Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n18r
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   6.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.0  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 486 CTAGSYRYVLIVQESFSAPPLN 551
           CT   Y Y  I  E+F A PLN
Sbjct: 50  CTHLIYGYAGINAETFKAQPLN 71


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 134 RSAPATHAHVLHELSHII 187
           RSAP+TH  +L  L  ++
Sbjct: 106 RSAPSTHEELLEVLKKVV 123


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
 Frame = -1

Query: 474 EAGSSVEGCPLRTG---GLLTCYRGASPAPPPVLALQVDVTDAP 352
           E GS  EG  L      G +T    ASPAPP   A      D P
Sbjct: 18  EEGSPEEGDKLEGDEDTGSMTPNSAASPAPPEEEAASPTPGDVP 61


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 486 CTAGSYRYVLIVQESFSAPPLN 551
           CT   Y Y  I +E++   PLN
Sbjct: 55  CTHLIYGYAAIDEETYKLTPLN 76


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 270 APRAGLTPLTSAACTNEAA 326
           AP++  TP++S+  T+ AA
Sbjct: 14  APQSAATPISSSGMTSPAA 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,328
Number of Sequences: 336
Number of extensions: 2590
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)