Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n18f
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2992|AAN11689.1|  906|Drosophila melanogaster CG8127-PD...   163   2e-40
X51549-1|CAA35924.1| 1394|Drosophila melanogaster protein ( Dros...   124   8e-29
X51548-1|CAA35923.1| 1237|Drosophila melanogaster protein ( Dros...   124   8e-29
AE014296-2991|AAN11688.1| 1355|Drosophila melanogaster CG8127-PA...   124   8e-29
AE014296-2990|AAN11687.1| 1199|Drosophila melanogaster CG8127-PC...   124   8e-29
AE014296-2989|AAF49282.3| 1412|Drosophila melanogaster CG8127-PB...   124   8e-29
X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein ( D.me...    50   4e-06
AY070531-1|AAL48002.1|  651|Drosophila melanogaster GM14138p pro...    29   7.1  
AE014298-3194|AAF50944.2|  651|Drosophila melanogaster CG17598-P...    29   7.1  

>AE014296-2992|AAN11689.1|  906|Drosophila melanogaster CG8127-PD,
           isoform D protein.
          Length = 906

 Score =  163 bits (395), Expect = 2e-40
 Identities = 74/99 (74%), Positives = 87/99 (87%)
 Frame = +3

Query: 345 MGEDLPILKGILNGVVKYHNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDA 524
           MGE+LPILKGIL G V YHNAPVRFGRVPKREKARILAAMQQS+ +R  ++A A ELDD 
Sbjct: 1   MGEELPILKGILKGNVNYHNAPVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQ 60

Query: 525 PRLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPT 641
           PRLLA V+RAHL+TCEFT+++V++MR RARDCP+YS PT
Sbjct: 61  PRLLAAVLRAHLETCEFTKEKVSAMRQRARDCPSYSMPT 99


>X51549-1|CAA35924.1| 1394|Drosophila melanogaster protein (
           Drosophila mRNA forecdysone-inducible gene E75B. ).
          Length = 1394

 Score =  124 bits (300), Expect = 8e-29
 Identities = 56/77 (72%), Positives = 68/77 (88%)
 Frame = +3

Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
           VRFGRVPKREKARILAAMQQS+ +R  ++A A ELDD PRLLA V+RAHL+TCEFT+++V
Sbjct: 473 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTKEKV 532

Query: 591 ASMRARARDCPTYSQPT 641
           ++MR RARDCP+YS PT
Sbjct: 533 SAMRQRARDCPSYSMPT 549


>X51548-1|CAA35923.1| 1237|Drosophila melanogaster protein (
           Drosophila mRNA forecdysone-inducible gene E75A. ).
          Length = 1237

 Score =  124 bits (300), Expect = 8e-29
 Identities = 56/77 (72%), Positives = 68/77 (88%)
 Frame = +3

Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
           VRFGRVPKREKARILAAMQQS+ +R  ++A A ELDD PRLLA V+RAHL+TCEFT+++V
Sbjct: 316 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTKEKV 375

Query: 591 ASMRARARDCPTYSQPT 641
           ++MR RARDCP+YS PT
Sbjct: 376 SAMRQRARDCPSYSMPT 392


>AE014296-2991|AAN11688.1| 1355|Drosophila melanogaster CG8127-PA,
           isoform A protein.
          Length = 1355

 Score =  124 bits (300), Expect = 8e-29
 Identities = 56/77 (72%), Positives = 68/77 (88%)
 Frame = +3

Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
           VRFGRVPKREKARILAAMQQS+ +R  ++A A ELDD PRLLA V+RAHL+TCEFT+++V
Sbjct: 472 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTKEKV 531

Query: 591 ASMRARARDCPTYSQPT 641
           ++MR RARDCP+YS PT
Sbjct: 532 SAMRQRARDCPSYSMPT 548


>AE014296-2990|AAN11687.1| 1199|Drosophila melanogaster CG8127-PC,
           isoform C protein.
          Length = 1199

 Score =  124 bits (300), Expect = 8e-29
 Identities = 56/77 (72%), Positives = 68/77 (88%)
 Frame = +3

Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
           VRFGRVPKREKARILAAMQQS+ +R  ++A A ELDD PRLLA V+RAHL+TCEFT+++V
Sbjct: 316 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTKEKV 375

Query: 591 ASMRARARDCPTYSQPT 641
           ++MR RARDCP+YS PT
Sbjct: 376 SAMRQRARDCPSYSMPT 392


>AE014296-2989|AAF49282.3| 1412|Drosophila melanogaster CG8127-PB,
           isoform B protein.
          Length = 1412

 Score =  124 bits (300), Expect = 8e-29
 Identities = 56/77 (72%), Positives = 68/77 (88%)
 Frame = +3

Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
           VRFGRVPKREKARILAAMQQS+ +R  ++A A ELDD PRLLA V+RAHL+TCEFT+++V
Sbjct: 529 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTKEKV 588

Query: 591 ASMRARARDCPTYSQPT 641
           ++MR RARDCP+YS PT
Sbjct: 589 SAMRQRARDCPSYSMPT 605


>X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein (
           D.melanogaster 75B mRNAencoding hypothetical 75B
           protein. ).
          Length = 1443

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 26/64 (40%), Positives = 36/64 (56%)
 Frame = +3

Query: 411 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARVVRAHLDTCEFTRDRV 590
           VRFGRVPKREKARI     ++    A    +      +         AHL+TCEFT+++V
Sbjct: 525 VRFGRVPKREKARIWRPCNRAPRIAASSDPSPPSWMTSHASSPPCCCAHLETCEFTKEKV 584

Query: 591 ASMR 602
           ++MR
Sbjct: 585 SAMR 588


>AY070531-1|AAL48002.1|  651|Drosophila melanogaster GM14138p
           protein.
          Length = 651

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 19/96 (19%), Positives = 41/96 (42%)
 Frame = +3

Query: 342 NMGEDLPILKGILNGVVKYHNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 521
           ++ E+  + + +   + KY     R+  V +   AR    +  S   R  +  AAA +DD
Sbjct: 439 DVSENDAVSRTVFQTLSKYSTEKHRYTMVAQELVARARGKINDSGHWRLADSKAAATVDD 498

Query: 522 APRLLARVVRAHLDTCEFTRDRVASMRARARDCPTY 629
              ++  V + + +  E+T++    +  R R    +
Sbjct: 499 ISVIVIPVCQYYKEHVEWTQNYKRDLEHRRRQAQAH 534


>AE014298-3194|AAF50944.2|  651|Drosophila melanogaster CG17598-PA
           protein.
          Length = 651

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 19/96 (19%), Positives = 41/96 (42%)
 Frame = +3

Query: 342 NMGEDLPILKGILNGVVKYHNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 521
           ++ E+  + + +   + KY     R+  V +   AR    +  S   R  +  AAA +DD
Sbjct: 439 DVSENDAVSRTVFQTLSKYSTEKHRYTMVAQELVARARGKINDSGHWRLADSKAAATVDD 498

Query: 522 APRLLARVVRAHLDTCEFTRDRVASMRARARDCPTY 629
              ++  V + + +  E+T++    +  R R    +
Sbjct: 499 ISVIVIPVCQYYKEHVEWTQNYKRDLEHRRRQAQAH 534


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,745,266
Number of Sequences: 53049
Number of extensions: 482839
Number of successful extensions: 1681
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)