Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10n05f
(438 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 63 8e-11
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 63 8e-11
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 46 1e-05
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 44 6e-05
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 43 1e-04
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 42 3e-04
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 7e-04
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 40 9e-04
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 37 0.006
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 36 0.011
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3) 34 0.045
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 31 0.55
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 30 0.96
SB_50329| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 2.2
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 2.9
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 28 3.9
SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1) 27 5.1
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 27 5.1
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 27 6.8
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_10939| Best HMM Match : GLYCAM-1 (HMM E-Value=3.4) 27 8.9
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 27 8.9
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 63.3 bits (147), Expect = 8e-11
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +2
Query: 53 PKMSIHIKDSDDLKT-RLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXX 229
P+ ++ + + D T L AG KLVV DF A+WCGPCK I P + +E
Sbjct: 5 PRGNVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGL-SEKYKQAVFLK 63
Query: 230 XXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 340
A++ + +MPTF F KN K+DE GA+
Sbjct: 64 IDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGAD 100
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 63.3 bits (147), Expect = 8e-11
Identities = 33/92 (35%), Positives = 43/92 (46%)
Frame = +2
Query: 65 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXX 244
I ++D + AG +LVVIDF ATWCGPCK I P ++ +
Sbjct: 11 IVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKF-MDVVFLKVDVDQ 69
Query: 245 XXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 340
A I +MPTF F N K+DE GA+
Sbjct: 70 CQLTAESCGIRAMPTFHFYHNKAKIDELRGAD 101
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 47.6 bits (108), Expect = 4e-06
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 149 WCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEF 328
WC PCK++ P LD I AE A + +N++PT + +K GK +++F
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVINKF 61
Query: 329 SG 334
G
Sbjct: 62 EG 63
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 46.4 bits (105), Expect = 1e-05
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAE 202
+++ IDF ATWCGPC+MIGP +E+A E
Sbjct: 11 NEVAAIDFTATWCGPCRMIGPKFEEMAKE 39
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 44.8 bits (101), Expect = 3e-05
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 71 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAE 202
I++ + + + DKLVVIDF A WCGPC+ I P ++A E
Sbjct: 15 IEERAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALE 58
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Frame = +2
Query: 83 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXX--------XXXX 238
DD A K V++DF A WC CK + P ++A E+
Sbjct: 140 DDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANN 199
Query: 239 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 340
+YN+ +PT +GK ++EF G N
Sbjct: 200 MATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNN 233
Score = 31.1 bits (67), Expect = 0.42
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAEM 205
++ V++DF A WC C+ + P D A ++
Sbjct: 68 NEYVLVDFYAPWCSDCQRLSPLFDTAALQL 97
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 143 ATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 322
A WC PCK++ P LD I AE A + +N++PT + +K GK ++
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVME 105
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +2
Query: 101 LAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 280
+A DK V ++F A WCG CK + P D++ + ++S
Sbjct: 397 VARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHS 456
Query: 281 MPTF-VFVKNGKKLDEFSGANVD 346
PT F K G+ +D G +D
Sbjct: 457 FPTIKYFPKEGEAVDYNGGRTLD 479
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +2
Query: 104 AEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXX---XXXXXXXXXXXXASEYNI 274
A A +K V+++F A WCG CK + P + A ++ ++ +
Sbjct: 37 AVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQV 96
Query: 275 NSMPTFVFVKNGKKLDEFSG 334
PT F K+GK E++G
Sbjct: 97 QGYPTIKFFKDGKP-SEYAG 115
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Frame = +2
Query: 59 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXX----XXX 226
+S + D D + AG +++++F A WCG CK + P + A +
Sbjct: 536 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 595
Query: 227 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSG 334
S+Y ++ PT +NG+ ++ G
Sbjct: 596 VDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDG 631
Score = 31.9 bits (69), Expect = 0.24
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 119 KLVVIDFMATWCGPCKMIGP*LDEIAAEM 205
K V+I+F A WCG CK + P +E+ ++
Sbjct: 881 KDVLIEFYAPWCGHCKSLEPKYNELGEKL 909
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +2
Query: 110 AGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPT 289
A + V+DF A WCGPC P +++A + SE NI+S PT
Sbjct: 449 ASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPT 508
Score = 30.3 bits (65), Expect = 0.73
Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +2
Query: 131 IDFMATWCGPCKMIGP*LDEIAAE-MXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKN 307
+DF A WC PC + P + A + +YNI S PT + N
Sbjct: 307 VDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTILYNN 366
Query: 308 GK 313
+
Sbjct: 367 SQ 368
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 39.9 bits (89), Expect = 9e-04
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +2
Query: 122 LVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTF-VF 298
L +++F A WCG C+ + P + A E+ AS Y + PT VF
Sbjct: 99 LWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVF 158
Query: 299 ---VKNGKKLDEFSG 334
+KN ++++ G
Sbjct: 159 AAGIKNSHSVEDYQG 173
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXX---XXXXXXXXXXXXXXASEYNINSMP 286
+ L++++F A WCG CK + P ++ A E+ A +Y + P
Sbjct: 193 ESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYP 252
Query: 287 TFVFVKNGKKLDEFSG 334
T + G K E+ G
Sbjct: 253 TLKVFRKG-KATEYKG 267
Score = 32.3 bits (70), Expect = 0.18
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +2
Query: 62 SIHIKDSDDLKTRLAEAGDK------LVVIDFMATWCGPCKMIGP*LDEIAAEM 205
S +K+ DD+ ++ D+ +++++F A WCG CK + P + A +M
Sbjct: 54 SDEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKM 107
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 37.1 bits (82), Expect = 0.006
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +2
Query: 113 GDKLVVIDFMATWCGPCKMIGP*LDEI--AAEMXXXXXXXXXXXXXXXXXASEYNINSMP 286
G+K +++F A WCG CK + P +++ A S +++ P
Sbjct: 38 GEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFP 97
Query: 287 TF-VFVKNGKKLDEFSG 334
T F K +E++G
Sbjct: 98 TIKYFPKGSTTPEEYNG 114
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 36.3 bits (80), Expect = 0.011
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 59 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAE 202
+S + D D + AG +++++F A WCG CK + P E AAE
Sbjct: 11 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY-ETAAE 57
>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
Length = 222
Score = 34.3 bits (75), Expect = 0.045
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 101 LAEAGDKLVVIDFMATWCGPCKMIGP 178
L E+ K+ +IDF A+WC PC++ P
Sbjct: 172 LKESMGKVTIIDFWASWCQPCRVENP 197
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 30.7 bits (66), Expect = 0.55
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +2
Query: 92 KTRLAEAGD----KLVVIDFMATWCGPCKMIGP*LDEIAAEM 205
K L +AG+ K++ + F A WC PC+ P L + E+
Sbjct: 13 KGELVDAGEAVKGKVIAVYFSAHWCPPCRQFTPILKDFYEEL 54
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 29.9 bits (64), Expect = 0.96
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAE 202
+K+V I F A+WC PC+ P L + E
Sbjct: 154 NKVVAIYFSASWCPPCQKFTPLLKDFYEE 182
>SB_50329| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 334
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 177 GPIILHGPHQVAMKSITTSLSPA-SASLVFRSSESLM*MDILGFYTNARIS 28
GP+ L PH I T+L+ A ++F L+ +++L F+ A++S
Sbjct: 219 GPVCLRKPHSAMKSEIKTALTLAVVVGVLFLFWTPLVFLNLLSFFRGAQVS 269
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +1
Query: 76 RFRRPEDKAGGSRRQARRDRLHGDLVRTVQDDRALTG 186
R RRP GGS RQ R R G +DR L G
Sbjct: 454 RDRRPHPTRGGSSRQQERFRREGRRRSLEDNDRRLEG 490
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 127 DELVACFRQPCLQVVGIFDVNGHLGFLYKCT 35
+EL +C R PC D+N L Y C+
Sbjct: 167 EELNSCLRSPCQNQATCLDINAGLRDAYNCS 197
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Frame = +2
Query: 122 LVVIDFMATWCGPCKMIGP*LD----EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPT 289
++++DF A WC C+ + P L+ +AA+ + I P+
Sbjct: 39 IMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGYPS 98
Query: 290 FVFVKNGKKLDEFSGANVD 346
K GK ++ G D
Sbjct: 99 VKLFKFGKYAGDYIGQRTD 117
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEMXX--XXXXXXXXXXXXXXXASEYNINSMPTFVF 298
V++ F A WCG CK P ++ A + +N PT +
Sbjct: 167 VLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRY 226
Query: 299 VKNGKKLDEFSGANV 343
GK + E+ G V
Sbjct: 227 YLYGKFVVEYDGDRV 241
>SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)
Length = 432
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 49 KTQDVHSHQRFRRPEDKAGGSRRQARRDR 135
+ ++ +R RR ED+ G RR+ RRD+
Sbjct: 166 REKEREKERRRRRHEDEGSGDRRRERRDK 194
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 53 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP 178
P +H++D DD + + V++ F A WCG CK + P
Sbjct: 81 PSEVVHLRDDMFDDFVAK-----NPSVLVMFYAPWCGHCKAMKP 119
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 119 KLVVIDFMATWCGPCKMIGP 178
K V++ F A WCG CK P
Sbjct: 213 KHVLVMFYAPWCGHCKKAKP 232
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +2
Query: 110 AGD---KLVVIDFMATWCGPCKMIGP 178
AGD K+V I F A WC PC+ P
Sbjct: 168 AGDLKGKIVGIYFSAHWCPPCRAFTP 193
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.1 bits (57), Expect = 6.8
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +2
Query: 119 KLVVIDFMATWCGPCKMIGP*LDEIAAEM 205
+++++DF A WC C + P ++ A ++
Sbjct: 40 EVMLVDFYAPWCSDCDNLRPKYEKAARDL 68
>SB_10939| Best HMM Match : GLYCAM-1 (HMM E-Value=3.4)
Length = 210
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = +1
Query: 1 DCHRVFRRFGNSCICI---KTQDVH-SHQRFRRPEDKAGGSRRQARRDRLHGDLVRTVQD 168
D V F S CI K QD S +RP GSRR +R + G++ V
Sbjct: 36 DAEAVQNEFDESKDCIDLDKPQDPDFSSSSCKRPRLSTDGSRRSSRHRKQRGEISLVVHS 95
Query: 169 DRAL 180
++L
Sbjct: 96 TQSL 99
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 345 STLAPENSSSFLPFLTKTNVGIEL 274
S + ENSSSF+P L K NV +++
Sbjct: 972 SNVEGENSSSFVPPLFKANVTLQI 995
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,328,042
Number of Sequences: 59808
Number of extensions: 214191
Number of successful extensions: 714
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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