Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10o04f
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 49 2e-06
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 49 2e-06
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 45 5e-05
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 45 5e-05
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 45 5e-05
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.22
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 31 0.67
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 31 0.67
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 30 1.5
Z68004-2|CAA91982.1| 677|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 29 3.6
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 29 3.6
AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical... 29 3.6
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 29 3.6
AL032639-11|CAA21637.2| 426|Caenorhabditis elegans Hypothetical... 29 3.6
Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical pr... 28 4.7
U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal catech... 28 4.7
U80836-1|AAV58889.1| 393|Caenorhabditis elegans Abnormal catech... 28 4.7
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 28 4.7
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 28 4.7
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 28 4.7
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 28 4.7
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 28 6.2
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 28 6.2
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Frame = +3
Query: 267 AELVRKATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKDEDG-RKQLRITQRLRLDQ 443
AEL W G + LK + +P K + G + L++DED +L ITQRL L
Sbjct: 366 AELEEAYAATWSGKMALKKTDYPVKFYRVYGAERLPVKLLRDEDDVPLRLLITQRLSLSS 425
Query: 444 PKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
L + ++A+ SS + +GV + +++S ++ LV+Y KEAAGV+++
Sbjct: 426 QNL--LFDKLASCSSKELSLGV-----ITGKKELS----DLQPLVNYFTNKEAAGVVTV 473
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Frame = +3
Query: 267 AELVRKATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKDEDG-RKQLRITQRLRLDQ 443
AEL W G + LK + +P K + G + L++DED +L ITQRL L
Sbjct: 343 AELEEAYAATWSGKMALKKTDYPVKFYRVYGAERLPVKLLRDEDDVPLRLLITQRLSLSS 402
Query: 444 PKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
L + ++A+ SS + +GV + +++S ++ LV+Y KEAAGV+++
Sbjct: 403 QNL--LFDKLASCSSKELSLGV-----ITGKKELS----DLQPLVNYFTNKEAAGVVTV 450
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +3
Query: 294 IWHGALILKNSLFPTKLHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDD 458
+W G L LK++ LHL +G ++ ++ ++ R ++I QRLRLD +++
Sbjct: 1917 VWTGRLALKSTEAMINLHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEH 1976
Query: 459 VQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
+ RI T+ +A + +S + ++ T + + YL K+ AG+ SL
Sbjct: 1977 IY-RILTNPEYACCLALSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSL 2027
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +3
Query: 294 IWHGALILKNSLFPTKLHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDD 458
+W G L LK++ LHL +G ++ ++ ++ R ++I QRLRLD +++
Sbjct: 2208 VWTGRLALKSTEAMINLHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEH 2267
Query: 459 VQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
+ RI T+ +A + +S + ++ T + + YL K+ AG+ SL
Sbjct: 2268 IY-RILTNPEYACCLALSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSL 2318
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +3
Query: 294 IWHGALILKNSLFPTKLHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDD 458
+W G L LK++ LHL +G ++ ++ ++ R ++I QRLRLD +++
Sbjct: 2223 VWTGRLALKSTEAMINLHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEH 2282
Query: 459 VQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
+ RI T+ +A + +S + ++ T + + YL K+ AG+ SL
Sbjct: 2283 IY-RILTNPEYACCLALSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSL 2333
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +3
Query: 294 IWHGALILKNSLFPTKLHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDD 458
+W G L LK++ LHL +G ++ ++ ++ R ++I QRLRLD +++
Sbjct: 2027 VWTGRLALKSTEAMINLHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEH 2086
Query: 459 VQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
+ RI T+ +A + +S + ++ T + + YL K+ AG+ SL
Sbjct: 2087 IY-RILTNPEYACCLALSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSL 2137
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +3
Query: 294 IWHGALILKNSLFPTKLHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDD 458
+W G L LK++ LHL +G ++ ++ ++ R ++I QRLRLD +++
Sbjct: 1917 VWTGRLALKSTEAMINLHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEH 1976
Query: 459 VQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
+ RI T+ +A + +S + ++ T + + YL K+ AG+ SL
Sbjct: 1977 IY-RILTNPEYACCLALSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSL 2027
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +3
Query: 294 IWHGALILKNSLFPTKLHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDD 458
+W G L LK++ LHL +G ++ ++ ++ R ++I QRLRLD +++
Sbjct: 2208 VWTGRLALKSTEAMINLHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEH 2267
Query: 459 VQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
+ RI T+ +A + +S + ++ T + + YL K+ AG+ SL
Sbjct: 2268 IY-RILTNPEYACCLALSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSL 2318
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +3
Query: 294 IWHGALILKNSLFPTKLHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDD 458
+W G L LK++ LHL +G ++ ++ ++ R ++I QRLRLD +++
Sbjct: 2223 VWTGRLALKSTEAMINLHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEH 2282
Query: 459 VQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
+ RI T+ +A + +S + ++ T + + YL K+ AG+ SL
Sbjct: 2283 IY-RILTNPEYACCLALSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSL 2333
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +3
Query: 294 IWHGALILKNSLFPTKLHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDD 458
+W G L LK++ LHL +G ++ ++ ++ R ++I QRLRLD +++
Sbjct: 2027 VWTGRLALKSTEAMINLHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEH 2086
Query: 459 VQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
+ RI T+ +A + +S + ++ T + + YL K+ AG+ SL
Sbjct: 2087 IY-RILTNPEYACCLALSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSL 2137
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +3
Query: 294 IWHGALILKNSLFPTKLHLTDGDSEIIDSLM-----KDEDGRKQLRITQRLRLDQPKLDD 458
+W G L LK++ LHL +G ++ ++ ++ R ++I QRLRLD +++
Sbjct: 383 VWTGRLALKSTEAMINLHLINGSETFLNDVLGRQVTEENPRRDSVKILQRLRLDNGQVEH 442
Query: 459 VQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAGVISL 620
+ RI T+ +A + +S + ++ T + + YL K+ AG+ SL
Sbjct: 443 IY-RILTNPEYACCLALSSVNNIENLKE--NDTNLKSHFIDYLINKKIAGISSL 493
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = -1
Query: 223 DPSESLSGDLRRDRERDLSTPGSLDPERRKRLSYSESNGARLHSSSR 83
D S S D RDR RD S S + ER + S S R HS SR
Sbjct: 118 DRSRDRSRDRSRDRSRDRSRERSRERERTRSRSRSPQERDRSHSKSR 164
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical
protein E03G2.2 protein.
Length = 1503
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 360 DSEIIDSLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNE 539
DS++ +K + L+ T++ R Q KLDD ++R T S A +G + V +
Sbjct: 230 DSQMDQEYLKARWKTEWLKQTEKAREKQVKLDDKRERARTGSEKAPLLGTFNNYGAVNLD 289
Query: 540 D 542
D
Sbjct: 290 D 290
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 267 AELVRKATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKDEDG-RKQLRITQ 425
AEL W G + LK + +P K + G + L++DED +L ITQ
Sbjct: 366 AELEEAYAATWSGKMALKKTDYPVKFYRVYGAERLPVKLLRDEDDVPLRLLITQ 419
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 378 SLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQT 557
S ++ E + ITQ L ++ +L DV K+ T ++ + + TN+ +SIQ
Sbjct: 466 SQLRTETDEMNIVITQSLEMENLQLRDVTKKFETENA----------SLLKTNQQLSIQN 515
Query: 558 RPMRNLVSYLKQKE 599
+ L+ L +K+
Sbjct: 516 EEQKRLIQVLLEKQ 529
>Z68004-2|CAA91982.1| 677|Caenorhabditis elegans Hypothetical
protein F47B10.2 protein.
Length = 677
Score = 29.5 bits (63), Expect = 2.0
Identities = 25/92 (27%), Positives = 43/92 (46%)
Frame = +3
Query: 333 PTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVGVS 512
PTKL + DG+S + + L++ E G ++++ K ++IA S H GV
Sbjct: 126 PTKLLILDGNSLLPEDLVRCEKGECAIQLSMESEDRIRKARTFLEKIA--SEHRAVYGV- 182
Query: 513 GSTAVVTNEDVSIQTRPMRNLVSYLKQKEAAG 608
+T T +V+I ++ L L + A G
Sbjct: 183 -TTGFGTFSNVTIPPEKLKKLQLNLIRSHATG 213
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/82 (18%), Positives = 36/82 (43%)
Frame = +3
Query: 276 VRKATTIWHGALILKNSLFPTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQPKLD 455
+R + +G ++ K L PT + +G E++D+++ + + ++ + +
Sbjct: 438 LRPQMELSNGFILHKKELIPTAVETFEGFREVVDAVLTLNNSTSSIGLSSGSNTSRKTIS 497
Query: 456 DVQKRIATSSSHAIFVGVSGST 521
D+Q R + +GST
Sbjct: 498 DLQMRKQQYRMRLLASQAAGST 519
>Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical
protein T13F2.6 protein.
Length = 579
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 426 RLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNED--VSIQTRPMRNLVSY 584
RL P L ++ R + S+H+I + G + + NED + RP R L+S+
Sbjct: 410 RLARKNPILKAMRTRFHSQSAHSINLATMGVSDISLNEDGICEQEQRPRRRLLSF 464
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 456 DVQKRIATSSSHAIFVG-VSGSTAVVTNEDVSIQTRPMRNLV 578
+++K+I +S +FV V+GST VV + ++ +T+P + ++
Sbjct: 329 EMKKQIGVGASGTVFVANVAGSTDVVAVKRMAFKTQPKKEML 370
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 456 DVQKRIATSSSHAIFVG-VSGSTAVVTNEDVSIQTRPMRNLV 578
+++K+I +S +FV V+GST VV + ++ +T+P + ++
Sbjct: 329 EMKKQIGVGASGTVFVANVAGSTDVVAVKRMAFKTQPKKEML 370
>AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical
protein Y73F8A.20 protein.
Length = 541
Score = 28.7 bits (61), Expect = 3.6
Identities = 28/93 (30%), Positives = 40/93 (43%)
Frame = -1
Query: 361 SPSVKCNLVGNNEFLRISAPCQIVVALRTNSAIVRDEDSIPLLLRIDPSESLSGDLRRDR 182
SP K + V N RI I+ R N+ I R + LL ++ SE + R R
Sbjct: 415 SPPPKSSQVFINAPERIRHRRTIITKKRRNTKITRKQR---LLRKVRKSEEKEKEKDRKR 471
Query: 181 ERDLSTPGSLDPERRKRLSYSESNGARLHSSSR 83
+ S ++RK S S SNG SS++
Sbjct: 472 AKKALIKNSNLKKKRKSNSSSSSNGTTETSSTK 504
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 456 DVQKRIATSSSHAIFVG-VSGSTAVVTNEDVSIQTRPMRNLV 578
+++K+I +S +FV V+GST VV + ++ +T+P + ++
Sbjct: 329 EMKKQIGVGASGTVFVANVAGSTDVVAVKRMAFKTQPKKEML 370
>AL032639-11|CAA21637.2| 426|Caenorhabditis elegans Hypothetical
protein Y38F1A.10b protein.
Length = 426
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 456 DVQKRIATSSSHAIFVG-VSGSTAVVTNEDVSIQTRPMRNLV 578
+++K+I +S +FV V+GST VV + ++ +T+P + ++
Sbjct: 157 EMKKQIGVGASGTVFVANVAGSTDVVAVKRMAFKTQPKKEML 198
>Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical
protein F23H12.6 protein.
Length = 1025
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/43 (23%), Positives = 26/43 (60%)
Frame = -2
Query: 216 QSHYQVIYDEIVSVTYRLQAPLIQNDASDSHILNLMEHVSILR 88
Q ++ + + +++ Y+L+ P+ + D S+ +L +EH ++ R
Sbjct: 525 QGYFVYMNEPVLARKYQLRVPIFKQDRSELRMLRSIEHDNVNR 567
>U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform b protein.
Length = 454
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +1
Query: 13 GVEVGIVAVDVAPTEVSIMVQEIIVTKNGDVLH*IQNMRVACVVLDQGSLESIGHAHDLV 192
G+EV A DV P E SI++ T + V +QNM A V + +HD++
Sbjct: 14 GIEVIFTANDVTPIEFSIILTSTDPTLSNFVSDILQNMSSAKVQICHVETRGNEASHDVL 73
Query: 193 V 195
+
Sbjct: 74 L 74
>U80836-1|AAV58889.1| 393|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform a protein.
Length = 393
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +1
Query: 13 GVEVGIVAVDVAPTEVSIMVQEIIVTKNGDVLH*IQNMRVACVVLDQGSLESIGHAHDLV 192
G+EV A DV P E SI++ T + V +QNM A V + +HD++
Sbjct: 84 GIEVIFTANDVTPIEFSIILTSTDPTLSNFVSDILQNMSSAKVQICHVETRGNEASHDVL 143
Query: 193 V 195
+
Sbjct: 144 L 144
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 256 DEDSIPLLLRIDPSESLSGDLRRDRERDLSTPGSLDPERRKRLSYSESNGARLHSSS 86
D DS P ++ + LS D RR R ST PER++ +S S + +SS
Sbjct: 147 DSDSTPGEVQRRKTSVLSNDKRRRRASFSSTSIQSSPERQRDVSSSSRTSSSSSTSS 203
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 256 DEDSIPLLLRIDPSESLSGDLRRDRERDLSTPGSLDPERRKRLSYSESNGARLHSSS 86
D DS P ++ + LS D RR R ST PER++ +S S + +SS
Sbjct: 918 DSDSTPGEVQRRKTSVLSNDKRRRRASFSSTSIQSSPERQRDVSSSSRTSSSSSTSS 974
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 256 DEDSIPLLLRIDPSESLSGDLRRDRERDLSTPGSLDPERRKRLSYSESNGARLHSSS 86
D DS P ++ + LS D RR R ST PER++ +S S + +SS
Sbjct: 915 DSDSTPGEVQRRKTSVLSNDKRRRRASFSSTSIQSSPERQRDVSSSSRTSSSSSTSS 971
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +3
Query: 375 DSLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQ 554
++L K ED K L+ TQRLRL + + + K A H + S DV+IQ
Sbjct: 596 ETLKKTEDELKNLK-TQRLRLLREQRAEASKFQAFKQKHEREMAQMKSKLQKRENDVAIQ 654
Query: 555 TRPMRNLVSYLKQK 596
R ++ L+ +
Sbjct: 655 KRMTDQKLTVLQMR 668
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = +3
Query: 315 LKNSLFPTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHA 494
LK+ + KL + EI S ++ E + +TQ L ++ +L D K+ T ++
Sbjct: 738 LKDQIEREKLCSKQLEKEI--SQLRTEADEMNIVMTQSLEMENLQLRDATKKFETENA-- 793
Query: 495 IFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKE 599
+ + TN+ +SIQ + L+ L +K+
Sbjct: 794 --------SLLKTNQQLSIQNEEQKRLIQVLLEKQ 820
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = +3
Query: 315 LKNSLFPTKLHLTDGDSEIIDSLMKDEDGRKQLRITQRLRLDQPKLDDVQKRIATSSSHA 494
LK+ + KL + EI S ++ E + +TQ L ++ +L D K+ T ++
Sbjct: 772 LKDQIEREKLCSKQLEKEI--SQLRTEADEMNIVMTQSLEMENLQLRDATKKFETENA-- 827
Query: 495 IFVGVSGSTAVVTNEDVSIQTRPMRNLVSYLKQKE 599
+ + TN+ +SIQ + L+ L +K+
Sbjct: 828 --------SLLKTNQQLSIQNEEQKRLIQVLLEKQ 854
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,699,283
Number of Sequences: 27780
Number of extensions: 281717
Number of successful extensions: 944
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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