Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10o02f
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.8  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   7.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 158 SIYSFVVGAELLYERRSTSWDS 93
           SIYSF+    L++   S  W S
Sbjct: 477 SIYSFLERLNLIFMSSSLQWSS 498


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 158 SIYSFVVGAELLYERRSTSWDS 93
           SIYSF+    L++   S  W S
Sbjct: 515 SIYSFLERLNLIFMSSSLQWSS 536


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 615 REHPQWDHHR 586
           REHP WD  R
Sbjct: 171 REHPFWDDQR 180


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 597 PTVDVPASAGNRKHVY 644
           P VD P S GN  ++Y
Sbjct: 310 PMVDNPESTGNLVYIY 325


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = -3

Query: 523 CLWRCFGC 500
           C W CF C
Sbjct: 605 CCWHCFNC 612


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +1

Query: 583 FPVMIPLWMFPP 618
           +P ++P W  PP
Sbjct: 480 YPTLLPQWCLPP 491


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,385
Number of Sequences: 438
Number of extensions: 3566
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)