Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10n03r
(326 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical pr... 28 1.8
U00056-1|AAN65308.2| 476|Caenorhabditis elegans Hypothetical pr... 27 3.2
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 4.2
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 4.2
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 4.2
AC024882-4|AAF60933.2| 338|Caenorhabditis elegans Seven tm rece... 26 5.6
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 26 7.4
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 26 7.4
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 26 7.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 26 7.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 26 7.4
AC024200-10|AAF35999.1| 284|Caenorhabditis elegans Hypothetical... 26 7.4
U49946-5|AAX55699.1| 919|Caenorhabditis elegans Diacylglycerol ... 25 9.7
U49946-4|AAC48135.1| 952|Caenorhabditis elegans Diacylglycerol ... 25 9.7
U49946-3|AAX55698.1| 796|Caenorhabditis elegans Diacylglycerol ... 25 9.7
U49946-2|AAC48134.1| 950|Caenorhabditis elegans Diacylglycerol ... 25 9.7
U49946-1|AAX55697.1| 794|Caenorhabditis elegans Diacylglycerol ... 25 9.7
U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical pr... 25 9.7
>U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical
protein T26A8.4 protein.
Length = 574
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 134 AKPKHVSPMLIMTILGFAYSSKLTTLNAVVDRIDRKPSPGL 256
+ P H +P++ I ++ S+L VV I R P PG+
Sbjct: 307 SSPPHATPVIHAPIPQASHPSQLPPPAVVVPTIQRNPGPGI 347
>U00056-1|AAN65308.2| 476|Caenorhabditis elegans Hypothetical
protein R05H11.1 protein.
Length = 476
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -3
Query: 123 IAYMRQKYESMGYYSAIDKDGKEI-----FEKKKSKWD*NYRICK 4
+ + + KY + +YS DKDGK + K SK+ NY CK
Sbjct: 78 VYFEKYKYNACVFYSWRDKDGKRTIWNNSYYLKSSKFQ-NYMFCK 121
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 77 AE*YPID--SYFCRMYAMYPRAKPKHVSPMLIMTILGFAYSSKLTTLNAVV 223
AE P++ S C P+H+SP L+++++ + +KL L A++
Sbjct: 3 AERRPVNNSSMLCNNDNNQQNTTPEHLSPNLLLSLVKLEHETKLGGLEALI 53
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 77 AE*YPID--SYFCRMYAMYPRAKPKHVSPMLIMTILGFAYSSKLTTLNAVV 223
AE P++ S C P+H+SP L+++++ + +KL L A++
Sbjct: 100 AERRPVNNSSMLCNNDNNQQNTTPEHLSPNLLLSLVKLEHETKLGGLEALI 150
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 77 AE*YPID--SYFCRMYAMYPRAKPKHVSPMLIMTILGFAYSSKLTTLNAVV 223
AE P++ S C P+H+SP L+++++ + +KL L A++
Sbjct: 224 AERRPVNNSSMLCNNDNNQQNTTPEHLSPNLLLSLVKLEHETKLGGLEALI 274
>AC024882-4|AAF60933.2| 338|Caenorhabditis elegans Seven tm
receptor protein 158 protein.
Length = 338
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 198 FELYAKPNIVIMSIGLTCFGLALGYIA 118
FELY K ++ ++ G +CFG+ + IA
Sbjct: 84 FELYPKISLFLIVGGTSCFGVTIYAIA 110
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 92 IDSYFCRMYAMYPRAKPKHVSPMLIMTILGFAYSSKLTTLNAVVDRIDR 238
I ++ C + M A+ SP L +T + F Y KL T N + +++ R
Sbjct: 261 ITNFVCELIQMLSFAQLLAFSPGLNLTSIFFLYHMKL-TYNCMTEQLSR 308
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 92 IDSYFCRMYAMYPRAKPKHVSPMLIMTILGFAYSSKLTTLNAVVDRIDR 238
I ++ C + M A+ SP L +T + F Y KL T N + +++ R
Sbjct: 261 ITNFVCELIQMLSFAQLLAFSPGLNLTSIFFLYHMKL-TYNCMTEQLSR 308
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 104 NMNQWDIILLLIKMEKRFLKRRNQNGIEIIEF 9
+M++ I+ L +K E LK +N N ++II+F
Sbjct: 219 HMHKNQIVHLDLKPENILLKAKNSNELKIIDF 250
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 104 NMNQWDIILLLIKMEKRFLKRRNQNGIEIIEF 9
+M++ I+ L +K E LK +N N ++II+F
Sbjct: 219 HMHKNQIVHLDLKPENILLKAKNSNELKIIDF 250
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 104 NMNQWDIILLLIKMEKRFLKRRNQNGIEIIEF 9
+M++ I+ L +K E LK +N N ++II+F
Sbjct: 16045 HMHKNQIVHLDLKPENILLKAKNSNELKIIDF 16076
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 104 NMNQWDIILLLIKMEKRFLKRRNQNGIEIIEF 9
+M++ I+ L +K E LK +N N ++II+F
Sbjct: 16045 HMHKNQIVHLDLKPENILLKAKNSNELKIIDF 16076
>AC024200-10|AAF35999.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9AL.7 protein.
Length = 284
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = -1
Query: 95 QWDIILLLIKMEKRFLKRRNQN 30
+W+ I +++K ++RFL+R +N
Sbjct: 76 EWNEIAVVLKRDERFLRRHRRN 97
>U49946-5|AAX55699.1| 919|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform e protein.
Length = 919
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 308 PFIENIKFCKQCQNHTMINLARVCDLCDQLQHLEWSIL 195
P + K+C C+ T L+ C++C+ H++ S L
Sbjct: 89 PCLIKRKYCCVCRKRTDDALSVECEVCEYYVHVDCSDL 126
>U49946-4|AAC48135.1| 952|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform b protein.
Length = 952
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 308 PFIENIKFCKQCQNHTMINLARVCDLCDQLQHLEWSIL 195
P + K+C C+ T L+ C++C+ H++ S L
Sbjct: 89 PCLIKRKYCCVCRKRTDDALSVECEVCEYYVHVDCSDL 126
>U49946-3|AAX55698.1| 796|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform d protein.
Length = 796
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 308 PFIENIKFCKQCQNHTMINLARVCDLCDQLQHLEWSIL 195
P + K+C C+ T L+ C++C+ H++ S L
Sbjct: 89 PCLIKRKYCCVCRKRTDDALSVECEVCEYYVHVDCSDL 126
>U49946-2|AAC48134.1| 950|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform a protein.
Length = 950
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 308 PFIENIKFCKQCQNHTMINLARVCDLCDQLQHLEWSIL 195
P + K+C C+ T L+ C++C+ H++ S L
Sbjct: 89 PCLIKRKYCCVCRKRTDDALSVECEVCEYYVHVDCSDL 126
>U49946-1|AAX55697.1| 794|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform c protein.
Length = 794
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 308 PFIENIKFCKQCQNHTMINLARVCDLCDQLQHLEWSIL 195
P + K+C C+ T L+ C++C+ H++ S L
Sbjct: 89 PCLIKRKYCCVCRKRTDDALSVECEVCEYYVHVDCSDL 126
>U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical
protein T13C2.7 protein.
Length = 292
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 78 QNNIPLIHIFVACMQCILEPNQSMS 152
QNN IH V+C Q +L SMS
Sbjct: 235 QNNTIPIHKSVSCQQLVLSRKSSMS 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,093,445
Number of Sequences: 27780
Number of extensions: 159718
Number of successful extensions: 398
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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