Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10n22r
(760 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 25 0.66
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 22 6.1
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 22 6.1
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 6.1
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 22 6.1
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 21 8.1
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 21 8.1
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 21 8.1
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 21 8.1
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 21 8.1
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 21 8.1
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 25.0 bits (52), Expect = 0.66
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 531 TKMIV*TFLNYSKKNVI*NLITTQRVTSSSRI 626
TK++V TFL + KK I ++ T+ S+S +
Sbjct: 285 TKLVVVTFLKFIKKIQIFGIMITKACMSASNL 316
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +3
Query: 285 NFI*LNFYGTDLQMIFLQIFKKKYHRS*QVNKYFFY 392
++I L + +DL I +Q+F + + +FY
Sbjct: 288 SYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFY 323
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +3
Query: 285 NFI*LNFYGTDLQMIFLQIFKKKYHRS*QVNKYFFY 392
++I L + +DL I +Q+F + + +FY
Sbjct: 288 SYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFY 323
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 273 FLLSSIYVFLMSV*IVICIFY 211
FLL IY F ++ I++CI+Y
Sbjct: 281 FLLC-IYYFYCALIILLCIYY 300
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +3
Query: 285 NFI*LNFYGTDLQMIFLQIFKKKYHRS*QVNKYFFY 392
++I L + +DL I +Q+F + + +FY
Sbjct: 288 SYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFY 323
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 508 QDTHKIFTFTNHFKKNIDSHS 446
Q+ HK FT +H K ++ H+
Sbjct: 13 QECHKRFTRDHHLKTHMRLHT 33
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 263 LNKNQNIQFHLIKLL 307
LNK++N+QF L+ L
Sbjct: 114 LNKSKNLQFPLLSTL 128
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 21.4 bits (43), Expect = 8.1
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 359 SILTSK*IFFL*ITKFGVDNNNKYREIKDRVRIYVFFKVICESEDFVRILTLFLKMFHKN 538
+IL S+ FF +F DN K R + + VFF VI ++ + LK +
Sbjct: 73 TILFSRSDFF---QQFECDNEPKLRHYLIFIFVNVFFWVIILMSNYAFTRIILLKSVLEI 129
Query: 539 DCIDV 553
ID+
Sbjct: 130 VIIDI 134
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 263 LNKNQNIQFHLIKLL 307
LNK++N+QF L+ L
Sbjct: 114 LNKSKNLQFPLLSTL 128
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 263 LNKNQNIQFHLIKLL 307
LNK++N+QF L+ L
Sbjct: 114 LNKSKNLQFPLLSTL 128
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 508 QDTHKIFTFTNHFKKNIDSHS 446
Q+ HK FT +H K ++ H+
Sbjct: 166 QECHKRFTRDHHLKTHMRLHT 186
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,054
Number of Sequences: 336
Number of extensions: 3880
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -