Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10n19f
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99709-11|CAB16861.1| 347|Caenorhabditis elegans Hypothetical p... 142 2e-34
Z99709-12|CAI79146.1| 349|Caenorhabditis elegans Hypothetical p... 138 4e-33
U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva ... 55 5e-08
AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuroni... 55 5e-08
U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U40953-3|AAB52650.1| 342|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U40939-5|AAA81703.3| 343|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U64862-7|AAB52622.1| 374|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL032655-6|CAA21722.1| 462|Caenorhabditis elegans Hypothetical ... 32 0.37
Z81553-5|CAB04494.1| 382|Caenorhabditis elegans Hypothetical pr... 30 1.5
AM231685-1|CAJ77754.1| 375|Caenorhabditis elegans GDP-mannose 4... 30 1.5
U64847-1|AAN84827.1| 358|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical p... 29 2.6
Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical p... 29 2.6
Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical p... 29 2.6
Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical p... 29 2.6
Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical pr... 29 2.6
AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose 4... 29 2.6
AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose 4... 29 2.6
AC024798-6|AAK29913.1| 356|Caenorhabditis elegans Hypothetical ... 29 2.6
Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical p... 28 4.5
Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical p... 28 4.5
Z82078-5|CAB04943.1| 148|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL117202-10|CAB57893.1| 136|Caenorhabditis elegans Hypothetical... 27 7.9
>Z99709-11|CAB16861.1| 347|Caenorhabditis elegans Hypothetical
protein C47B2.6a protein.
Length = 347
Score = 142 bits (343), Expect = 2e-34
Identities = 71/157 (45%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
Frame = +3
Query: 144 NILVTGGAGYIGSHCVVTLLEAGHEVIAIDNFTNSVEDEDGSP-ALQRAEKITGKKITFY 320
+ILVTG AG+IGSH V+ LL +G+ V+ IDNF N++ DE G+ +L+R ++TGK + F
Sbjct: 2 HILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISDEHGNAISLKRVAQLTGKDVPFQ 61
Query: 321 KADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSHN 500
D+ D+ + +F ++ D +IH AALKAVGES+ LNL+++ +N
Sbjct: 62 NVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKYN 121
Query: 501 CYQMVFSSSCTVYGEPEHLPITETHPTG-SITNVYGR 608
VFSSS TVYG P LPITE TG ITN YG+
Sbjct: 122 VKNFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQ 158
>Z99709-12|CAI79146.1| 349|Caenorhabditis elegans Hypothetical
protein C47B2.6b protein.
Length = 349
Score = 138 bits (333), Expect = 4e-33
Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 4/159 (2%)
Frame = +3
Query: 144 NILVTGGAGYIGSHCVVTLLEAGHEVIAIDNFTN--SVEDEDGSP-ALQRAEKITGKKIT 314
+ILVTG AG+IGSH V+ LL +G+ V+ IDNF N SV DE G+ +L+R ++TGK +
Sbjct: 2 HILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKDVP 61
Query: 315 FYKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRS 494
F D+ D+ + +F ++ D +IH AALKAVGES+ LNL+++
Sbjct: 62 FQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLK 121
Query: 495 HNCYQMVFSSSCTVYGEPEHLPITETHPTG-SITNVYGR 608
+N VFSSS TVYG P LPITE TG ITN YG+
Sbjct: 122 YNVKNFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQ 160
>U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva
protein 1 protein.
Length = 467
Score = 54.8 bits (126), Expect = 5e-08
Identities = 42/145 (28%), Positives = 67/145 (46%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAIDNFTNSVEDEDGSPALQRAEKITGKKITFY 320
K IL+TGGAG++GSH V L+ GHEVIA+DN+ +K I
Sbjct: 137 KRILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTG------------RKKNVEHWIGHP 184
Query: 321 KADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSHN 500
+++ +N F + VD + H A+ + M G +N+L + +
Sbjct: 185 NFEMVHHDVVNPYFVE--VDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRVK 242
Query: 501 CYQMVFSSSCTVYGEPEHLPITETH 575
++ +S+ VYG+PE P ET+
Sbjct: 243 A-TVLLASTSEVYGDPEVHPQPETY 266
>AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuronic
acid decarboxylase protein.
Length = 467
Score = 54.8 bits (126), Expect = 5e-08
Identities = 42/145 (28%), Positives = 67/145 (46%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAIDNFTNSVEDEDGSPALQRAEKITGKKITFY 320
K IL+TGGAG++GSH V L+ GHEVIA+DN+ +K I
Sbjct: 137 KRILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTG------------RKKNVEHWIGHP 184
Query: 321 KADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSHN 500
+++ +N F + VD + H A+ + M G +N+L + +
Sbjct: 185 NFEMVHHDVVNPYFVE--VDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRVK 242
Query: 501 CYQMVFSSSCTVYGEPEHLPITETH 575
++ +S+ VYG+PE P ET+
Sbjct: 243 A-TVLLASTSEVYGDPEVHPQPETY 266
>U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical
protein C01F1.3a protein.
Length = 631
Score = 44.0 bits (99), Expect = 9e-05
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAIDNFTNSVEDEDGSPALQRAEKI-TGKKITF 317
KN+++TGG G+IGS+ V + H+ NF N + S AE + +
Sbjct: 6 KNVVITGGCGFIGSNFVNYI----HDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKL 61
Query: 318 YKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSH 497
D+ ++ I +F+++ +D VIHFAA + LE +R++
Sbjct: 62 VLTDIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTY 121
Query: 498 -NCYQMVFSSSCTVYGEPE 551
+ V S+ VYG+ +
Sbjct: 122 GKIKRFVHISTDEVYGDSD 140
>U40953-3|AAB52650.1| 342|Caenorhabditis elegans Hypothetical
protein F53B1.4 protein.
Length = 342
Score = 44.0 bits (99), Expect = 9e-05
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Frame = +3
Query: 147 ILVTGGAGYIGSHCVVTLLEAGHEVIAIDNFTNSVEDEDGSPALQRAEKIT-GKKITFYK 323
+L+TGG G+IGS+ + F N + G+ L ++I + F +
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNT----KFINYDKLAFGASPLHVEKEIRESPRYKFVE 66
Query: 324 ADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE-IMRS-- 494
A L D+P + ++ VD VIHFAA+ V ES LLE I+ S
Sbjct: 67 AALEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPY 126
Query: 495 HNCYQMVFSSSCTVYGE--PEHLPITETHPTGSITNVY 602
++V S+ VYG+ + P +E+ + TN Y
Sbjct: 127 KGVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPY 164
>U40939-5|AAA81703.3| 343|Caenorhabditis elegans Hypothetical
protein F13D11.4 protein.
Length = 343
Score = 43.2 bits (97), Expect = 1e-04
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Frame = +3
Query: 147 ILVTGGAGYIGSHCVVTLLEAGHEVIAIDNFTNSVEDEDGSPALQRAEKITGKK-ITFYK 323
+LVTG +G+IG+HCV LL+ G+ V +V D + +Q +K+ K + +
Sbjct: 8 VLVTGASGFIGTHCVEILLKNGYRV------RGTVRDLNNKAKVQPIKKLDKKNHLELVE 61
Query: 324 ADLLDKPQINAIFDKHPVDC--VIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE-IMRS 494
ADLLD + + K C V+H A+ + G +N+L+ I
Sbjct: 62 ADLLD----STCWKKAVAGCDYVLHVASPFPI----VSDERCITTAVEGTMNVLKAIAED 113
Query: 495 HNCYQMVFSSSCTVYGE 545
N ++V +SSC E
Sbjct: 114 GNVRKLVLTSSCAAVNE 130
>U64862-7|AAB52622.1| 374|Caenorhabditis elegans Hypothetical
protein ZC8.1 protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.21
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 4/147 (2%)
Frame = +3
Query: 150 LVTGGAGYIGSHCVVTLLEAG--HEVIAIDNFTNSVEDEDGSPALQRAEKITGKKITFYK 323
++ GG G++G+H + L + G +I + D P + KI I++ K
Sbjct: 5 VIVGGGGFLGAHVISALQKIGCKERIIVV----------DPCPQEFKTIKIDKSNISYIK 54
Query: 324 ADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSHNC 503
A LD + I + V+H AA+ G G L++ ++
Sbjct: 55 ASFLDDKVLENIL--NGASAVVHLAAVGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALGV 112
Query: 504 YQMVFSSSCTV--YGEPEHLPITETHP 578
+ +++SS V GEP +TE P
Sbjct: 113 KRFLYASSVAVSFIGEPLD-NVTEDDP 138
>AL032655-6|CAA21722.1| 462|Caenorhabditis elegans Hypothetical
protein Y6B3B.11 protein.
Length = 462
Score = 31.9 bits (69), Expect = 0.37
Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 23/180 (12%)
Frame = +3
Query: 132 PRFKNILVTGGAGYIGSHCVVTLLEAGHEVIAIDNFTNSVEDEDGSPALQRAEKITGKKI 311
PR +L+TGGAG++ + V L E + I +E E + + +K K++
Sbjct: 42 PRPWKVLITGGAGHLAENLVAKLEEMTRDSIR-PKIREMLEKEMPAVISTKVDKEVEKRL 100
Query: 312 TFY-KADLLD--KPQ----------INAIFDKH--------PVDCVIHFAALKAVGESMX 428
Y + L+D +P+ + FD VD V H AA+ G+
Sbjct: 101 PMYIQIVLVDVLEPRGRVLKHHVAFVKCSFDDECTMKTALEQVDTVYHLAAVGMTGQYAR 160
Query: 429 XXXXXXXXXXXGMLNLLEIMRSHNCYQMVFSSSCTVY--GEPEHLPITETHPTGSITNVY 602
G +NLL R+ + +++SS V GEP + E N Y
Sbjct: 161 DRKACMDINAVGTMNLLIWARNSGVQRFIYTSSVGVVFSGEPMYNATEEVGYPDDFYNYY 220
>Z81553-5|CAB04494.1| 382|Caenorhabditis elegans Hypothetical
protein F56H6.5 protein.
Length = 382
Score = 29.9 bits (64), Expect = 1.5
Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 9/155 (5%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAI----DNF-TNSVEDEDGSPALQRAEKITGK 305
K L+TG G GS+ LL G++V I +F T +E G+P
Sbjct: 34 KVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNG----SA 89
Query: 306 KITFYKADLLDKP-QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE 482
+ + D+ D I I P + + H AA V S G L LL+
Sbjct: 90 SFSLHYGDMTDSSCLIKLISTIEPTE-IYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD 148
Query: 483 IMRSHNCYQMV---FSSSCTVYGEPEHLPITETHP 578
+ + + V +S+ +YG+ + +P +E P
Sbjct: 149 AIHACRLTEKVRFYQASTSELYGKVQEIPQSELTP 183
>AM231685-1|CAJ77754.1| 375|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 375
Score = 29.9 bits (64), Expect = 1.5
Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 9/155 (5%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAI----DNF-TNSVEDEDGSPALQRAEKITGK 305
K L+TG G GS+ LL G++V I +F T +E G+P
Sbjct: 27 KVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNG----SA 82
Query: 306 KITFYKADLLDKP-QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE 482
+ + D+ D I I P + + H AA V S G L LL+
Sbjct: 83 SFSLHYGDMTDSSCLIKLISTIEPTE-IYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD 141
Query: 483 IMRSHNCYQMV---FSSSCTVYGEPEHLPITETHP 578
+ + + V +S+ +YG+ + +P +E P
Sbjct: 142 AIHACRLTEKVRFYQASTSELYGKVQEIPQSELTP 176
>U64847-1|AAN84827.1| 358|Caenorhabditis elegans Hypothetical
protein F08F3.4 protein.
Length = 358
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +3
Query: 327 DLLDKPQINAIFDKHPVDCVIHFAA-LKAVGESMXXXXXXXXXXXXGMLNLLEIMRSHNC 503
D+L++ I I +D ++HF+A L AVGE+ G+ N+L++ H
Sbjct: 88 DILNQGSIEEIVVNKNIDTIVHFSALLSAVGET--NVPLALQVNCRGVENILQVAAKHK- 144
Query: 504 YQMVFSSSCTVYGEPEHLPITETHPTGSITNVYG 605
++ S+ +G T T +YG
Sbjct: 145 LKVFIPSTIGAFGPTTPRENTPDLTVQCPTTIYG 178
>Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical
protein C53B4.7e protein.
Length = 394
Score = 29.1 bits (62), Expect = 2.6
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAI----DNF-TNSVEDEDGSPALQRAEKITGK 305
K L+TG +G GS+ LL G++V I +F T +E +P +
Sbjct: 46 KVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGD----S 101
Query: 306 KITFYKADLLDKP-QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE 482
+ + D+ D I I P + V H AA V S G L LL+
Sbjct: 102 SFSLHYGDMTDSSCLIKLISTIEPTE-VYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD 160
Query: 483 IMRSHNCYQMV---FSSSCTVYGEPEHLPITETHP 578
+ + + V +S+ +YG+ + +P +E P
Sbjct: 161 AIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTP 195
>Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical
protein C53B4.7d protein.
Length = 382
Score = 29.1 bits (62), Expect = 2.6
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAI----DNF-TNSVEDEDGSPALQRAEKITGK 305
K L+TG +G GS+ LL G++V I +F T +E +P +
Sbjct: 34 KVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGD----S 89
Query: 306 KITFYKADLLDKP-QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE 482
+ + D+ D I I P + V H AA V S G L LL+
Sbjct: 90 SFSLHYGDMTDSSCLIKLISTIEPTE-VYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD 148
Query: 483 IMRSHNCYQMV---FSSSCTVYGEPEHLPITETHP 578
+ + + V +S+ +YG+ + +P +E P
Sbjct: 149 AIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTP 183
>Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical
protein C53B4.7c protein.
Length = 368
Score = 29.1 bits (62), Expect = 2.6
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAI----DNF-TNSVEDEDGSPALQRAEKITGK 305
K L+TG +G GS+ LL G++V I +F T +E +P +
Sbjct: 20 KVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGD----S 75
Query: 306 KITFYKADLLDKP-QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE 482
+ + D+ D I I P + V H AA V S G L LL+
Sbjct: 76 SFSLHYGDMTDSSCLIKLISTIEPTE-VYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD 134
Query: 483 IMRSHNCYQMV---FSSSCTVYGEPEHLPITETHP 578
+ + + V +S+ +YG+ + +P +E P
Sbjct: 135 AIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTP 169
>Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical
protein C53B4.7b protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.6
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAI----DNF-TNSVEDEDGSPALQRAEKITGK 305
K L+TG +G GS+ LL G++V I +F T +E +P +
Sbjct: 51 KVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGD----S 106
Query: 306 KITFYKADLLDKP-QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE 482
+ + D+ D I I P + V H AA V S G L LL+
Sbjct: 107 SFSLHYGDMTDSSCLIKLISTIEPTE-VYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD 165
Query: 483 IMRSHNCYQMV---FSSSCTVYGEPEHLPITETHP 578
+ + + V +S+ +YG+ + +P +E P
Sbjct: 166 AIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTP 200
>Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical
protein C53B4.7a protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.6
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAI----DNF-TNSVEDEDGSPALQRAEKITGK 305
K L+TG +G GS+ LL G++V I +F T +E +P +
Sbjct: 36 KVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGD----S 91
Query: 306 KITFYKADLLDKP-QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE 482
+ + D+ D I I P + V H AA V S G L LL+
Sbjct: 92 SFSLHYGDMTDSSCLIKLISTIEPTE-VYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD 150
Query: 483 IMRSHNCYQMV---FSSSCTVYGEPEHLPITETHP 578
+ + + V +S+ +YG+ + +P +E P
Sbjct: 151 AIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTP 185
>AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.6
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAI----DNF-TNSVEDEDGSPALQRAEKITGK 305
K L+TG +G GS+ LL G++V I +F T +E +P +
Sbjct: 36 KVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGD----S 91
Query: 306 KITFYKADLLDKP-QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE 482
+ + D+ D I I P + V H AA V S G L LL+
Sbjct: 92 SFSLHYGDMTDSSCLIKLISTIEPTE-VYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD 150
Query: 483 IMRSHNCYQMV---FSSSCTVYGEPEHLPITETHP 578
+ + + V +S+ +YG+ + +P +E P
Sbjct: 151 AIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTP 185
>AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.6
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIAI----DNF-TNSVEDEDGSPALQRAEKITGK 305
K L+TG +G GS+ LL G++V I +F T +E +P +
Sbjct: 51 KVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGD----S 106
Query: 306 KITFYKADLLDKP-QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLE 482
+ + D+ D I I P + V H AA V S G L LL+
Sbjct: 107 SFSLHYGDMTDSSCLIKLISTIEPTE-VYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD 165
Query: 483 IMRSHNCYQMV---FSSSCTVYGEPEHLPITETHP 578
+ + + V +S+ +YG+ + +P +E P
Sbjct: 166 AIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTP 200
>AC024798-6|AAK29913.1| 356|Caenorhabditis elegans Hypothetical
protein Y48G9A.11 protein.
Length = 356
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 11 CEHELLARKIVISLIINRTIAVKLVYGRFKVNGSKKLRNNA 133
C HE L + +S I+ + IA L+ G +KLR N+
Sbjct: 258 CGHEHLVNNLPLSTIVRKEIATLLIRGETPEEIVEKLRKNS 298
>Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIA 227
K ILVTG + IG ++L +AG +VIA
Sbjct: 10 KRILVTGASQGIGKEICLSLAKAGAQVIA 38
>Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 141 KNILVTGGAGYIGSHCVVTLLEAGHEVIA 227
K ILVTG + IG ++L +AG +VIA
Sbjct: 10 KRILVTGASQGIGKEICLSLAKAGAQVIA 38
>Z82078-5|CAB04943.1| 148|Caenorhabditis elegans Hypothetical
protein W09D6.4 protein.
Length = 148
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 243 NSVEDEDGSPALQRAEKITGKKITFYKADLLDKPQINAIFDKHPVDCVIHFAAL 404
+ + D + P + +AE I+ + K L DK I+A KH + HFA +
Sbjct: 37 DQINDYNNDPHIIKAE-ISAPDVVVNKYTLQDK-DISAALKKHVAEAAAHFATM 88
>AL117202-10|CAB57893.1| 136|Caenorhabditis elegans Hypothetical
protein Y47D3A.13 protein.
Length = 136
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 249 VEDEDGSPALQRAEKITGKKITFYKADLLDKPQINAIFDKHPVDCVIHFAAL 404
+ D + P + +AE I+ + K L DK I+A KH + HFA +
Sbjct: 27 INDYNNDPHIIKAE-ISAPDVVVNKYTLQDK-NISAALKKHVAEAAAHFATM 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,338,272
Number of Sequences: 27780
Number of extensions: 261072
Number of successful extensions: 758
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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