Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n22r
         (760 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70211-4|CAA94159.1|  825|Caenorhabditis elegans Hypothetical pr...    31   0.89 
U23510-3|AAC46782.1|  340|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC024857-3|AAK31568.6|  611|Caenorhabditis elegans Hypothetical ...    29   3.6  

>Z70211-4|CAA94159.1|  825|Caenorhabditis elegans Hypothetical
           protein K11E4.4 protein.
          Length = 825

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +2

Query: 500 RILTLFLKMFHKNDCIDVP*LL*KKCHLKSDYNTTCDIVFSH*NCIISKLTNFTGECFKG 679
           +IL + L +F     +D+  +  ++ +L   Y   CD+VF   +C I +    T  CF G
Sbjct: 59  KILMILLTIFILIFSLDIVYVCTRQIYLAFSYENDCDLVFETASCSIFRRIALT--CFVG 116

Query: 680 LTCDIF 697
           +T   F
Sbjct: 117 VTTTQF 122


>U23510-3|AAC46782.1|  340|Caenorhabditis elegans Hypothetical
           protein R12C12.3 protein.
          Length = 340

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 425 YYCYQLRTW*FIKKIFIYLLGSMVFFFKY 339
           Y  Y+L++W ++  IFI LLG+   F  Y
Sbjct: 4   YEFYELKSWMYLPVIFIGLLGNFASFLVY 32


>AC024857-3|AAK31568.6|  611|Caenorhabditis elegans Hypothetical
           protein Y71G12A.2 protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 99  FNIIYKTFSYTQSSSSKC 152
           +NI YK F+Y +SS+SKC
Sbjct: 514 WNITYKLFNYLRSSNSKC 531


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,921,571
Number of Sequences: 27780
Number of extensions: 332784
Number of successful extensions: 650
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)