Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n23r
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.85 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.5  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = -2

Query: 290 HLINM*INIFCNRKS-NTVFWLFFL--VTVRFYLKSSILFQLHFT*YF*LGIIRYVLCIN 120
           HL+N+  N+    K  N+++ L  L  +TV F L     + + +  +F L  +RYV+ + 
Sbjct: 232 HLVNLHKNLVKVAKDHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFFHLSDVRYVMVVY 291

Query: 119 IV 114
           ++
Sbjct: 292 LL 293


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -2

Query: 230 LFFLVTVRFYLKSSILFQLHFT*YF*LGIIRYVLCINIV 114
           L  L+ + ++ ++ I+F  HF   F L  ++    +N+V
Sbjct: 292 LIILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVV 330



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 373 CPVKL*KCRLNQKAFHS 323
           CPVK  KC ++  + HS
Sbjct: 12  CPVKKRKCTVSNVSLHS 28



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 230 LFFLVTVRFYLKSSILFQLHFT*YF*LGIIRYVLCINIVF 111
           LFFL+ + ++  + I+F +H    F L I  +  C  I+F
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHL--LFLLCIYHF-FCAFIIF 176


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 75  LSLVYSFIVFFLITFLIYSFK 13
           + + Y F++  LI  LI SFK
Sbjct: 177 MDVYYEFLLISLINILIRSFK 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,200
Number of Sequences: 336
Number of extensions: 3448
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)