Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10n18f
(643 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17; E... 142 6e-33
UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8; Coel... 129 5e-29
UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;... 124 1e-27
UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus l... 96 6e-19
UniRef50_O77245 Cluster: Nuclear hormone receptor E75; n=9; Coel... 95 1e-18
UniRef50_A1IID9 Cluster: Ecdysone-induced protein 75; n=3; Eukar... 44 0.004
UniRef50_P20393 Cluster: Orphan nuclear receptor NR1D1; n=25; Th... 40 0.067
UniRef50_Q4RW38 Cluster: Chromosome 9 SCAF14991, whole genome sh... 39 0.089
UniRef50_Q6TNS3 Cluster: Nuclear receptor subfamily 1, group D, ... 38 0.16
UniRef50_Q9XUK7 Cluster: Nuclear hormone receptor family member ... 38 0.21
UniRef50_Q4RXZ3 Cluster: Chromosome 11 SCAF14979, whole genome s... 36 0.83
UniRef50_UPI00004D0DA7 Cluster: Orphan nuclear receptor NR1D2 (R... 36 1.1
UniRef50_Q14995 Cluster: Orphan nuclear receptor NR1D2; n=48; Eu... 36 1.1
UniRef50_Q90Z63 Cluster: Rev-Erb beta; n=3; Euteleostei|Rep: Rev... 34 2.5
UniRef50_Q1L684 Cluster: Rev-erbgamma-A; n=7; Clupeocephala|Rep:... 34 2.5
UniRef50_UPI0000F1EFB0 Cluster: PREDICTED: similar to Rev-Erb be... 34 3.4
UniRef50_Q90Z65 Cluster: Rev-Erb beta 1; n=5; Euteleostomi|Rep: ... 34 3.4
UniRef50_A0UJN9 Cluster: Putative uncharacterized protein precur... 33 4.4
UniRef50_Q4Q766 Cluster: Putative uncharacterized protein; n=4; ... 33 4.4
UniRef50_A1DYE6 Cluster: Nuclear receptor-like protein; n=1; Tri... 33 4.4
>UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17;
Endopterygota|Rep: Ecdysone-inducible protein E75 -
Galleria mellonella (Wax moth)
Length = 711
Score = 142 bits (344), Expect = 6e-33
Identities = 70/77 (90%), Positives = 73/77 (94%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
VRFGRVPKREKARILAAMQ SS++RAHEQAAAAELDD PRLLARVVRAHLDTCEFTRDRV
Sbjct: 118 VRFGRVPKREKARILAAMQ-SSTTRAHEQAAAAELDDGPRLLARVVRAHLDTCEFTRDRV 176
Query: 591 ASMRARARDCPTYSQPT 641
A+MR ARDCPTYSQPT
Sbjct: 177 AAMRNGARDCPTYSQPT 193
>UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8;
Coelomata|Rep: Ecdysone-induced protein 75C - Aedes
aegypti (Yellowfever mosquito)
Length = 1134
Score = 129 bits (312), Expect = 5e-29
Identities = 59/77 (76%), Positives = 68/77 (88%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
VRFGRVPKREKARILAAMQQS+ +R +++A A ELDD PRLLA V+RAH+DTCEFTR++V
Sbjct: 335 VRFGRVPKREKARILAAMQQSTQNRGNQRALATELDDQPRLLAAVLRAHMDTCEFTREKV 394
Query: 591 ASMRARARDCPTYSQPT 641
SMR RARDCPTYS PT
Sbjct: 395 TSMRQRARDCPTYSMPT 411
>UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;
n=10; Coelomata|Rep: Ecdysone-induced protein 75B
isoform B - Drosophila melanogaster (Fruit fly)
Length = 1412
Score = 124 bits (300), Expect = 1e-27
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
VRFGRVPKREKARILAAMQQS+ +R ++A A ELDD PRLLA V+RAHL+TCEFT+++V
Sbjct: 529 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTKEKV 588
Query: 591 ASMRARARDCPTYSQPT 641
++MR RARDCP+YS PT
Sbjct: 589 SAMRQRARDCPSYSMPT 605
>UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus
lateralis|Rep: E75 nuclear receptor - Gecarcinus
lateralis (Blackback land crab)
Length = 828
Score = 96.3 bits (229), Expect = 6e-19
Identities = 46/75 (61%), Positives = 61/75 (81%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
VRFGRVPKREKA+ILAAMQ S ++R+ E+A AEL+D R+ A ++RAH+DTC+FTRD+V
Sbjct: 103 VRFGRVPKREKAKILAAMQ-SVNARSQERAVLAELEDDTRVTAAIIRAHMDTCDFTRDKV 161
Query: 591 ASMRARARDCPTYSQ 635
A M +AR P+Y+Q
Sbjct: 162 APMLQQARAHPSYTQ 176
>UniRef50_O77245 Cluster: Nuclear hormone receptor E75; n=9;
Coelomata|Rep: Nuclear hormone receptor E75 -
Metapenaeus ensis (Greasyback shrimp) (Sand shrimp)
Length = 606
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/75 (60%), Positives = 61/75 (81%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
VRFGRVPKREKA+ILAAMQ S ++++ E+A AEL+D R+ A ++RAH+DTC+FTRD+V
Sbjct: 103 VRFGRVPKREKAKILAAMQ-SVNAKSQERAVLAELEDDTRVTAAIIRAHMDTCDFTRDKV 161
Query: 591 ASMRARARDCPTYSQ 635
A M +AR P+Y+Q
Sbjct: 162 APMLQQARTHPSYTQ 176
>UniRef50_A1IID9 Cluster: Ecdysone-induced protein 75; n=3;
Eukaryota|Rep: Ecdysone-induced protein 75 - Apis
mellifera (Honeybee)
Length = 21
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 345 MGEDLPILKGILNGVVKYHNA 407
MG++LPILKGILNGVV YHNA
Sbjct: 1 MGDELPILKGILNGVVNYHNA 21
>UniRef50_P20393 Cluster: Orphan nuclear receptor NR1D1; n=25;
Theria|Rep: Orphan nuclear receptor NR1D1 - Homo sapiens
(Human)
Length = 614
Score = 39.5 bits (88), Expect = 0.067
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 527
VRFGR+PKREK R+LA MQ + + ++ ++ L+ +P
Sbjct: 203 VRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241
>UniRef50_Q4RW38 Cluster: Chromosome 9 SCAF14991, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
SCAF14991, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 539
Score = 39.1 bits (87), Expect = 0.089
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 527
VRFGR+PKREK R+L MQ +S ++A E+D P
Sbjct: 120 VRFGRIPKREKQRLLEEMQSYMNSL--NESAVMEMDSCP 156
>UniRef50_Q6TNS3 Cluster: Nuclear receptor subfamily 1, group D,
member 1; n=8; Clupeocephala|Rep: Nuclear receptor
subfamily 1, group D, member 1 - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 637
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQ 497
VRFGR+PKREK R+LA MQ + ++ + Q
Sbjct: 199 VRFGRIPKREKQRMLAEMQNAMNNMVNNQ 227
>UniRef50_Q9XUK7 Cluster: Nuclear hormone receptor family member
nhr-85; n=3; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-85 - Caenorhabditis elegans
Length = 514
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAA 503
VRFGRVPKREKAR+ MQ+++ +Q A
Sbjct: 184 VRFGRVPKREKARMFEEMQKTNVQSQRDQIA 214
>UniRef50_Q4RXZ3 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 720
Score = 35.9 bits (79), Expect = 0.83
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 527
VRFGR+PKREK R+L MQ +S ++A+ +++ +P
Sbjct: 312 VRFGRIPKREKQRLLDEMQSYMNSL--NESASVDMEMSP 348
>UniRef50_UPI00004D0DA7 Cluster: Orphan nuclear receptor NR1D2
(Rev-erb-beta) (EAR-1R) (Orphan nuclear hormone receptor
BD73).; n=1; Xenopus tropicalis|Rep: Orphan nuclear
receptor NR1D2 (Rev-erb-beta) (EAR-1R) (Orphan nuclear
hormone receptor BD73). - Xenopus tropicalis
Length = 571
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 521
VRFGR+PKREK R+L MQ + Q + + L +
Sbjct: 190 VRFGRIPKREKQRMLIEMQTVMKTMMSNQFSGSSLQE 226
>UniRef50_Q14995 Cluster: Orphan nuclear receptor NR1D2; n=48;
Euteleostomi|Rep: Orphan nuclear receptor NR1D2 - Homo
sapiens (Human)
Length = 579
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQ 497
VRFGR+PKREK R+L MQ + + + Q
Sbjct: 174 VRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202
>UniRef50_Q90Z63 Cluster: Rev-Erb beta; n=3; Euteleostei|Rep:
Rev-Erb beta - Oncorhynchus mykiss (Rainbow trout)
(Salmo gairdneri)
Length = 461
Score = 34.3 bits (75), Expect = 2.5
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSS 482
VRFGR+PKREK R+L MQ + ++
Sbjct: 48 VRFGRIPKREKQRMLLEMQNAMNN 71
>UniRef50_Q1L684 Cluster: Rev-erbgamma-A; n=7; Clupeocephala|Rep:
Rev-erbgamma-A - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 462
Score = 34.3 bits (75), Expect = 2.5
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSS 482
VRFGR+PKREK R+L MQ +S
Sbjct: 77 VRFGRIPKREKQRLLDEMQSYMNS 100
>UniRef50_UPI0000F1EFB0 Cluster: PREDICTED: similar to Rev-Erb beta
1; n=1; Danio rerio|Rep: PREDICTED: similar to Rev-Erb
beta 1 - Danio rerio
Length = 504
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSS 482
VRFGR+PKREK R+L MQ + ++
Sbjct: 157 VRFGRIPKREKQRMLLEMQTAMNN 180
>UniRef50_Q90Z65 Cluster: Rev-Erb beta 1; n=5; Euteleostomi|Rep:
Rev-Erb beta 1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 404
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSS 482
VRFGR+PKREK R+L MQ + ++
Sbjct: 73 VRFGRIPKREKQRMLLEMQTAMNN 96
>UniRef50_A0UJN9 Cluster: Putative uncharacterized protein precursor;
n=1; Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein precursor - Burkholderia
multivorans ATCC 17616
Length = 1690
Score = 33.5 bits (73), Expect = 4.4
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 435 REKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAH-LDTCEFTRD-RVASMRAR 608
R +AR AA + ++ R H A A LDD PR LA RAH D E RD RV
Sbjct: 852 RSRARRAAAADRVAAGRHHGDARARPLDDDPR-LAEGHRAHAADRGEPRRDGRVPVPAQL 910
Query: 609 ARD 617
ARD
Sbjct: 911 ARD 913
>UniRef50_Q4Q766 Cluster: Putative uncharacterized protein; n=4;
cellular organisms|Rep: Putative uncharacterized protein
- Leishmania major
Length = 1696
Score = 33.5 bits (73), Expect = 4.4
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 381 NGVVKYHNAPVRFGRVPKREKARILAAMQQSSSSRAHE--QAAAAELDDAPRLLARVVRA 554
NGVV H AP+R P ++ ++ S S+ A + AAA++ + LAR +
Sbjct: 1610 NGVVSGHAAPLRIAGEPPGGDVAVVGKLRSSGSTLAEQWGPLAAAQIRKRRQKLARSHQQ 1669
Query: 555 HLDTCEFTRDRVASMRARARD 617
H+ EF +D + R D
Sbjct: 1670 HMRE-EFLQDPLRVKREARED 1689
>UniRef50_A1DYE6 Cluster: Nuclear receptor-like protein; n=1;
Trichinella spiralis|Rep: Nuclear receptor-like protein
- Trichinella spiralis (Trichina worm)
Length = 358
Score = 33.5 bits (73), Expect = 4.4
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP--RLLARVVRAHLDTCEFTRD 584
VR+GRVPKR + R+ ++ +S + E E ++ V +AH C + D
Sbjct: 204 VRYGRVPKRSRDRMQEDVRVTSMTGESEVDNEVEKHQLALYDIILSVSQAHHSNCNYAED 263
Query: 585 RVASMRARARDCP 623
+V ++ R P
Sbjct: 264 KVRNLSHRPMHFP 276
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,169,357
Number of Sequences: 1657284
Number of extensions: 10019144
Number of successful extensions: 28408
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 27431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28395
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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