Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n23r
         (741 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051952-1|AAK93376.1| 1394|Drosophila melanogaster LD42267p pro...    29   5.0  
AE014134-2940|AAF53674.3| 1394|Drosophila melanogaster CG10211-P...    29   5.0  
AE014296-1417|AAF50447.2|  530|Drosophila melanogaster CG7189-PA...    29   6.6  

>AY051952-1|AAK93376.1| 1394|Drosophila melanogaster LD42267p protein.
          Length = 1394

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 733  RYVLFNTSDPRSLRFGNCNLLLISLLFNGCYYTYKPSSS 617
            ++++FN   PR L +   NL  + LL  G Y  Y PS S
Sbjct: 987  QHIVFNEFLPRILSWNAVNLYGLKLLPQGYYKDYNPSCS 1025


>AE014134-2940|AAF53674.3| 1394|Drosophila melanogaster CG10211-PA
            protein.
          Length = 1394

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 733  RYVLFNTSDPRSLRFGNCNLLLISLLFNGCYYTYKPSSS 617
            ++++FN   PR L +   NL  + LL  G Y  Y PS S
Sbjct: 987  QHIVFNEFLPRILSWNAVNLYGLKLLPQGYYKDYNPSCS 1025


>AE014296-1417|AAF50447.2|  530|Drosophila melanogaster CG7189-PA
           protein.
          Length = 530

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +1

Query: 307 LELYSTSERLFGLSDIFTTLQDSHLKFKIWKKYHQKKEP---SSAIPIE*T*LKFNYK 471
           + LY+  ER   ++     L D+H K K+W + +Q+  P   SS  P   + L++ YK
Sbjct: 198 VSLYALKERFEAINATLEELVDTHEKHKLWLRGNQEVPPPLDSSQPPQYDSNLEYLYK 255


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,122,680
Number of Sequences: 53049
Number of extensions: 480326
Number of successful extensions: 934
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)