Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n10f
         (553 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    99   8e-23
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   5.0  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   8.8  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 99.1 bits (236), Expect = 8e-23
 Identities = 48/88 (54%), Positives = 57/88 (64%)
 Frame = +3

Query: 276 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 455
           D GS++   KDKFQ+NLDVQ FSPEEISVK  D  ++V            Y+SR FVRRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 456 ALPEGAAPETVESRLSSDGVLTITAPRK 539
            LP+G     + S LSSDG+LTIT PRK
Sbjct: 63  MLPKGHNEADIVSSLSSDGILTITCPRK 90


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 217 QATAASMSFGVSANPKS*STRRLGQWL*RTRG 122
           ++ A   S G  A PK+   + +G W   TRG
Sbjct: 139 RSMAGFRSLGSGAPPKAQGGKHVGNWEQHTRG 170


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 402  RACLPPRCTHRQSSPKSLPARSAARP 325
            R+   P+ +H Q+ P+ +P  + ARP
Sbjct: 1093 RSTPTPQRSHTQAGPRVVPDPAHARP 1118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,617
Number of Sequences: 2352
Number of extensions: 11681
Number of successful extensions: 75
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)