Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n05f
         (438 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   3.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   3.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   5.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   5.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   9.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   9.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    20   9.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    20   9.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 108  KQATSSS*STSWRPGA 155
            +  TS S +TSW PG+
Sbjct: 1347 QSTTSVSTTTSWNPGS 1362


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 106 RQPCLQVVGIFDVNGHLGF 50
           R P    +G+F +NG   F
Sbjct: 627 RAPTFTALGLFPINGSFAF 645


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 64  HSHQRFRRPEDKAGGSRRQARRDR 135
           H  +   R   ++GG RRQ R  R
Sbjct: 572 HYKEHIMRSITESGGRRRQTREKR 595


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 325 FVQFLAILNEDERRHRVNVVLAGDVLALINV 233
           F+Q LAI+ E E   R  V L  D     N+
Sbjct: 328 FIQLLAIVPEKEESSRQAVNLICDKFERSNI 358


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 325 FVQFLAILNEDERRHRVNVVLAGDVLALINV 233
           F+Q LAI+ E E   R  V L  D     N+
Sbjct: 328 FIQLLAIVPEKEESSRQAVNLICDKFERSNI 358


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 162 HGPHQVAMKS 133
           HGPH++A +S
Sbjct: 603 HGPHRLAARS 612


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 162 HGPHQVAMKS 133
           HGPH++A +S
Sbjct: 495 HGPHRLAARS 504


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 238 NVHLHNDDGI 209
           N HLH DD I
Sbjct: 8   NTHLHPDDAI 17


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 238 NVHLHNDDGI 209
           N HLH DD I
Sbjct: 8   NTHLHPDDAI 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,974
Number of Sequences: 336
Number of extensions: 1626
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)