Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10o02r
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.0  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   5.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -1

Query: 593 GKQGLDFYTELKTVVSFWRESDVSHAKPAVSMP 495
           G  GLD +  +   V FW +     +K  + +P
Sbjct: 386 GDSGLDLFLSVDYAVKFWTKKGFPKSKIVLGVP 418


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 406 TERNSHFNFIENVW*FLNGIG 344
           T++NS     +NVW F+  +G
Sbjct: 144 TQQNSDVFIFDNVWLFILWVG 164


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 481 LIKKKKVLISFELFEEGFCT 422
           L+K+ +V   F  F EGF T
Sbjct: 319 LVKEGEVAFFFTQFSEGFST 338


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 481 LIKKKKVLISFELFEEGFCT 422
           L+K+ +V   F  F EGF T
Sbjct: 319 LVKEGEVAFFFTQFSEGFST 338


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 481 LIKKKKVLISFELFEEGFCT 422
           L+K+ +V   F  F EGF T
Sbjct: 319 LVKEGEVAFFFTQFSEGFST 338


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 481 LIKKKKVLISFELFEEGFCT 422
           L+K+ +V   F  F EGF T
Sbjct: 319 LVKEGEVAFFFTQFSEGFST 338


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 120 IWTSKAKIDLLGHF 161
           +WTSK KI  L  F
Sbjct: 293 VWTSKEKISFLRGF 306


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,248
Number of Sequences: 336
Number of extensions: 3030
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)