Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10n03f
(382 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3625|AAN12189.1| 99|Drosophila melanogaster CG32448-P... 111 2e-25
AY069510-1|AAL39655.1| 470|Drosophila melanogaster LD22971p pro... 31 0.50
AE014297-2006|AAF55167.2| 470|Drosophila melanogaster CG6276-PA... 31 0.50
BT022576-1|AAY54992.1| 657|Drosophila melanogaster IP11918p pro... 30 0.88
BT022512-1|AAY54928.1| 420|Drosophila melanogaster IP11818p pro... 30 0.88
AE014135-125|AAF59320.2| 628|Drosophila melanogaster CG11360-PA... 30 0.88
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h... 28 3.5
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d... 28 3.5
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d... 28 3.5
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA... 28 3.5
BT003784-1|AAO41467.1| 1556|Drosophila melanogaster LD26783p pro... 28 4.7
AE014296-993|AAS65076.1| 1556|Drosophila melanogaster CG5486-PC,... 28 4.7
AE014296-992|AAN12105.1| 1556|Drosophila melanogaster CG5486-PB,... 28 4.7
AE014296-991|AAF50752.2| 1556|Drosophila melanogaster CG5486-PA,... 28 4.7
>AE014296-3625|AAN12189.1| 99|Drosophila melanogaster CG32448-PA
protein.
Length = 99
Score = 111 bits (268), Expect = 2e-25
Identities = 49/84 (58%), Positives = 62/84 (73%)
Frame = +3
Query: 51 MSKPHDDKPGEGLRSMRSTTAFRVVNFELYAKPNIVIMSIGLTCFGLALGYIAYMRQKYE 230
MS+ PG+G+RSMRST FR++NFELY KPN +IM +GLT GYIAYMR KYE
Sbjct: 15 MSEGKQQGPGDGIRSMRSTGVFRLINFELYTKPNKIIMGLGLTAIAGVFGYIAYMRYKYE 74
Query: 231 SMGYYSAIDKDGKEIFEKKKSKWD 302
S+GYY A+ ++G+E F KKKS W+
Sbjct: 75 SLGYYVAVQENGQEKFIKKKSNWE 98
>AY069510-1|AAL39655.1| 470|Drosophila melanogaster LD22971p
protein.
Length = 470
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1
Query: 238 PIDSYFCRMYAMYPRAKPKHVSPMLIMTILGFAYSSKLTTLNAVVDRIDRKPSPGLSSCG 59
P SYF RM+ ++P + KH P + T + A + L+ L++ + R PG SS G
Sbjct: 100 PCWSYFDRMFFLHPYLRKKHQQPKSLDTQVQDAL-AHLSNLSSRMQRERSVTIPGSSSIG 158
>AE014297-2006|AAF55167.2| 470|Drosophila melanogaster CG6276-PA
protein.
Length = 470
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1
Query: 238 PIDSYFCRMYAMYPRAKPKHVSPMLIMTILGFAYSSKLTTLNAVVDRIDRKPSPGLSSCG 59
P SYF RM+ ++P + KH P + T + A + L+ L++ + R PG SS G
Sbjct: 100 PCWSYFDRMFFLHPYLRKKHQQPKSLDTQVQDAL-AHLSNLSSRMQRERSVTIPGSSSIG 158
>BT022576-1|AAY54992.1| 657|Drosophila melanogaster IP11918p
protein.
Length = 657
Score = 30.3 bits (65), Expect = 0.88
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 40 FCKQCQNHTMINLARVCDLCDQLQHLEWSIL 132
FC +C NH +++ VC +C+ + + IL
Sbjct: 626 FCMECANHICLSMDAVCPVCNSIVYHAMRIL 656
>BT022512-1|AAY54928.1| 420|Drosophila melanogaster IP11818p
protein.
Length = 420
Score = 30.3 bits (65), Expect = 0.88
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 40 FCKQCQNHTMINLARVCDLCDQLQHLEWSIL 132
FC +C NH +++ VC +C+ + + IL
Sbjct: 389 FCMECANHICLSMDAVCPVCNSIVYHAMRIL 419
>AE014135-125|AAF59320.2| 628|Drosophila melanogaster CG11360-PA
protein.
Length = 628
Score = 30.3 bits (65), Expect = 0.88
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 40 FCKQCQNHTMINLARVCDLCDQLQHLEWSIL 132
FC +C NH +++ VC +C+ + + IL
Sbjct: 597 FCMECANHICLSMDAVCPVCNSIVYHAMRIL 627
>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
homolog protein.
Length = 3584
Score = 28.3 bits (60), Expect = 3.5
Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 58 NHTMI--NLARVCDLCDQLQHLEW 123
NH ++ NL + C++C+ H++W
Sbjct: 3089 NHILVLPNLVKFCEICESRDHIKW 3112
>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 28.3 bits (60), Expect = 3.5
Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 58 NHTMI--NLARVCDLCDQLQHLEW 123
NH ++ NL + C++C+ H++W
Sbjct: 3088 NHILVLPNLVKFCEICESRDHIKW 3111
>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 28.3 bits (60), Expect = 3.5
Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 58 NHTMI--NLARVCDLCDQLQHLEW 123
NH ++ NL + C++C+ H++W
Sbjct: 3088 NHILVLPNLVKFCEICESRDHIKW 3111
>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
protein.
Length = 3583
Score = 28.3 bits (60), Expect = 3.5
Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 58 NHTMI--NLARVCDLCDQLQHLEW 123
NH ++ NL + C++C+ H++W
Sbjct: 3088 NHILVLPNLVKFCEICESRDHIKW 3111
>BT003784-1|AAO41467.1| 1556|Drosophila melanogaster LD26783p
protein.
Length = 1556
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 33 YQIL*TMSKPHDDKPGEGLRSMRSTTAFRVVNFELYAKPNIVIMSIG 173
Y+ + +PHD+K L ++ S + V FE K +++++ G
Sbjct: 48 YEKFELLLQPHDNKDLVNLNALESQLMYEVAGFEPQLKNHLILLPSG 94
>AE014296-993|AAS65076.1| 1556|Drosophila melanogaster CG5486-PC,
isoform C protein.
Length = 1556
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 33 YQIL*TMSKPHDDKPGEGLRSMRSTTAFRVVNFELYAKPNIVIMSIG 173
Y+ + +PHD+K L ++ S + V FE K +++++ G
Sbjct: 48 YEKFELLLQPHDNKDLVNLNALESQLMYEVAGFEPQLKNHLILLPSG 94
>AE014296-992|AAN12105.1| 1556|Drosophila melanogaster CG5486-PB,
isoform B protein.
Length = 1556
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 33 YQIL*TMSKPHDDKPGEGLRSMRSTTAFRVVNFELYAKPNIVIMSIG 173
Y+ + +PHD+K L ++ S + V FE K +++++ G
Sbjct: 48 YEKFELLLQPHDNKDLVNLNALESQLMYEVAGFEPQLKNHLILLPSG 94
>AE014296-991|AAF50752.2| 1556|Drosophila melanogaster CG5486-PA,
isoform A protein.
Length = 1556
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 33 YQIL*TMSKPHDDKPGEGLRSMRSTTAFRVVNFELYAKPNIVIMSIG 173
Y+ + +PHD+K L ++ S + V FE K +++++ G
Sbjct: 48 YEKFELLLQPHDNKDLVNLNALESQLMYEVAGFEPQLKNHLILLPSG 94
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,701,403
Number of Sequences: 53049
Number of extensions: 302345
Number of successful extensions: 748
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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