Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10n05f
(438 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 71 3e-13
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 67 4e-12
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 67 6e-12
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 66 1e-11
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 65 2e-11
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 64 5e-11
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 63 7e-11
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 63 7e-11
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 62 1e-10
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 60 5e-10
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 59 1e-09
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 59 1e-09
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 58 3e-09
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 57 5e-09
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 57 5e-09
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 54 6e-08
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 53 1e-07
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 50 7e-07
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 47 5e-06
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 46 8e-06
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 46 1e-05
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 45 3e-05
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 44 5e-05
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 43 1e-04
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 42 2e-04
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 42 2e-04
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 42 2e-04
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 41 3e-04
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 41 3e-04
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 40 6e-04
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 40 7e-04
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 40 0.001
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 40 0.001
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 38 0.002
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 38 0.003
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 38 0.003
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 37 0.007
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 37 0.007
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 36 0.016
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 36 0.016
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 36 0.016
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 35 0.021
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 35 0.028
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 34 0.036
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 34 0.036
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 34 0.036
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 34 0.048
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 33 0.064
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 33 0.11
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 33 0.11
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 31 0.26
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 31 0.26
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 31 0.26
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 31 0.26
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 31 0.45
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 29 1.4
At1g78740.1 68414.m09177 hypothetical protein 27 4.2
At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase fa... 27 5.5
At4g12050.1 68417.m01917 DNA-binding protein-related contains Pf... 27 7.3
At5g48100.1 68418.m05942 laccase family protein / diphenol oxida... 26 9.7
At5g18830.2 68418.m02238 squamosa promoter-binding protein-like ... 26 9.7
At5g18830.1 68418.m02237 squamosa promoter-binding protein-like ... 26 9.7
At4g18200.1 68417.m02705 purine permease family protein similar ... 26 9.7
At4g05370.1 68417.m00819 hypothetical protein 26 9.7
At4g02330.1 68417.m00317 pectinesterase family protein contains ... 26 9.7
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 70.9 bits (166), Expect = 3e-13
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +2
Query: 68 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXX 247
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A +
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
Query: 248 XXXASEYNINSMPTFVFVKNGKKLDEFSGAN 340
A E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 72 QSVAKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 67.3 bits (157), Expect = 4e-12
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +2
Query: 101 LAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 280
L + DK V++DF ATWCGPC+++ P L+E++ + A++Y I +
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEA 130
Query: 281 MPTFVFVKNGKKLDEFSGA 337
+PTF+ K+GK D F GA
Sbjct: 131 LPTFILFKDGKLWDRFEGA 149
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 66.9 bits (156), Expect = 6e-12
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +2
Query: 59 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXX 238
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A +
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDID 332
Query: 239 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 340
AS +NI+S+PTF F+++GK++D+ GA+
Sbjct: 333 KANDVAAS-WNISSVPTFCFIRDGKEVDKVVGAD 365
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 65.7 bits (153), Expect = 1e-11
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +2
Query: 29 EIRAFV*KPKMSIHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGP*LDEIAAE 202
EI F + IK+ + K+RL D KL+VI+F A WCGPCK + P L+E+AA+
Sbjct: 28 EIYPFKVNSPCIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAK 87
Query: 203 MXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 346
E+N++++P VF+K G+++D G VD
Sbjct: 88 YTDVEFVKIDVDVLMSVW-MEFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 65.3 bits (152), Expect = 2e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 295
+KL+V+DF A+WCGPC+MI P + + A+ A E+N+ +MPTFV
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAM-ADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFV 105
Query: 296 FVKNGKKLDEFSGANVD 346
VK GK+++ GA D
Sbjct: 106 LVKRGKEIERIIGAKKD 122
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 63.7 bits (148), Expect = 5e-11
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = +2
Query: 65 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXX 244
I K+S D K A+ K+VV +F ATWCGPCK++ P E+ +E
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIEL-SEKHSSLMFLLVDVDE 86
Query: 245 XXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 340
+S ++I + PTF F+KNG+++ + GAN
Sbjct: 87 LSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 63.3 bits (147), Expect = 7e-11
Identities = 32/96 (33%), Positives = 52/96 (54%)
Frame = +2
Query: 59 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXX 238
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDT 67
Query: 239 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 346
AS++ I +MPTF+F+K GK LD+ GA D
Sbjct: 68 DELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKD 103
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 63.3 bits (147), Expect = 7e-11
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 295
DK V++D+ ATWCGPC+ + P L+E++ + A++Y I ++PTF+
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKYKIEALPTFI 140
Query: 296 FVKNGKKLDEFSGA 337
K+G+ D F GA
Sbjct: 141 LFKDGEPCDRFEGA 154
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 62.5 bits (145), Expect = 1e-10
Identities = 38/110 (34%), Positives = 56/110 (50%)
Frame = +2
Query: 8 IACSAGLEIRAFV*KPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LD 187
IAC A A V P +S DS+ +T++ E+ D V+++F A WCGPC+MI P +D
Sbjct: 74 IACEAQDTTAAAVEVPNLS----DSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVD 127
Query: 188 EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGA 337
++A + A+ Y I S+PT + K G+K D GA
Sbjct: 128 QLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 60.5 bits (140), Expect = 5e-10
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +2
Query: 92 KTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYN 271
K + A KL+VIDF A+WC PC+ I P E+A + A E+
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKF-TNVVFFKIDVDELQAVAQEFK 77
Query: 272 INSMPTFVFVKNGKKLDEFSGANVD 346
+ +MPTFVF+K G +D GA D
Sbjct: 78 VEAMPTFVFMKEGNIIDRVVGAAKD 102
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 59.3 bits (137), Expect = 1e-09
Identities = 30/80 (37%), Positives = 42/80 (52%)
Frame = +2
Query: 107 EAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 286
+ +KL+VIDF A WCGPCK + P + EIA++ A Y ++P
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASK-YSEAVFARVDVDRLMDVAGTYRAITLP 98
Query: 287 TFVFVKNGKKLDEFSGANVD 346
FVFVK G+++D GA D
Sbjct: 99 AFVFVKRGEEIDRVVGAKPD 118
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 58.8 bits (136), Expect = 1e-09
Identities = 29/90 (32%), Positives = 42/90 (46%)
Frame = +2
Query: 77 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXX 256
D D + AGDK+VV+D WCGPCK+I P E++ +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPL 143
Query: 257 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 346
A E I +PTF +K+ K + E +GA +
Sbjct: 144 AKELGIRVVPTFKILKDNKVVKEVTGAKYE 173
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 57.6 bits (133), Expect = 3e-09
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +2
Query: 80 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXA 259
+D L D+ V +DF A WCGPCKMI P ++E+A +
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATP 139
Query: 260 SEYNINSMPTFVFVKNGKKLDEFSGA 337
+Y + S+PT + NG+K D GA
Sbjct: 140 GQYGVRSIPTIMIFVNGEKKDTIIGA 165
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 57.2 bits (132), Expect = 5e-09
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +2
Query: 92 KTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYN 271
K + A KL+VIDF ATWC PC+ I P ++ A+ A E+
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADL-AKKHLDVVFFKVDVDELNTVAEEFK 77
Query: 272 INSMPTFVFVKNGKKLDEFSGA 337
+ +MPTF+F+K G+ + GA
Sbjct: 78 VQAMPTFIFMKEGEIKETVVGA 99
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 57.2 bits (132), Expect = 5e-09
Identities = 29/90 (32%), Positives = 41/90 (45%)
Frame = +2
Query: 77 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXX 256
D D + AG+KLVV+D WCGPCK+I P ++ +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPL 133
Query: 257 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 346
A E I +PTF +K+ K + E +GA D
Sbjct: 134 AKELGIRVVPTFKILKDNKVVKEVTGAKYD 163
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 53.6 bits (123), Expect = 6e-08
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 304
VV+DF A WCGPCKMI P ++++A +Y + S+PT +
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFV 160
Query: 305 NGKKLDEFSGA 337
G+K D GA
Sbjct: 161 GGEKKDTIIGA 171
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 304
V+++F +WCGPC+M+ +DEIA + A EY I ++P + K
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFK 146
Query: 305 NGKKLDEFSG 334
NG+K + G
Sbjct: 147 NGEKRESIMG 156
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 50.0 bits (114), Expect = 7e-07
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 304
V+++F+ATWCGPCK+I P ++ ++ E +E+ + +P F+ K
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFK 149
Query: 305 NGKKL 319
+GK++
Sbjct: 150 DGKEV 154
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 47.2 bits (107), Expect = 5e-06
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +2
Query: 104 AEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 283
A + K++V++F A+WC P K I P E+A+ + E+N+++
Sbjct: 58 ANSHGKILVVNFKASWCLPSKTILPIYQELAS-TYTSMIFVTIDVEELAEFSHEWNVDAT 116
Query: 284 PTFVFVKNGKKLDEFSGAN 340
PT VF+K+G+++D+ G +
Sbjct: 117 PTVVFLKDGRQMDKLVGGD 135
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 46.4 bits (105), Expect = 8e-06
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +2
Query: 53 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAE 202
P M I I ++ L +AGD+LV++DF TWCG C+ + P L + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 46.0 bits (104), Expect = 1e-05
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +2
Query: 71 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXX 244
+K ++ +++A D + V F A WCGPC+ I P + E++ +
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPDVTTYKVDIDEG 148
Query: 245 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 343
S+ NI ++PT F K G K E GA+V
Sbjct: 149 GISNTISKLNITAVPTLHFFKGGSKKGEVVGADV 182
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 44.8 bits (101), Expect = 3e-05
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +2
Query: 50 KPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXX 229
KP M + DL L AGDKLVV+DF + CG CK + P + +I AE
Sbjct: 92 KPNMK-SVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKI-AEKNPEVEFLQ 149
Query: 230 XXXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFSGAN 340
NI+ +P F F + ++ FS N
Sbjct: 150 VNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTN 187
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +2
Query: 71 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXX 244
+K + + L++A D + V F A WCGPC++I P + E++ +
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPDVTTYKVDIDEG 113
Query: 245 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 343
A + N++++PT F K G K E G +V
Sbjct: 114 GLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDV 147
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 143 ATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 322
A WC PCK I P ++A+ ++E+N+ + PT VF+K+G+++D
Sbjct: 17 APWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEF-SNEWNVEATPTVVFLKDGRQMD 75
Query: 323 EFSGA 337
+ GA
Sbjct: 76 KLVGA 80
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 53 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXX 232
P M + I +++ + L+ AG++LV+++F TWC C+ + P L + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 233 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 331
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 53 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXX 232
P M + I +++ + L+ AG++LV+++F TWC C+ + P L + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 233 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 331
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 304
+V F A WC P + +E+A AS+ + +MPTF+F+K
Sbjct: 27 IVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVDVDEVKEV-ASQLEVKAMPTFLFLK 85
Query: 305 NGKKLDEFSGANVD 346
+G +D+ GAN D
Sbjct: 86 DGNAMDKLVGANPD 99
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 113 GDKLV--VIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 286
GD+ V ++DF ATWCGPC ++ L+ +A E A + + +P
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYEFARDMQVRGLP 150
Query: 287 TFVFV 301
T F+
Sbjct: 151 TLFFI 155
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 41.1 bits (92), Expect = 3e-04
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +2
Query: 71 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXX 250
I + +L L AGDKLVV+DF + CG CK + P + + AEM
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDVQFLQVNYEEHK 160
Query: 251 XXASEYNINSMPTFVFVKNGK-KLDEFSGAN 340
++ +P F F + + ++ FS N
Sbjct: 161 SMCYSLGVHVLPFFRFYRGSQGRVCSFSCTN 191
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 304
V++ F A WCGPC+ + P L+++ +E ++I+ +PT + K
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFK 289
Query: 305 NGKKLDEFSGAN 340
G+++ + +GA+
Sbjct: 290 GGEQMAKVTGAD 301
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 39.9 bits (89), Expect = 7e-04
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 65 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXX 244
+ I+ ++ L L AGD+LVV+DF + CG CK + P + ++ AE
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQL-AETNPNVMFLKVNQEE 146
Query: 245 XXXXASEYNINSMPTFVFVKNGK-KLDEFS 331
N++ +P F F + + K+ FS
Sbjct: 147 LRTMCHGLNVHVLPFFKFYRGAEGKVCSFS 176
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 122 LVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 301
+V+++F A WCG CK + P +++A + A +Y I PT
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAIDADAHQSAAQDYGIKGFPTIKVF 109
Query: 302 KNGKKLDEFSGA 337
GK ++ GA
Sbjct: 110 VPGKAPIDYQGA 121
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +2
Query: 50 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXX 223
+P S+ + S DDL ++L +++F A WCG CK + P A +
Sbjct: 160 EPSASVELNASNFDDLVIE----SNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKVKL 215
Query: 224 XXXXXXXXXXXASEYNINSMPTFV 295
S + + PT +
Sbjct: 216 GHVNCDVEQSIMSRFKVQGFPTIL 239
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 289
+V++F A WCG C+ + P ++ A+E+ A+EY I PT
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPT 108
Query: 290 FVFVKN-GKKLDEFSG 334
++N GK + +++G
Sbjct: 109 LKILRNGGKSVQDYNG 124
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Frame = +2
Query: 50 KPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGP*LDEIA 196
K I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 361 KKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +2
Query: 122 LVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 301
+V+++F A WCG C+ + P +++A+ + + +Y + PT
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFPTIKVF 107
Query: 302 KNGKKLDEFSGA 337
GK ++ GA
Sbjct: 108 VPGKPPIDYQGA 119
Score = 33.9 bits (74), Expect = 0.048
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Frame = +2
Query: 50 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXX 223
+P S+ + S D+L T E L +++F A WCG CK + P + A +
Sbjct: 161 EPSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKL 216
Query: 224 XXXXXXXXXXXASEYNINSMPTFVFVKNGK 313
S + + PT + + K
Sbjct: 217 GHVNCDAEQSIKSRFKVQGFPTILVFGSDK 246
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 289
+V++F A WCG CK + P ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 290 F-VFVKNGKKLDEFSG 334
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 80 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIA 196
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 289
+V++F A WCG CK + P ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 290 F-VFVKNGKKLDEFSG 334
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 80 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIA 196
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 304
VV+ F A+WC K + +A + + Y++ ++P FVF K
Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPRAHFFRVEAEEHPEI-SEAYSVAAVPYFVFFK 82
Query: 305 NGKKLDEFSGAN 340
+GK +D GA+
Sbjct: 83 DGKTVDTLEGAD 94
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LD---EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 295
+ +DF A WCG CK + P LD I A++ A + I++ PT +
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNADKYSRLARKIEIDAFPTLM 111
Query: 296 FVKNGKKLDEFSGANVD 346
+G ++ + D
Sbjct: 112 LYNHGVPMEYYGPRKAD 128
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 35.5 bits (78), Expect = 0.016
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 292
++ V+++F A WCG C+ + P A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 293 VFVKNGK 313
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +2
Query: 119 KLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 298
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 299 VKNGKKLDE 325
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 35.5 bits (78), Expect = 0.016
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 292
++ V+++F A WCG C+ + P A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 293 VFVKNGK 313
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +2
Query: 119 KLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 298
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 299 VKNGKKLDE 325
G K E
Sbjct: 520 FPAGNKTSE 528
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 35.5 bits (78), Expect = 0.016
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +2
Query: 83 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXAS 262
DD+K+ + A VI++ A+WCG C I P +++ +
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFSKLKFVYADIDECPE---T 88
Query: 263 EYNINSMPTFVFVKNGKKLDEFSGA 337
+I PTF F ++G+K+DE GA
Sbjct: 89 TRHIRYTPTFQFYRDGEKVDEMFGA 113
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 35.1 bits (77), Expect = 0.021
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +2
Query: 59 MSIHIKD--SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXX 232
MS +KD S + L +G LV + F A+WC K + +A +
Sbjct: 1 MSGTVKDIVSKEELDNLRHSGAPLV-LHFWASWCDASKQMDQVFSHLATDFPRAHFFRVE 59
Query: 233 XXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 340
+ Y++ +P FVF K+GK +D GA+
Sbjct: 60 AEEHPEI-SEAYSVALVPYFVFFKDGKTVDTLEGAD 94
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 34.7 bits (76), Expect = 0.028
Identities = 16/73 (21%), Positives = 27/73 (36%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 295
+ +++F A WCG C+ + P A E+ A +Y I PT
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATELKGLAALAKIDATEEGDLAQKYEIQGFPTVF 175
Query: 296 FVKNGKKLDEFSG 334
+G+ + G
Sbjct: 176 LFVDGEMRKTYEG 188
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/76 (19%), Positives = 27/76 (35%)
Frame = +2
Query: 119 KLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 298
K V+++ A WCG C+ P +++ + + PT +F
Sbjct: 456 KDVLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDSLVVAKMDGTSNEHPRAKADGFPTILF 515
Query: 299 VKNGKKLDEFSGANVD 346
G K + +VD
Sbjct: 516 FPGGNKSFDPIAVDVD 531
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 34.3 bits (75), Expect = 0.036
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 301
VVI +MA WC C + P L+++AAE S + MPT
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLW 160
Query: 302 KNGKKLDEFSGAN 340
++G+K E G +
Sbjct: 161 RDGQKQAEVIGGH 173
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 34.3 bits (75), Expect = 0.036
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 289
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 290 F-VFVKNGKKLDEFSG 334
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
Score = 32.7 bits (71), Expect = 0.11
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAA 199
DK +++F A WCG CK + P +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 34.3 bits (75), Expect = 0.036
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 289
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 290 F-VFVKNGKKLDEFSG 334
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
Score = 32.7 bits (71), Expect = 0.11
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 116 DKLVVIDFMATWCGPCKMIGP*LDEIAA 199
DK +++F A WCG CK + P +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 33.9 bits (74), Expect = 0.048
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 125 VVIDFMATWCGPCKMIGP*LDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 301
++I++MA+WC C + P L+++AAE NI+ MPT
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLW 180
Query: 302 KNGKKLDEFSGAN 340
K + +E G +
Sbjct: 181 KEDEMKEEVIGGH 193
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 33.5 bits (73), Expect = 0.064
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +2
Query: 113 GDKLVVIDFMATWCGPCKMIGP---*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 283
G KL+V+D CGPC + P L +E + N+ +
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETVVFARMNGDENDSCMEFLKDMNVIEV 265
Query: 284 PTFVFVKNGKKLDEFSGA 337
PTF+F+++G+ + G+
Sbjct: 266 PTFLFIRDGEIRGRYVGS 283
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 32.7 bits (71), Expect = 0.11
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +2
Query: 74 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGP*LDEIA-------AEMXXXXXXX 226
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 163
Query: 227 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 331
A I ++P F F KNG L+ F+
Sbjct: 164 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 198
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 32.7 bits (71), Expect = 0.11
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +2
Query: 74 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGP*LDEIA-------AEMXXXXXXX 226
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 150
Query: 227 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 331
A I ++P F F KNG L+ F+
Sbjct: 151 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 185
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 31.5 bits (68), Expect = 0.26
Identities = 17/82 (20%), Positives = 32/82 (39%)
Frame = +2
Query: 98 RLAEAGDKLVVIDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXASEYNIN 277
+L +++++ + + CGPC+ + P L+++ E A I
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAAGIM 495
Query: 278 SMPTFVFVKNGKKLDEFSGANV 343
P F KN + L SG +
Sbjct: 496 GTPCVQFFKNKEMLRTISGVKM 517
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 31.5 bits (68), Expect = 0.26
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +2
Query: 131 IDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 304
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 305 NGKKLDEFSG 334
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 31.5 bits (68), Expect = 0.26
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +2
Query: 131 IDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 304
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 305 NGKKLDEFSG 334
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 31.5 bits (68), Expect = 0.26
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +2
Query: 131 IDFMATWCGPCKMIGP*LDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 304
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 305 NGKKLDEFSG 334
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 30.7 bits (66), Expect = 0.45
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 119 KLVVIDFMATWCGPCKMIGP*LDEIAAEM 205
K + + F A WCGPC+ P L E+ E+
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
Score = 30.7 bits (66), Expect = 0.45
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 68 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGP*LDEI 193
++ D K +++ K +++ F A WC PC+ P L E+
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEV 388
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 74 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMI 172
K D+L + L ++ + LVV+DF T CG CK I
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYI 125
>At1g78740.1 68414.m09177 hypothetical protein
Length = 306
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 384 SIYLCLRIVVLSLSTLA-PENSSSFLPFLTKTNVG 283
+IY+C +V L LST+ P S LPFL +G
Sbjct: 94 TIYICESLVSLKLSTVTLPSVKSVSLPFLRVLKLG 128
>At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1)
(Chromaffin granule ATPase) from {Homo sapiens}
SP|Q9Y2Q0, {Mus musculus} SP|P98200, {Bos taurus}
SP|Q29449; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase; ESTs gb|T45045 and
gb|AA394473 come from this gene
Length = 1203
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 49 KTQDVHSHQRFRRPEDKAGGSRRQARRDRLHGDLVRTVQDD 171
K QD+ + R + D G RR+ RD G++VR +D+
Sbjct: 129 KKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDE 169
>At4g12050.1 68417.m01917 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 339
Score = 26.6 bits (56), Expect = 7.3
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Frame = +2
Query: 50 KPKMSIHI-KDSDD-LKTRLAEAGDKLVVIDFMATWC-----GPCKMIG 175
KPK I I +DS + L+T + E GD ++D MAT+ G C M G
Sbjct: 130 KPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMSG 178
>At5g48100.1 68418.m05942 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661197]
Length = 565
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 70 VNGHLGFLYKCTNFQT 23
+NGH GFLY C+ T
Sbjct: 189 INGHPGFLYPCSKSDT 204
>At5g18830.2 68418.m02238 squamosa promoter-binding protein-like 7
(SPL7) identical to squamosa promoter binding
protein-like 7 [Arabidopsis thaliana] GI:5931635;
contains Pfam profile PF03110: SBP domain
Length = 775
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 43 CIKTQDVHSHQRFRRPEDKAGGSRRQARRDRLHGDLVRTVQDDRALT 183
C + + H+++R R+P DK G + Q + + + V V+D + +T
Sbjct: 198 CRRKLERHNNRRKRKPVDKGGVAAEQQQVLSQNDNSVIDVEDGKDIT 244
>At5g18830.1 68418.m02237 squamosa promoter-binding protein-like 7
(SPL7) identical to squamosa promoter binding
protein-like 7 [Arabidopsis thaliana] GI:5931635;
contains Pfam profile PF03110: SBP domain
Length = 801
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 43 CIKTQDVHSHQRFRRPEDKAGGSRRQARRDRLHGDLVRTVQDDRALT 183
C + + H+++R R+P DK G + Q + + + V V+D + +T
Sbjct: 198 CRRKLERHNNRRKRKPVDKGGVAAEQQQVLSQNDNSVIDVEDGKDIT 244
>At4g18200.1 68417.m02705 purine permease family protein similar to
purine permease [Arabidopsis thaliana] GI:7620007;
contains Pfam profile PF03151: Domain of unknown
function, DUF250
Length = 1128
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -1
Query: 396 TTLVSIYLCLRIVVLSLSTLAPENSSSFLPFLTKTNVGIELMLYSLAM 253
TTL S+YLC ++V + + L+ ++F + + L++ SL +
Sbjct: 505 TTLASVYLCTGLLVSAYAYLSALAFTAFFSYFLNSQKFTPLIVSSLLL 552
>At4g05370.1 68417.m00819 hypothetical protein
Length = 149
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 436 FFLIPS*FPSAAAY-NFSLYLLVFKDSCFEFVDVSAREFV 320
F IPS + Y + S + ++FK +EF+ V+ R+F+
Sbjct: 6 FTKIPSLSAIFSVYTSLSAFTILFKTILYEFIPVNIRDFI 45
>At4g02330.1 68417.m00317 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 573
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 390 LVSIYLCLRIVVLSLSTLAPENSSS 316
LV+++L L+ + ++ TL P NSSS
Sbjct: 8 LVTLFLSLQTLFIASQTLLPSNSSS 32
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,671,424
Number of Sequences: 28952
Number of extensions: 147261
Number of successful extensions: 527
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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