Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n23r
         (741 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1PXC9 Cluster: Putative uncharacterized protein; n=1; ...    33   9.7  
UniRef50_Q69HC9 Cluster: NADH-ubiquinone oxidoreductase chain 4;...    33   9.7  

>UniRef50_Q1PXC9 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Kuenenia stuttgartiensis|Rep: Putative
           uncharacterized protein - Candidatus Kuenenia
           stuttgartiensis
          Length = 223

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -3

Query: 676 LLLISLLFNGCYYTYKPSSSITLSIKKNCIKIRCVVLKI*VYIGTD 539
           +LL+ L+  GC+ T KP  +I  SI K   +I    L + +YI  D
Sbjct: 15  VLLVFLMLGGCFSTQKPPVTIAPSIDKRLYEIPQQPLTMGIYIDPD 60


>UniRef50_Q69HC9 Cluster: NADH-ubiquinone oxidoreductase chain 4;
           n=1; Pachypsylla venusta|Rep: NADH-ubiquinone
           oxidoreductase chain 4 - Pachypsylla venusta (Hackberry
           petiole gall psyllid)
          Length = 413

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = -2

Query: 389 LNFKWLSCKVVKMSLKPKSLSLVEYNSNKLTSPHLINM*INIFCNRKSNTVF---WLFFL 219
           LNF  L   +  + +    +SL++Y+   L+   ++ M +++  N+  N  F   W+ F 
Sbjct: 21  LNFLMLCFSLSLLFICDDGVSLIKYSMLLLSVWLVLLMFMSVSENKSGNLFFIFFWVLFS 80

Query: 218 VTVRFYLKSSILFQLHF 168
           + + FY K+ + F L F
Sbjct: 81  LEISFYAKTMMFFYLGF 97


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,799,325
Number of Sequences: 1657284
Number of extensions: 11352377
Number of successful extensions: 23502
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23496
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)