Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n10f
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    27   0.11 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   3.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.5  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -1

Query: 232 SESTGQATAASMSFG-VSANPKS*STRRLGQW 140
           S STGQ   A+ SFG V++ P S S+  LGQ+
Sbjct: 45  SISTGQRLPANFSFGQVNSPPSSTSSGSLGQF 76


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 64  PYLFKYNQICLFYHSCWVTGP 126
           PY ++Y Q    YH     GP
Sbjct: 40  PYYYQYLQNAALYHKLQFRGP 60


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 45  NFSLRFTIPIQIQPNMSLLPFVLGDW 122
           N SL   IPI +  +   + F+ G W
Sbjct: 282 NMSLLTVIPIHVWTSKEKISFLRGFW 307


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 93  SLLPFVLGDWPRVRHNHWPSRLVDQDFGLALT 188
           S+LP    + P+   NH  + L D D  L +T
Sbjct: 27  SILPETALEAPKSPENHPETELSDSDCDLDVT 58


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 281 EVTRCSRELSPWSEVVFGEHWTGDGSQHVV 192
           E+ R    L+ +  +V GE WT     H+V
Sbjct: 178 EIWRRFTILNNYLTIVLGETWTSLSVYHLV 207


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 281 EVTRCSRELSPWSEVVFGEHWTGDGSQHVV 192
           E+ R    L+ +  +V GE WT     H+V
Sbjct: 174 EIWRRFTILNNYLTIVLGETWTSLSVYHLV 203


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 168 LDQQDDWASGCDER 127
           LDQQ+ W   C  R
Sbjct: 580 LDQQNQWCKPCRPR 593


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 168 LDQQDDWASGCDER 127
           LDQQ+ W   C  R
Sbjct: 472 LDQQNQWCKPCRPR 485


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,406
Number of Sequences: 336
Number of extensions: 2955
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)