Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n24r
         (771 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IJU7 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_P75800 Cluster: Uncharacterized protein yliE; n=22; cel...    34   4.5  
UniRef50_Q7N071 Cluster: Similarities with the central region of...    33   5.9  
UniRef50_A7R6Y3 Cluster: Chromosome undetermined scaffold_1484, ...    33   7.9  
UniRef50_A2FN80 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q8IJU7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1345

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +1

Query: 28  YKYCFFLLITKSLMLLIFTNAPRIYANNFYMKK-TIVDSNMIYTGNTIFHNYK*TNKWTS 204
           Y   +F+ I    +LL        Y NN+Y      V + MIY+   IF N   TN WT 
Sbjct: 115 YSNIYFVCINTLFLLLNNITQNNNYHNNYYHNNYNDVINCMIYSCFDIFFNLISTNNWTR 174

Query: 205 FRL*ISLIK*INF 243
             L I +   +NF
Sbjct: 175 KNLHIQIFSKLNF 187


>UniRef50_P75800 Cluster: Uncharacterized protein yliE; n=22;
           cellular organisms|Rep: Uncharacterized protein yliE -
           Escherichia coli (strain K12)
          Length = 782

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -2

Query: 719 FTLHI*DDDDKFIISQPIY*SLPWWYCR*YLNVTSVNNDVYYLK 588
           FTLHI   D   +    I+  L W Y   YL+  S N++V +LK
Sbjct: 177 FTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLK 220


>UniRef50_Q7N071 Cluster: Similarities with the central region of
           DNA-directed RNA polymerase; n=1; Photorhabdus
           luminescens subsp. laumondii|Rep: Similarities with the
           central region of DNA-directed RNA polymerase -
           Photorhabdus luminescens subsp. laumondii
          Length = 831

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 23/67 (34%), Positives = 36/67 (53%)
 Frame = -2

Query: 230 LIKLIYSRNDVHLFVYL*L*NIVLPVYIMFESTIVFFI*KLFA*IRGALVKISNIKDFVI 51
           +I L+ S     + +Y+    I LP+    E + +  I  L A +R AL  I+NI  F+I
Sbjct: 25  VINLLSSFFSFSILIYI----ITLPLTNSLEESSIGLIIFLIAILRPALSVINNISLFLI 80

Query: 50  NKKKQYL 30
           NKK+ Y+
Sbjct: 81  NKKQAYI 87


>UniRef50_A7R6Y3 Cluster: Chromosome undetermined scaffold_1484,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_1484, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 218

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -3

Query: 163 CCLCISCLNPLLSSSYKNCLHKFV 92
           CCL ISC +  LS+S  NC HK V
Sbjct: 38  CCLIISCQDSQLSASPLNCRHKLV 61


>UniRef50_A2FN80 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1092

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 61   SLMLLIFTNAPRIYANNFYMKKTIVDSNMIYTGNTIFHN 177
            S +LLIF   P+I   +F +     DSN++Y  +TI +N
Sbjct: 936  SAILLIFRKYPQIVNQDFGLHFEYTDSNLVYRNSTIHYN 974


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,173,006
Number of Sequences: 1657284
Number of extensions: 11004031
Number of successful extensions: 22732
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22715
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)