLALKNDTAAVQLHFVSGNNVLAHRSLPLSEGGPPLRIAQRMRLEA 3557 Query: 444 PKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMR-NLVSYLKQKEAAGVISL 620 +L+ V +R+ + + + + + EDV QT ++ ++YL+ K+AAG+I++ Sbjct: 3558 TQLEGVARRMTVETDYCLLLALPCGR---DQEDVVSQTESLKAAFITYLQAKQAAGIINV 3614 >AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein protein. Length = 3261 Score = 67.7 bits (158), Expect = 3e-11 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Frame = +3 Query: 264 MAELVRKATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQ 443 M +L++K +W G L LKN +LH G++ + + +G LRI QR+RL+ Sbjct: 3095 MVQLLKKYPIVWQGLLALKNDTAAVQLHFVSGNNVLAHRSLPLSEGGPPLRIAQRMRLEA 3154 Query: 444 PKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMR-NLVSYLKQKEAAGVISL 620 +L+ V +R+ + + + + + EDV QT ++ ++YL+ K+AAG+I++ Sbjct: 3155 TQLEGVARRMTVETDYCLLLALPCGR---DQEDVVSQTESLKAAFITYLQAKQAAGIINV 3211 >AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated repressor protein (SHARP) protein. Length = 3664 Score = 67.7 bits (158), Expect = 3e-11 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Frame = +3 Query: 264 MAELVRKATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQ 443 M +L++K +W G L LKN +LH G++ + + +G LRI QR+RL+ Sbjct: 3498 MVQLLKKYPIVWQGLLALKNDTAAVQLHFVSGNNVLAHRSLPLSEGGPPLRIAQRMRLEA 3557 Query: 444 PKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMR-NLVSYLKQKEAAGVISL 620 +L+ V +R+ + + + + + EDV QT ++ ++YL+ K+AAG+I++ Sbjct: 3558 TQLEGVARRMTVETDYCLLLALPCGR---DQEDVVSQTESLKAAFITYLQAKQAAGIINV 3614 >AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transcription cofactor protein. Length = 3664 Score = 67.7 bits (158), Expect = 3e-11 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Frame = +3 Query: 264 MAELVRKATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQ 443 M +L++K +W G L LKN +LH G++ + + +G LRI QR+RL+ Sbjct: 3498 MVQLLKKYPIVWQGLLALKNDTAAVQLHFVSGNNVLAHRSLPLSEGGPPLRIAQRMRLEA 3557 Query: 444 PKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMR-NLVSYLKQKEAAGVISL 620 +L+ V +R+ + + + + + EDV QT ++ ++YL+ K+AAG+I++ Sbjct: 3558 TQLEGVARRMTVETDYCLLLALPCGR---DQEDVVSQTESLKAAFITYLQAKQAAGIINV 3614 >AB023146-1|BAA76773.1| 1663|Homo sapiens KIAA0929 protein protein. Length = 1663 Score = 67.7 bits (158), Expect = 3e-11 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Frame = +3 Query: 264 MAELVRKATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQ 443 M +L++K +W G L LKN +LH G++ + + +G LRI QR+RL+ Sbjct: 1497 MVQLLKKYPIVWQGLLALKNDTAAVQLHFVSGNNVLAHRSLPLSEGGPPLRIAQRMRLEA 1556 Query: 444 PKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMR-NLVSYLKQKEAAGVISL 620 +L+ V +R+ + + + + + EDV QT ++ ++YL+ K+AAG+I++ Sbjct: 1557 TQLEGVARRMTVETDYCLLLALPCGR---DQEDVVSQTESLKAAFITYLQAKQAAGIINV 1613 >X69962-1|CAA49586.1| 632|Homo sapiens protein ( H.sapiens FMR-1 mRNA. ). Length = 632 Score = 29.9 bits (64), Expect = 7.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 78 DYRDE--EWRRAPLDSEYESRLRRSGSREPG 164 D+RDE +W AP + E ES LRR R G Sbjct: 505 DHRDELSDWSLAPTEEERESFLRRGDGRRRG 535 >S65791-1|AAB28395.2| 632|Homo sapiens FMR1 protein. Length = 632 Score = 29.9 bits (64), Expect = 7.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 78 DYRDE--EWRRAPLDSEYESRLRRSGSREPG 164 D+RDE +W AP + E ES LRR R G Sbjct: 505 DHRDELSDWSLAPTEEERESFLRRGDGRRRG 535 >M67468-1|AAA52458.1| 657|Homo sapiens FMR1 protein. Length = 657 Score = 29.9 bits (64), Expect = 7.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 78 DYRDE--EWRRAPLDSEYESRLRRSGSREPG 164 D+RDE +W AP + E ES LRR R G Sbjct: 547 DHRDELSDWSLAPTEEERESFLRRGDGRRRG 577 >L29074-4|AAB18831.1| 603|Homo sapiens fragile X mental retardation syndrome protein protein. Length = 603 Score = 29.9 bits (64), Expect = 7.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 78 DYRDE--EWRRAPLDSEYESRLRRSGSREPG 164 D+RDE +W AP + E ES LRR R G Sbjct: 493 DHRDELSDWSLAPTEEERESFLRRGDGRRRG 523 >L29074-3|AAB18828.1| 620|Homo sapiens fragile X mental retardation syndrome protein protein. Length = 620 Score = 29.9 bits (64), Expect = 7.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 78 DYRDE--EWRRAPLDSEYESRLRRSGSREPG 164 D+RDE +W AP + E ES LRR R G Sbjct: 493 DHRDELSDWSLAPTEEERESFLRRGDGRRRG 523 >L29074-2|AAB18832.1| 615|Homo sapiens fragile X mental retardation syndrome protein protein. Length = 615 Score = 29.9 bits (64), Expect = 7.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 78 DYRDE--EWRRAPLDSEYESRLRRSGSREPG 164 D+RDE +W AP + E ES LRR R G Sbjct: 505 DHRDELSDWSLAPTEEERESFLRRGDGRRRG 535 >L29074-1|AAB18833.1| 632|Homo sapiens fragile X mental retardation syndrome protein protein. Length = 632 Score = 29.9 bits (64), Expect = 7.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 78 DYRDE--EWRRAPLDSEYESRLRRSGSREPG 164 D+RDE +W AP + E ES LRR R G Sbjct: 505 DHRDELSDWSLAPTEEERESFLRRGDGRRRG 535 >L19489-1|AAA62465.1| 60|Homo sapiens FMR1 protein. Length = 60 Score = 29.9 bits (64), Expect = 7.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 78 DYRDE--EWRRAPLDSEYESRLRRSGSREPG 164 D+RDE +W AP + E ES LRR R G Sbjct: 14 DHRDELSDWSLAPTEEERESFLRRGDGRRRG 44 >D84223-1|BAA95667.1| 1176|Homo sapiens leucyl tRNA synthetase protein. Length = 1176 Score = 29.9 bits (64), Expect = 7.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 321 NSLFPTKLHLTDGDS--EIIDSLMKDEDGRKQLRITQRLRLDQPKL 452 N F TK+ + GD+ II LMK G K L + +R D P L Sbjct: 1078 NGHFSTKIEIKQGDNCDSIIRRLMKMNRGIKDLSKVKLMRFDDPLL 1123 >BC151214-1|AAI51215.1| 1176|Homo sapiens leucyl-tRNA synthetase protein. Length = 1176 Score = 29.9 bits (64), Expect = 7.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 321 NSLFPTKLHLTDGDS--EIIDSLMKDEDGRKQLRITQRLRLDQPKL 452 N F TK+ + GD+ II LMK G K L + +R D P L Sbjct: 1078 NGHFSTKIEIRQGDNCDSIIRRLMKMNRGIKDLSKVKLMRFDDPLL 1123 >BC150213-1|AAI50214.1| 1176|Homo sapiens LARS protein protein. Length = 1176 Score = 29.9 bits (64), Expect = 7.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 321 NSLFPTKLHLTDGDS--EIIDSLMKDEDGRKQLRITQRLRLDQPKL 452 N F TK+ + GD+ II LMK G K L + +R D P L Sbjct: 1078 NGHFSTKIEIRQGDNCDSIIRRLMKMNRGIKDLSKVKLMRFDDPLL 1123 >BC131798-1|AAI31799.1| 485|Homo sapiens LARS protein protein. Length = 485 Score = 29.9 bits (64), Expect = 7.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 321 NSLFPTKLHLTDGDS--EIIDSLMKDEDGRKQLRITQRLRLDQPKL 452 N F TK+ + GD+ II LMK G K L + +R D P L Sbjct: 387 NGHFSTKIEIRQGDNCDSIIRRLMKMNRGIKDLSKVKLMRFDDPLL 432 >AY926480-1|AAX10025.1| 485|Homo sapiens cell proliferation-inducing protein 57 protein. Length = 485 Score = 29.9 bits (64), Expect = 7.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 321 NSLFPTKLHLTDGDS--EIIDSLMKDEDGRKQLRITQRLRLDQPKL 452 N F TK+ + GD+ II LMK G K L + +R D P L Sbjct: 387 NGHFSTKIEIRQGDNCDSIIRRLMKMNRGIKDLSKVKLMRFDDPLL 432 >AY513284-1|AAT08037.1| 485|Homo sapiens proliferation-inducing protein 44 protein. Length = 485 Score = 29.9 bits (64), Expect = 7.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 321 NSLFPTKLHLTDGDS--EIIDSLMKDEDGRKQLRITQRLRLDQPKL 452 N F TK+ + GD+ II LMK G K L + +R D P L Sbjct: 387 NGHFSTKIEIRQGDNCDSIIRRLMKMNRGIKDLSKVKLMRFDDPLL 432 >AK023777-1|BAB14674.1| 928|Homo sapiens protein ( Homo sapiens cDNA FLJ13715 fis, clone PLACE2000404, moderately similar to PROBABLE LEUCYL-TRNA SYNTHETASE (EC 6.1.1.4). ). Length = 928 Score = 29.9 bits (64), Expect = 7.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 321 NSLFPTKLHLTDGDS--EIIDSLMKDEDGRKQLRITQRLRLDQPKL 452 N F TK+ + GD+ II LMK G K L + +R D P L Sbjct: 830 NGHFSTKIEIRQGDNCDSIIRRLMKMNRGIKDLSKVKLMRFDDPLL 875 >AK021413-1|BAB13817.1| 438|Homo sapiens protein ( Homo sapiens cDNA FLJ11351 fis, clone HEMBA1000012, weakly similar to PROBABLE LEUCYL-TRNA SYNTHETASE (EC 6.1.1.4). ). Length = 438 Score = 29.9 bits (64), Expect = 7.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 321 NSLFPTKLHLTDGDS--EIIDSLMKDEDGRKQLRITQRLRLDQPKL 452 N F TK+ + GD+ II LMK G K L + +R D P L Sbjct: 340 NGHFSTKIEIRQGDNCDSIIRRLMKMNRGIKDLSKVKLMRFDDPLL 385 >AB209188-1|BAD92425.1| 527|Homo sapiens fragile X mental retardation 1 variant protein. Length = 527 Score = 29.9 bits (64), Expect = 7.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 78 DYRDE--EWRRAPLDSEYESRLRRSGSREPG 164 D+RDE +W AP + E ES LRR R G Sbjct: 400 DHRDELSDWSLAPTEEERESFLRRGDGRRRG 430 >AB037773-1|BAA92590.1| 1212|Homo sapiens KIAA1352 protein protein. Length = 1212 Score = 29.9 bits (64), Expect = 7.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 321 NSLFPTKLHLTDGDS--EIIDSLMKDEDGRKQLRITQRLRLDQPKL 452 N F TK+ + GD+ II LMK G K L + +R D P L Sbjct: 1114 NGHFSTKIEIRQGDNCDSIIRRLMKMNRGIKDLSKVKLMRFDDPLL 1159 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 83,840,203 Number of Sequences: 237096 Number of extensions: 1707858 Number of successful extensions: 4000 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 3826 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3949 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 6747805200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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