Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n22f
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   6.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   8.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.5  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 43  LSEEKL*IMATSIFKFSSSLI 105
           LS +KL I A  +FK  +SLI
Sbjct: 194 LSNDKLEITACRLFKIDNSLI 214


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 616 RWGTCRSSSATCSRG 572
           RWG  R+SSAT   G
Sbjct: 54  RWGCARASSATTMGG 68


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 331  KAAAKVNIEYGLEKKIADAIMQACDDVISGKLYREGHFPLV 453
            KA  K N+E    +   D + Q  D+V+    + +G  PL+
Sbjct: 1143 KATVKNNVEDNYMEAPQDNVSQPSDEVMENSWFYDG--PLI 1181


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 331  KAAAKVNIEYGLEKKIADAIMQACDDVISGKLYREGHFPLV 453
            KA  K N+E    +   D + Q  D+V+    + +G  PL+
Sbjct: 1143 KATVKNNVEDNYMEAPQDNVSQPSDEVMENSWFYDG--PLI 1181


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 456 DDEGEVTLAVELPADDVIAGL 394
           DDE  V L V+   D  +AGL
Sbjct: 329 DDEESVALKVQFAKDHNMAGL 349


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 20  FLVKFSVTYLKKNYKLWLHPYSNFLHL*LTH 112
           F+V+F   +     KLW   +S F  + + H
Sbjct: 82  FIVRFMKYHFFGTLKLWSQLFSTFAGIEVLH 112


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -1

Query: 508 QSPRSCSCWTEYRS 467
           +SP   SCW ++++
Sbjct: 386 KSPYKASCWAQFKA 399


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -1

Query: 508 QSPRSCSCWTEYRS 467
           +SP   SCW ++++
Sbjct: 386 KSPYKASCWAQFKA 399


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,429
Number of Sequences: 336
Number of extensions: 3547
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)