Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n01r
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.86 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    24   1.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.0  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 147 KLDLKTYPIVSKVYENLLKEELFQA 73
           K+D   YP+V+ V +NL+K  +  A
Sbjct: 158 KIDEHLYPVVALVVKNLIKPTILGA 182


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 215 MQ*APDVFANKSLSVCSPLSVQYFVKL-RNFS 307
           MQ  P+  +NKS S+  PLS+    +L  NFS
Sbjct: 26  MQDEPENLSNKSNSITVPLSISTGQRLPANFS 57


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 440 SSMYCIIAIDSTKVTPSISRAGTFCAGLMAL-YSSVSCLPVFTISTGRSSKGMLFACSI 613
           S ++C++  +  +    +S+A +FC  + AL Y SV+   +  + T  ++  +L   S+
Sbjct: 20  SEIFCLVNFNHRESYFRLSKAKSFCTFVAALVYCSVTFFALSELLTDLATSILLKVSSL 78


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 273 ERGLQTLNDLLAKTSGAYCIGDQITL 196
           ERG+ T N ++   S   C GD++ +
Sbjct: 161 ERGILTANRMIPGPSIQVCEGDKVVI 186


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 273 ERGLQTLNDLLAKTSGAYCIGDQITL 196
           ERG+ T N ++   S   C GD++ +
Sbjct: 161 ERGILTANRMIPGPSIQVCEGDKVVI 186


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/12 (66%), Positives = 12/12 (100%)
 Frame = -3

Query: 236 KHQELTASEIKL 201
           +H++LTA+EIKL
Sbjct: 116 RHEKLTAAEIKL 127


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 546 AVYQFLQYPPDVLRKVCFLHVALLEHATNTKTANRRAKSHDFQ 674
           A++   +YP   +R+   L + L E        NRRAK    Q
Sbjct: 86  ALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,560
Number of Sequences: 336
Number of extensions: 3856
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)