Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10n19r
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99709-12|CAI79146.1| 349|Caenorhabditis elegans Hypothetical p... 257 5e-69
Z99709-11|CAB16861.1| 347|Caenorhabditis elegans Hypothetical p... 257 5e-69
U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva ... 32 0.37
AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuroni... 32 0.37
U00055-3|AAA50723.3| 693|Caenorhabditis elegans Hypothetical pr... 31 0.64
L14730-1|AAB37563.2| 351|Caenorhabditis elegans Hypothetical pr... 31 1.1
U00056-2|AAN65309.2| 187|Caenorhabditis elegans Hypothetical pr... 30 1.5
U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (dro... 29 2.6
AC024785-1|AAF60598.2| 466|Caenorhabditis elegans C-type lectin... 29 2.6
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 4.5
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 28 6.0
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 28 7.9
X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein. 28 7.9
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 28 7.9
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 28 7.9
AF077537-8|AAC26277.1| 226|Caenorhabditis elegans Hypothetical ... 28 7.9
AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical ... 28 7.9
AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spe... 28 7.9
>Z99709-12|CAI79146.1| 349|Caenorhabditis elegans Hypothetical
protein C47B2.6b protein.
Length = 349
Score = 257 bits (630), Expect = 5e-69
Identities = 115/217 (52%), Positives = 158/217 (72%), Gaps = 2/217 (0%)
Frame = -2
Query: 735 SSCTVYGEPEHLPITETHPTGS-ITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYFNPV 559
SS TVYG P LPITE TG ITN YG+TKY +E++L D+ A+ +WN++ LRYFNPV
Sbjct: 131 SSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNVVLLRYFNPV 190
Query: 558 GAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMDLAS 379
GAH SGLIGEDP NLMP+++QVA+GK PVLT++G ++T DGTG+RDYIHV+DLA
Sbjct: 191 GAHKSGLIGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIHVVDLAK 250
Query: 378 GHVAALNLLSQT-HIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLGDISAM 202
GHV A + + +I ++YNLGTG G SV+++V+ ++V+ +P+K R GD++++
Sbjct: 251 GHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDIPVKIGVPRPGDVASV 310
Query: 201 WADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 91
+ D SLA+E+LGW + +EEMC D W WQT NP G+
Sbjct: 311 YCDPSLAQEKLGWRAETGLEEMCADLWNWQTKNPQGF 347
>Z99709-11|CAB16861.1| 347|Caenorhabditis elegans Hypothetical
protein C47B2.6a protein.
Length = 347
Score = 257 bits (630), Expect = 5e-69
Identities = 115/217 (52%), Positives = 158/217 (72%), Gaps = 2/217 (0%)
Frame = -2
Query: 735 SSCTVYGEPEHLPITETHPTGS-ITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYFNPV 559
SS TVYG P LPITE TG ITN YG+TKY +E++L D+ A+ +WN++ LRYFNPV
Sbjct: 129 SSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNVVLLRYFNPV 188
Query: 558 GAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMDLAS 379
GAH SGLIGEDP NLMP+++QVA+GK PVLT++G ++T DGTG+RDYIHV+DLA
Sbjct: 189 GAHKSGLIGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIHVVDLAK 248
Query: 378 GHVAALNLLSQT-HIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLGDISAM 202
GHV A + + +I ++YNLGTG G SV+++V+ ++V+ +P+K R GD++++
Sbjct: 249 GHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDIPVKIGVPRPGDVASV 308
Query: 201 WADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 91
+ D SLA+E+LGW + +EEMC D W WQT NP G+
Sbjct: 309 YCDPSLAQEKLGWRAETGLEEMCADLWNWQTKNPQGF 345
>U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva
protein 1 protein.
Length = 467
Score = 32.3 bits (70), Expect = 0.37
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 5/204 (2%)
Frame = -2
Query: 735 SSCTVYGEPEHLPITETHPTGSITNVYGRTKYFI-EEMLKDLSAADDKWNIISL---RYF 568
S+ VYG+PE P ET+ G + + R Y + + + L A +K I + R F
Sbjct: 249 STSEVYGDPEVHPQPETY-WGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIF 307
Query: 567 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMD 388
N G + + + +N F+ Q AL KP+ T++G +GT R + +V D
Sbjct: 308 NTFGPR----MHMNDGRVVSN---FIIQ-ALQDKPI-TIYG------NGTQTRSFQYVTD 352
Query: 387 LASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVF-ERVTKAKVPLKYVDRRLGDI 211
L G + +N ++ L V N+G + ++ + + + V + + ++ + D
Sbjct: 353 LVDGLIKLMN----SNYSLPV-NIGNPEEHTIGQFATIIRDLVPGSTSEIVNLESQQDDP 407
Query: 210 SAMWADTSLAKEELGWSTQLTIEE 139
D A E++ W+ Q+ +++
Sbjct: 408 QQRRPDIRRAAEQISWAPQVHMKD 431
>AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuronic
acid decarboxylase protein.
Length = 467
Score = 32.3 bits (70), Expect = 0.37
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 5/204 (2%)
Frame = -2
Query: 735 SSCTVYGEPEHLPITETHPTGSITNVYGRTKYFI-EEMLKDLSAADDKWNIISL---RYF 568
S+ VYG+PE P ET+ G + + R Y + + + L A +K I + R F
Sbjct: 249 STSEVYGDPEVHPQPETY-WGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIF 307
Query: 567 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMD 388
N G + + + +N F+ Q AL KP+ T++G +GT R + +V D
Sbjct: 308 NTFGPR----MHMNDGRVVSN---FIIQ-ALQDKPI-TIYG------NGTQTRSFQYVTD 352
Query: 387 LASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVF-ERVTKAKVPLKYVDRRLGDI 211
L G + +N ++ L V N+G + ++ + + + V + + ++ + D
Sbjct: 353 LVDGLIKLMN----SNYSLPV-NIGNPEEHTIGQFATIIRDLVPGSTSEIVNLESQQDDP 407
Query: 210 SAMWADTSLAKEELGWSTQLTIEE 139
D A E++ W+ Q+ +++
Sbjct: 408 QQRRPDIRRAAEQISWAPQVHMKD 431
>U00055-3|AAA50723.3| 693|Caenorhabditis elegans Hypothetical
protein R02F2.7 protein.
Length = 693
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 309 GKGVSVKELVNVFERVTKAKVPLKYVDRRLGDISAMWADTSLAKEE 172
GKG + ++ VF++V + P+K+V+R D++ + A E
Sbjct: 409 GKGSENENILKVFKKVAQEAAPVKFVNRTAADVAEKLREPEFAVAE 454
>L14730-1|AAB37563.2| 351|Caenorhabditis elegans Hypothetical
protein C13G5.2 protein.
Length = 351
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 466 TCAHRFRNRLQHSRWNWYSRLHTRHGF 386
TC RF N+ Q S W+ +L T H F
Sbjct: 325 TCCTRFNNKRQDSVDYWFKKLETNHDF 351
>U00056-2|AAN65309.2| 187|Caenorhabditis elegans Hypothetical
protein R05H11.2 protein.
Length = 187
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 735 SSCT-VYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKD 616
S C+ V G P +T + P + N+Y R K +I E+ KD
Sbjct: 69 SDCSSVSGSPSSSTMTSSPPPQNFFNIYDRLKEYISEVPKD 109
>U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin
(drosophila neuroligin-like) homolog protein 1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 175 RTRMVHSINYRRDVYGFLAMADNESRRIPEKDQ 77
R +V ++NYR +GF++M D+E+ +DQ
Sbjct: 217 RGMVVVTVNYRLGAFGFMSMGDSETGNYGLQDQ 249
>AC024785-1|AAF60598.2| 466|Caenorhabditis elegans C-type lectin
protein 70 protein.
Length = 466
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 412 NTSSIGSVVVGSENGEHRFLAESNLREEWHEVGE 513
N S +G +GS+NG + + ES +W+ +G+
Sbjct: 104 NGSPVGYTNLGSQNGNNLYFTESLANTKWNTLGD 137
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 340 YQTKGLQSGYRQRSFSQRISERIRKSHKSQSATQVRRSKTWRHQ 209
++T GL Y+ Q ++ R+R+S + Q+ RSK R Q
Sbjct: 59 HRTDGLWDEYKNFQNLQGVTGRLRRSTNKRHTGQMNRSKKMRRQ 102
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -2
Query: 261 TKAKVPLKYVDRRLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGYPKK 82
+K +PLK V+ R +I A T L KE T+L +D + PDG
Sbjct: 93 SKTLIPLKDVEARK-EIEGKIAFTDLKKEVTQNWTELVQSNRVSDQLIFPLTKPDGIMWG 151
Query: 81 TKKTEIVVNGK 49
+KTE V+ K
Sbjct: 152 DEKTEPVLTEK 162
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 59 TTISVFLVFFGYPSGFIVCHRQ 124
TTISV L+ FG + VCH++
Sbjct: 171 TTISVVLIIFGTVQDYEVCHKE 192
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical protein
ZK512.3 protein.
Length = 1418
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 332 SLIWVWLSKFNAATCPLAKSMTCM*SRIPVP 424
+L W+WLS F L++S TC S + P
Sbjct: 931 TLSWIWLSLFTTDLSNLSESETCRKSFLGAP 961
>X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein.
Length = 557
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 166 MVHSINYRRDVYGFLAMADN 107
+V SINYR V+GFL DN
Sbjct: 151 VVVSINYRLGVFGFLTTGDN 170
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 301 SFSQRISERIRKSHK-SQSATQVRRSKTWRHQRHVGG 194
S QR R R S+K S+S ++V R K WR + GG
Sbjct: 1468 SMLQRSRHRSRGSYKISESKSKVVRGKDWRWEDQDGG 1504
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 332 SLIWVWLSKFNAATCPLAKSMTCM*SRIPVP 424
+L W+WLS F L++S TC S + P
Sbjct: 540 TLSWIWLSLFTTDLSNLSESETCRKSFLGAP 570
>AF077537-8|AAC26277.1| 226|Caenorhabditis elegans Hypothetical
protein F16G10.9 protein.
Length = 226
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 224 LRSTYLSGTLAFVTLSNTFTNSLTETP---LPVPRL*TFSLIWVWLSKFNAATCP 379
+ ST G ++ +T +T++ TE P L + L F L+ L K +AATCP
Sbjct: 55 VESTMAPG-VSTMTPGGIYTSAETEAPEVILQLTNLSKFQLVSEQLCKISAATCP 108
>AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical
protein F13H6.3 protein.
Length = 554
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 166 MVHSINYRRDVYGFLAMADN 107
+V SINYR V+GFL DN
Sbjct: 151 VVVSINYRLGVFGFLTTGDN 170
>AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective
spermatogenesis protein 8 protein.
Length = 512
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 408 DYIHVMDLASGHVAALNLLSQTHIRLKVYNLGTG-KGVSVKE 286
DY+H + +AA N L + LK+ + G KGV++KE
Sbjct: 333 DYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKGVAIKE 374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,545,090
Number of Sequences: 27780
Number of extensions: 393062
Number of successful extensions: 1276
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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